RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 SERF2P84101 59 aa9.03□□□□□ -0.96
HDAC1-209ENST00000484305 OR5I1Q13606 314 aa9.03□□□□□ -0.96
HDAC1-209ENST00000484305 RPL7L1Q6DKI1 246 aaKnown RBP9.03□□□□□ -0.96
HDAC1-209ENST00000484305 ZNF680Q8NEM1 530 aa9.03□□□□□ -0.96
HDAC1-209ENST00000484305 RPH3ALQ9UNE2 315 aa9.03□□□□□ -0.96
HDAC1-209ENST00000484305 KLF12Q9Y4X4 402 aa9.03□□□□□ -0.96
HDAC1-209ENST00000484305 IGLV2-18A0A075B6J9 118 aa9.02□□□□□ -0.97
HDAC1-209ENST00000484305 FAM74A1Q5RGS3 127 aa9.02□□□□□ -0.97
HDAC1-209ENST00000484305 CMTM2Q8TAZ6 248 aa9.02□□□□□ -0.97
HDAC1-209ENST00000484305 TRAV26-1A0A087WT03 109 aa9.01□□□□□ -0.97
HDAC1-209ENST00000484305 MBP02144 154 aa9.01□□□□□ -0.97
HDAC1-209ENST00000484305 GCHFRP30047 84 aa9.01□□□□□ -0.97
HDAC1-209ENST00000484305 TCL1AP56279 114 aa9.01□□□□□ -0.97
HDAC1-209ENST00000484305 GNG5P63218 68 aa9.01□□□□□ -0.97
HDAC1-209ENST00000484305 IBA57Q5T440 356 aaKnown RBP9.01□□□□□ -0.97
HDAC1-209ENST00000484305 GOLT1AQ6ZVE7 132 aa9.01□□□□□ -0.97
HDAC1-209ENST00000484305 SSX7Q7RTT5 188 aa9.01□□□□□ -0.97
HDAC1-209ENST00000484305 TMED6Q8WW62 240 aa9.01□□□□□ -0.97
HDAC1-209ENST00000484305 TMPRSS5Q9H3S3 457 aa9.01□□□□□ -0.97
HDAC1-209ENST00000484305 LENEPQ9Y5L5 61 aa9.01□□□□□ -0.97
HDAC1-209ENST00000484305 MUC4Q99102 2169 aa9□□□□□ -0.97
HDAC1-209ENST00000484305 TRGV1A0A0A0MS02 117 aa9□□□□□ -0.97
HDAC1-209ENST00000484305 TRAV8-1A0A0A6YYK1 113 aa9□□□□□ -0.97
HDAC1-209ENST00000484305 BORCS7-ASMTA0A0B4J1R7 106 aa9□□□□□ -0.97
HDAC1-209ENST00000484305 A0A0J9YY99 117 aa9□□□□□ -0.97
HDAC1-209ENST00000484305 LGALS9BQ3B8N2 356 aa9□□□□□ -0.97
HDAC1-209ENST00000484305 MUC21Q5SSG8 566 aa9□□□□□ -0.97
HDAC1-209ENST00000484305 Q6AWC8 147 aa9□□□□□ -0.97
HDAC1-209ENST00000484305 Q6ZR54 194 aa9□□□□□ -0.97
HDAC1-209ENST00000484305 ARL6IP6Q8N6S5 226 aa9□□□□□ -0.97
HDAC1-209ENST00000484305 SUN5Q8TC36 379 aa9□□□□□ -0.97
HDAC1-209ENST00000484305 GNPNAT1Q96EK6 184 aaPredicted RBP9□□□□□ -0.97
HDAC1-209ENST00000484305 TVP23CQ96ET8 276 aa9□□□□□ -0.97
HDAC1-209ENST00000484305 ATG101Q9BSB4 218 aa9□□□□□ -0.97
HDAC1-209ENST00000484305 ACTR3CQ9C0K3 210 aaPredicted RBP9□□□□□ -0.97
HDAC1-209ENST00000484305 TRGV2A0A075B6R0 118 aa8.99□□□□□ -0.97
HDAC1-209ENST00000484305 SMLR1H3BR10 107 aa8.99□□□□□ -0.97
HDAC1-209ENST00000484305 ARPC5O15511 151 aa8.99□□□□□ -0.97
HDAC1-209ENST00000484305 SPINK4O60575 86 aa8.99□□□□□ -0.97
HDAC1-209ENST00000484305 ZNF726P1Q15940 193 aa8.99□□□□□ -0.97
HDAC1-209ENST00000484305 ST6GAL2Q96JF0 529 aa8.99□□□□□ -0.97
HDAC1-209ENST00000484305 SGK494Q96LW2 274 aa8.99□□□□□ -0.97
HDAC1-209ENST00000484305 C18orf15Q96N68 181 aa8.99□□□□□ -0.97
HDAC1-209ENST00000484305 ARPC5LQ9BPX5 153 aa8.99□□□□□ -0.97
HDAC1-209ENST00000484305 RTL8CO15255 209 aa8.98□□□□□ -0.97
HDAC1-209ENST00000484305 CXorf1O96002 111 aa8.98□□□□□ -0.97
HDAC1-209ENST00000484305 FAM3BP58499 235 aaPredicted RBP8.98□□□□□ -0.97
HDAC1-209ENST00000484305 CYTL1Q9NRR1 136 aa8.98□□□□□ -0.97
HDAC1-209ENST00000484305 MRPL16Q9NX20 251 aaKnown RBP8.98□□□□□ -0.97
HDAC1-209ENST00000484305 MDFICQ9P1T7 246 aa8.98□□□□□ -0.97
HDAC1-209ENST00000484305 LINC00588Q9Y4M8 146 aa8.98□□□□□ -0.97
HDAC1-209ENST00000484305 GGTLC3B5MD39 225 aa8.97□□□□□ -0.97
HDAC1-209ENST00000484305 F6UZH7 168 aa8.97□□□□□ -0.97
HDAC1-209ENST00000484305 TCRAP04437 139 aa8.97□□□□□ -0.97
HDAC1-209ENST00000484305 CCL18P55774 89 aa8.97□□□□□ -0.97
HDAC1-209ENST00000484305 SUMO1P63165 101 aaKnown RBP8.97□□□□□ -0.97
HDAC1-209ENST00000484305 ZNF415Q09FC8 603 aa8.97□□□□□ -0.97
HDAC1-209ENST00000484305 TMEM183BQ1AE95 376 aa8.97□□□□□ -0.97
HDAC1-209ENST00000484305 FAM159AQ6UWV7 190 aa8.97□□□□□ -0.97
HDAC1-209ENST00000484305 LINC00336Q6ZUF6 198 aa8.97□□□□□ -0.97
HDAC1-209ENST00000484305 TMEM183AQ8IXX5 376 aa8.97□□□□□ -0.97
HDAC1-209ENST00000484305 C5orf17Q8NAS9 161 aa8.97□□□□□ -0.97
HDAC1-209ENST00000484305 TREM1Q9NP99 234 aa8.97□□□□□ -0.97
HDAC1-209ENST00000484305 TMEM167BQ9NRX6 74 aa8.97□□□□□ -0.97
HDAC1-209ENST00000484305 DNAH2Q9P225 4427 aa8.96□□□□□ -0.97
HDAC1-209ENST00000484305 H3BNG1 76 aa8.96□□□□□ -0.98
HDAC1-209ENST00000484305 TAAR5O14804 337 aa8.96□□□□□ -0.98
HDAC1-209ENST00000484305 IGHV3-53P01767 116 aa8.96□□□□□ -0.98
HDAC1-209ENST00000484305 IQCF2Q8IXL9 164 aa8.96□□□□□ -0.98
HDAC1-209ENST00000484305 ZNRF2Q8NHG8 242 aa8.96□□□□□ -0.98
HDAC1-209ENST00000484305 VSIG2Q96IQ7 327 aa8.96□□□□□ -0.98
HDAC1-209ENST00000484305 NAGKQ9UJ70 344 aa8.96□□□□□ -0.98
HDAC1-209ENST00000484305 EPDR1Q9UM22 224 aa8.96□□□□□ -0.98
HDAC1-209ENST00000484305 CTXND1A0A1B0GTU2 59 aa8.95□□□□□ -0.98
HDAC1-209ENST00000484305 SERTM2A0A1B0GWG4 89 aa8.95□□□□□ -0.98
HDAC1-209ENST00000484305 GNRH2O43555 120 aa8.95□□□□□ -0.98
HDAC1-209ENST00000484305 IGLV2-11P01706 119 aa8.95□□□□□ -0.98
HDAC1-209ENST00000484305 TDRG1Q3Y452 100 aa8.95□□□□□ -0.98
HDAC1-209ENST00000484305 OR11H4Q8NGC9 324 aa8.95□□□□□ -0.98
HDAC1-209ENST00000484305 C8orf49Q96NF6 230 aa8.95□□□□□ -0.98
HDAC1-209ENST00000484305 TRGV11A0A075B6L2 103 aa8.94□□□□□ -0.98
HDAC1-209ENST00000484305 TRAV21A0A0B4J279 112 aa8.94□□□□□ -0.98
HDAC1-209ENST00000484305 A0A1W2PRE2 83 aa8.94□□□□□ -0.98
HDAC1-209ENST00000484305 PRSS29PA6NIE9 313 aa8.94□□□□□ -0.98
HDAC1-209ENST00000484305 K7EQM0 130 aa8.94□□□□□ -0.98
HDAC1-209ENST00000484305 FGF8P55075 233 aaPredicted RBP8.94□□□□□ -0.98
HDAC1-209ENST00000484305 ESRGQ1W209 222 aa8.94□□□□□ -0.98
HDAC1-209ENST00000484305 AKR1C8PQ5T2L2 129 aa8.94□□□□□ -0.98
HDAC1-209ENST00000484305 SPXQ9BT56 116 aa8.94□□□□□ -0.98
HDAC1-209ENST00000484305 PSG8Q9UQ74 426 aa8.94□□□□□ -0.98
HDAC1-209ENST00000484305 HECTD4Q9Y4D8 3996 aa8.94□□□□□ -0.98
HDAC1-209ENST00000484305 DNAH17Q9UFH2 4485 aa8.94□□□□□ -0.98
HDAC1-209ENST00000484305 IGHV3-16A0A0C4DH30 117 aa8.93□□□□□ -0.98
HDAC1-209ENST00000484305 NBDYA0A0U1RRE5 68 aa8.93□□□□□ -0.98
HDAC1-209ENST00000484305 A0A1B0GVY2 172 aa8.93□□□□□ -0.98
HDAC1-209ENST00000484305 ZNF80P51504 273 aaPredicted RBP8.93□□□□□ -0.98
HDAC1-209ENST00000484305 UBE2G2P60604 165 aa8.93□□□□□ -0.98
HDAC1-209ENST00000484305 FLI1Q01543 452 aaPredicted RBP8.93□□□□□ -0.98
HDAC1-209ENST00000484305 FHL2Q14192 279 aa8.93□□□□□ -0.98
HDAC1-209ENST00000484305 PRNTQ86SH4 94 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms