RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 SMIM12Q96EX1 92 aa15.08■□□□□ 0
VPS16-207ENST00000481812 DERL1Q9BUN8 251 aa15.08■□□□□ 0
VPS16-207ENST00000481812 PRKDCP78527 4128 aaKnown RBP15.08■□□□□ 0
VPS16-207ENST00000481812 NBEAL2Q6ZNJ1 2754 aa15.07■□□□□ 0
VPS16-207ENST00000481812 SPRY2O43597 315 aa15.07■□□□□ 0
VPS16-207ENST00000481812 KIR3DS1Q14943 382 aa15.07■□□□□ 0
VPS16-207ENST00000481812 SMUG1Q53HV7 270 aa15.07■□□□□ 0
VPS16-207ENST00000481812 Q6AWC8 147 aa15.07■□□□□ 0
VPS16-207ENST00000481812 ZNF705AQ6ZN79 300 aaPredicted RBP15.07■□□□□ 0
VPS16-207ENST00000481812 TMEM183AQ8IXX5 376 aa15.07■□□□□ 0
VPS16-207ENST00000481812 C1orf158Q8N1D5 194 aa15.07■□□□□ 0
VPS16-207ENST00000481812 ASCL2Q99929 193 aa15.07■□□□□ 0
VPS16-207ENST00000481812 OVOL2Q9BRP0 275 aa15.07■□□□□ 0
VPS16-207ENST00000481812 GOLT1BQ9Y3E0 138 aa15.07■□□□□ 0
VPS16-207ENST00000481812 LINC00862A6NCI5 91 aa15.06■□□□□ 0
VPS16-207ENST00000481812 ZNF324O75467 553 aaPredicted RBP15.06■□□□□ 0
VPS16-207ENST00000481812 SRSF3P84103 164 aaKnown RBP15.06■□□□□ 0
VPS16-207ENST00000481812 PRR9Q5T870 116 aa15.06■□□□□ 0
VPS16-207ENST00000481812 BAGE2Q86Y30 109 aa15.06■□□□□ 0
VPS16-207ENST00000481812 NEU1Q99519 415 aa15.06■□□□□ 0
VPS16-207ENST00000481812 MLST8Q9BVC4 326 aa15.06■□□□□ 0
VPS16-207ENST00000481812 PARLQ9H300 379 aa15.06■□□□□ 0
VPS16-207ENST00000481812 ZMAT4Q9H898 229 aa15.06■□□□□ 0
VPS16-207ENST00000481812 C9JCJ5 164 aa15.05■□□□□ -0
VPS16-207ENST00000481812 J3KRW8 73 aa15.05■□□□□ -0
VPS16-207ENST00000481812 RNASE4P34096 147 aaKnown RBP15.05■□□□□ -0
VPS16-207ENST00000481812 BTN1A1Q13410 526 aa15.05■□□□□ -0
VPS16-207ENST00000481812 C8orf49Q96NF6 230 aa15.05■□□□□ -0
VPS16-207ENST00000481812 NIPSNAP3BQ9BS92 247 aa15.05■□□□□ -0
VPS16-207ENST00000481812 TRAV12-3A0A0B4J271 114 aa15.04■□□□□ -0
VPS16-207ENST00000481812 H7BYZ3 331 aa15.04■□□□□ -0
VPS16-207ENST00000481812 RBMY1A1P0DJD3 496 aaKnown RBP15.04■□□□□ -0
VPS16-207ENST00000481812 RBMY1CP0DJD4 496 aa15.04■□□□□ -0
VPS16-207ENST00000481812 RBMY1FQ15415 496 aaKnown RBP15.04■□□□□ -0
VPS16-207ENST00000481812 TRAV21A0A0B4J279 112 aa15.03■□□□□ -0
VPS16-207ENST00000481812 SMIM9A6NGZ8 99 aa15.03■□□□□ -0
VPS16-207ENST00000481812 C9JQL5 133 aa15.03■□□□□ -0
VPS16-207ENST00000481812 GNG4P50150 75 aa15.03■□□□□ -0
VPS16-207ENST00000481812 CENPWQ5EE01 88 aa15.03■□□□□ -0
VPS16-207ENST00000481812 UQCC3Q6UW78 93 aa15.03■□□□□ -0
VPS16-207ENST00000481812 EIF4E3Q8N5X7 224 aaKnown RBP15.03■□□□□ -0
VPS16-207ENST00000481812 LINC00467Q9BRT7 94 aa15.03■□□□□ -0
VPS16-207ENST00000481812 TRBV20OR9-2A0A075B6H5 130 aa15.02■□□□□ -0
VPS16-207ENST00000481812 GCGP01275 180 aa15.02■□□□□ -0
VPS16-207ENST00000481812 PFN1P07737 140 aaKnown RBP15.02■□□□□ -0
VPS16-207ENST00000481812 FAM74A3Q4VXF1 159 aa15.02■□□□□ -0
VPS16-207ENST00000481812 OR11H2Q8NH07 326 aa15.02■□□□□ -0
VPS16-207ENST00000481812 PYGO2Q9BRQ0 406 aa15.02■□□□□ -0
VPS16-207ENST00000481812 TMEM208Q9BTX3 173 aa15.02■□□□□ -0
VPS16-207ENST00000481812 LY96Q9Y6Y9 160 aa15.02■□□□□ -0
VPS16-207ENST00000481812 DNAH9Q9NYC9 4486 aa15.02□□□□□ -0.01
VPS16-207ENST00000481812 FABP5P3A8MUU1 101 aa15.01□□□□□ -0.01
VPS16-207ENST00000481812 IGLV2-8P01709 118 aa15.01□□□□□ -0.01
VPS16-207ENST00000481812 ZNF80P51504 273 aaPredicted RBP15.01□□□□□ -0.01
VPS16-207ENST00000481812 ZC2HC1AQ96GY0 325 aa15.01□□□□□ -0.01
VPS16-207ENST00000481812 LINC01587Q99440 93 aa15.01□□□□□ -0.01
VPS16-207ENST00000481812 X6R8D5 127 aa15.01□□□□□ -0.01
VPS16-207ENST00000481812 MIFP14174 115 aa15□□□□□ -0.01
VPS16-207ENST00000481812 CEBPGP53567 150 aa15□□□□□ -0.01
VPS16-207ENST00000481812 ZNF674Q2M3X9 581 aa15□□□□□ -0.01
VPS16-207ENST00000481812 SMIM7Q9BQ49 75 aa15□□□□□ -0.01
VPS16-207ENST00000481812 RETNQ9HD89 108 aa15□□□□□ -0.01
VPS16-207ENST00000481812 BIN3Q9NQY0 253 aa15□□□□□ -0.01
VPS16-207ENST00000481812 ZNF727A8MUV8 499 aa14.99□□□□□ -0.01
VPS16-207ENST00000481812 COL7A1Q02388 2944 aa14.98□□□□□ -0.01
VPS16-207ENST00000481812 IGHV3OR16-12A0A075B7B8 117 aa14.98□□□□□ -0.01
VPS16-207ENST00000481812 IGHV1OR15-1A0A075B7D0 117 aa14.98□□□□□ -0.01
VPS16-207ENST00000481812 CRIP1P50238 77 aa14.98□□□□□ -0.01
VPS16-207ENST00000481812 TDRG1Q3Y452 100 aa14.98□□□□□ -0.01
VPS16-207ENST00000481812 SOHLH1Q5JUK2 328 aa14.98□□□□□ -0.01
VPS16-207ENST00000481812 FAM162BQ5T6X4 162 aa14.98□□□□□ -0.01
VPS16-207ENST00000481812 COMMD7Q86VX2 200 aa14.98□□□□□ -0.01
VPS16-207ENST00000481812 NHLRC2Q8NBF2 726 aa14.98□□□□□ -0.01
VPS16-207ENST00000481812 TENM3Q9P273 2699 aa14.98□□□□□ -0.01
VPS16-207ENST00000481812 RRN3P1Q2M238 152 aa14.97□□□□□ -0.01
VPS16-207ENST00000481812 ANXA2RQ3ZCQ2 193 aa14.97□□□□□ -0.01
VPS16-207ENST00000481812 Q6ZQT7 251 aa14.97□□□□□ -0.01
VPS16-207ENST00000481812 FAM159AQ6UWV7 190 aa14.96□□□□□ -0.01
VPS16-207ENST00000481812 ZNF493Q6ZR52 646 aa14.96□□□□□ -0.01
VPS16-207ENST00000481812 OCC1Q8TAD7 63 aa14.96□□□□□ -0.01
VPS16-207ENST00000481812 KCNS1Q96KK3 526 aa14.96□□□□□ -0.01
VPS16-207ENST00000481812 SH2D1AO60880 128 aa14.95□□□□□ -0.02
VPS16-207ENST00000481812 TMEM241Q24JQ0 296 aa14.95□□□□□ -0.02
VPS16-207ENST00000481812 Q8NAQ8 132 aa14.95□□□□□ -0.02
VPS16-207ENST00000481812 HUWE1Q7Z6Z7 4374 aaKnown RBP14.95□□□□□ -0.02
VPS16-207ENST00000481812 TMEM189A5PLL7 270 aa14.94□□□□□ -0.02
VPS16-207ENST00000481812 PGPEP1LA6NFU8 196 aa14.94□□□□□ -0.02
VPS16-207ENST00000481812 ZNF705GA8MUZ8 300 aaPredicted RBP14.94□□□□□ -0.02
VPS16-207ENST00000481812 SFTA3P0C7M3 94 aa14.94□□□□□ -0.02
VPS16-207ENST00000481812 MGST1P10620 155 aaKnown RBP14.94□□□□□ -0.02
VPS16-207ENST00000481812 TMEM263Q8WUH6 116 aaKnown RBP14.94□□□□□ -0.02
VPS16-207ENST00000481812 C11orf68Q9H3H3 251 aaKnown RBP14.94□□□□□ -0.02
VPS16-207ENST00000481812 C11orf21Q9P2W6 132 aa14.94□□□□□ -0.02
VPS16-207ENST00000481812 C16orf74Q96GX8 76 aa14.93□□□□□ -0.02
VPS16-207ENST00000481812 NAT8Q9UHE5 227 aa14.93□□□□□ -0.02
VPS16-207ENST00000481812 IGHV4-28A0A0C4DH34 117 aa14.92□□□□□ -0.02
VPS16-207ENST00000481812 C19orf71A6NCJ1 209 aa14.92□□□□□ -0.02
VPS16-207ENST00000481812 K7EN84 100 aa14.92□□□□□ -0.02
VPS16-207ENST00000481812 AZU1P20160 251 aa14.92□□□□□ -0.02
VPS16-207ENST00000481812 LINC01559Q495D7 138 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms