RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	CA1	P00915	261 aa	Predicted RBP	11.16	□□□□□ -0.62
HDLBP-238	ENST00000479894	S100A9	P06702	114 aa	Known RBP	11.16	□□□□□ -0.62
HDLBP-238	ENST00000479894	ZNF124	Q15973	351 aa		11.16	□□□□□ -0.62
HDLBP-238	ENST00000479894	GNG13	Q9P2W3	67 aa		11.16	□□□□□ -0.62
HDLBP-238	ENST00000479894	LENEP	Q9Y5L5	61 aa		11.16	□□□□□ -0.62
HDLBP-238	ENST00000479894	NACA	E9PAV3	2078 aa		11.16	□□□□□ -0.62
HDLBP-238	ENST00000479894		A0A1B0GV50	99 aa		11.15	□□□□□ -0.62
HDLBP-238	ENST00000479894		F6UB75	175 aa		11.15	□□□□□ -0.62
HDLBP-238	ENST00000479894	TCRA	P04437	139 aa		11.15	□□□□□ -0.62
HDLBP-238	ENST00000479894	RBMY1A1	P0DJD3	496 aa	Known RBP	11.15	□□□□□ -0.62
HDLBP-238	ENST00000479894	RBMY1C	P0DJD4	496 aa		11.15	□□□□□ -0.62
HDLBP-238	ENST00000479894	MIF	P14174	115 aa		11.15	□□□□□ -0.62
HDLBP-238	ENST00000479894	RBMY1F	Q15415	496 aa	Known RBP	11.15	□□□□□ -0.62
HDLBP-238	ENST00000479894	CYB561D1	Q8N8Q1	229 aa		11.15	□□□□□ -0.62
HDLBP-238	ENST00000479894	LYPD6B	Q8NI32	183 aa		11.15	□□□□□ -0.62
HDLBP-238	ENST00000479894	NDFIP1	Q9BT67	221 aa		11.15	□□□□□ -0.62
HDLBP-238	ENST00000479894	IGHV4-28	A0A0C4DH34	117 aa		11.14	□□□□□ -0.63
HDLBP-238	ENST00000479894	GGTLC3	B5MD39	225 aa		11.14	□□□□□ -0.63
HDLBP-238	ENST00000479894	PDE6D	O43924	150 aa		11.14	□□□□□ -0.63
HDLBP-238	ENST00000479894	CDKN1B	P46527	198 aa		11.14	□□□□□ -0.63
HDLBP-238	ENST00000479894	ZNF138	P52744	262 aa		11.14	□□□□□ -0.63
HDLBP-238	ENST00000479894	C1orf134	Q5TEV5	83 aa		11.14	□□□□□ -0.63
HDLBP-238	ENST00000479894	GDF5OS	Q5U4N7	250 aa		11.14	□□□□□ -0.63
HDLBP-238	ENST00000479894	GOLT1A	Q6ZVE7	132 aa		11.14	□□□□□ -0.63
HDLBP-238	ENST00000479894	VAX2	Q9UIW0	290 aa		11.14	□□□□□ -0.63
HDLBP-238	ENST00000479894	YTHDF2	Q9Y5A9	579 aa	Known RBP	11.14	□□□□□ -0.63
HDLBP-238	ENST00000479894	DEFB131B	A0A096LNP1	70 aa		11.13	□□□□□ -0.63
HDLBP-238	ENST00000479894	PRAC2	D3DTV9	90 aa		11.13	□□□□□ -0.63
HDLBP-238	ENST00000479894	IGKV3-20	P01619	116 aa		11.13	□□□□□ -0.63
HDLBP-238	ENST00000479894	BCL2	P10415	239 aa		11.13	□□□□□ -0.63
HDLBP-238	ENST00000479894	MEF2B	Q02080	365 aa	Predicted RBP	11.13	□□□□□ -0.63
HDLBP-238	ENST00000479894	SAPCD1	Q5SSQ6	148 aa		11.13	□□□□□ -0.63
HDLBP-238	ENST00000479894	C20orf144	Q9BQM9	153 aa		11.13	□□□□□ -0.63
HDLBP-238	ENST00000479894	AGPAT4-IT1	Q9H0P7	198 aa		11.13	□□□□□ -0.63
HDLBP-238	ENST00000479894	RPH3AL	Q9UNE2	315 aa		11.13	□□□□□ -0.63
HDLBP-238	ENST00000479894	GOLT1B	Q9Y3E0	138 aa		11.13	□□□□□ -0.63
HDLBP-238	ENST00000479894	IGLV2-18	A0A075B6J9	118 aa		11.12	□□□□□ -0.63
HDLBP-238	ENST00000479894	PEX7	O00628	323 aa		11.12	□□□□□ -0.63
HDLBP-238	ENST00000479894	NDUFS6	O75380	124 aa	Known RBP	11.12	□□□□□ -0.63
HDLBP-238	ENST00000479894	INS	P01308	110 aa		11.12	□□□□□ -0.63
HDLBP-238	ENST00000479894	CCL20	P78556	96 aa		11.12	□□□□□ -0.63
HDLBP-238	ENST00000479894	CCDC28A	Q8IWP9	274 aa		11.12	□□□□□ -0.63
HDLBP-238	ENST00000479894	TMEM256	Q8N2U0	113 aa		11.12	□□□□□ -0.63
HDLBP-238	ENST00000479894	TMEM75	Q8N9X5	138 aa		11.12	□□□□□ -0.63
HDLBP-238	ENST00000479894	FMC1	Q96HJ9	113 aa		11.12	□□□□□ -0.63
HDLBP-238	ENST00000479894	ZNF492	Q9P255	531 aa		11.12	□□□□□ -0.63
HDLBP-238	ENST00000479894	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	11.11	□□□□□ -0.63
HDLBP-238	ENST00000479894	IGKV2D-40	P01614	121 aa	Predicted RBP	11.11	□□□□□ -0.63
HDLBP-238	ENST00000479894	ZNF705D	P0CH99	300 aa	Predicted RBP	11.11	□□□□□ -0.63
HDLBP-238	ENST00000479894	ZNF705B	P0CI00	300 aa	Predicted RBP	11.11	□□□□□ -0.63
HDLBP-238	ENST00000479894	UBE2G1	P62253	170 aa		11.11	□□□□□ -0.63
HDLBP-238	ENST00000479894	AMTN	Q6UX39	209 aa		11.11	□□□□□ -0.63
HDLBP-238	ENST00000479894	IGF2BP2-AS1	Q96M15	143 aa		11.11	□□□□□ -0.63
HDLBP-238	ENST00000479894	RBFOX3	A6NFN3	312 aa		11.1	□□□□□ -0.63
HDLBP-238	ENST00000479894	GPX1	P07203	203 aa		11.1	□□□□□ -0.63
HDLBP-238	ENST00000479894	CT45A10	P0DMU9	189 aa		11.1	□□□□□ -0.63
HDLBP-238	ENST00000479894	CRISP2	P16562	243 aa		11.1	□□□□□ -0.63
HDLBP-238	ENST00000479894	AKR1C3	P42330	323 aa		11.1	□□□□□ -0.63
HDLBP-238	ENST00000479894	DEFB1	P60022	68 aa		11.1	□□□□□ -0.63
HDLBP-238	ENST00000479894	UBE2DNL	Q8IWF7	75 aa		11.1	□□□□□ -0.63
HDLBP-238	ENST00000479894	VGLL1	Q99990	258 aa		11.1	□□□□□ -0.63
HDLBP-238	ENST00000479894	TMEM208	Q9BTX3	173 aa		11.1	□□□□□ -0.63
HDLBP-238	ENST00000479894	SMDT1	Q9H4I9	107 aa		11.1	□□□□□ -0.63
HDLBP-238	ENST00000479894	XCL2	Q9UBD3	114 aa		11.1	□□□□□ -0.63
HDLBP-238	ENST00000479894	ZFP30	Q9Y2G7	519 aa		11.1	□□□□□ -0.63
HDLBP-238	ENST00000479894	DNAH5	Q8TE73	4624 aa		11.1	□□□□□ -0.63
HDLBP-238	ENST00000479894	TRBV6-1	A0A0K0K1D8	114 aa		11.09	□□□□□ -0.63
HDLBP-238	ENST00000479894	SMIM9	A6NGZ8	99 aa		11.09	□□□□□ -0.63
HDLBP-238	ENST00000479894	GNG5	P63218	68 aa		11.09	□□□□□ -0.63
HDLBP-238	ENST00000479894	FLI1	Q01543	452 aa	Predicted RBP	11.09	□□□□□ -0.63
HDLBP-238	ENST00000479894	ERCC8	Q13216	396 aa		11.09	□□□□□ -0.63
HDLBP-238	ENST00000479894	NIPSNAP3B	Q9BS92	247 aa		11.09	□□□□□ -0.63
HDLBP-238	ENST00000479894	EIF5A2	Q9GZV4	153 aa	Known RBP	11.09	□□□□□ -0.63
HDLBP-238	ENST00000479894	SLC35B3	Q9H1N7	401 aa		11.09	□□□□□ -0.63
HDLBP-238	ENST00000479894	PSG8	Q9UQ74	426 aa		11.09	□□□□□ -0.63
HDLBP-238	ENST00000479894	KLF12	Q9Y4X4	402 aa		11.09	□□□□□ -0.63
HDLBP-238	ENST00000479894	LOC102723971	A0A1B0GUV8	181 aa		11.08	□□□□□ -0.64
HDLBP-238	ENST00000479894	ATP5G3	P48201	142 aa		11.08	□□□□□ -0.64
HDLBP-238	ENST00000479894	SPINK13	Q1W4C9	94 aa		11.08	□□□□□ -0.64
HDLBP-238	ENST00000479894	C12orf74	Q32Q52	190 aa		11.08	□□□□□ -0.64
HDLBP-238	ENST00000479894	RNF212	Q495C1	297 aa		11.08	□□□□□ -0.64
HDLBP-238	ENST00000479894	FAM210B	Q96KR6	192 aa		11.08	□□□□□ -0.64
HDLBP-238	ENST00000479894	TREM1	Q9NP99	234 aa		11.08	□□□□□ -0.64
HDLBP-238	ENST00000479894		X6R8D5	127 aa		11.08	□□□□□ -0.64
HDLBP-238	ENST00000479894	TMEM250	H0YL14	139 aa		11.07	□□□□□ -0.64
HDLBP-238	ENST00000479894		M0R2Z0	102 aa		11.07	□□□□□ -0.64
HDLBP-238	ENST00000479894	TAS2R60	P59551	318 aa		11.07	□□□□□ -0.64
HDLBP-238	ENST00000479894	TNP2	Q05952	138 aa		11.07	□□□□□ -0.64
HDLBP-238	ENST00000479894	PEA15	Q15121	130 aa		11.07	□□□□□ -0.64
HDLBP-238	ENST00000479894	TMEM183B	Q1AE95	376 aa		11.07	□□□□□ -0.64
HDLBP-238	ENST00000479894	ZNF506	Q5JVG8	444 aa		11.07	□□□□□ -0.64
HDLBP-238	ENST00000479894	C11orf52	Q96A22	123 aa		11.07	□□□□□ -0.64
HDLBP-238	ENST00000479894	FAM19A4	Q96LR4	140 aa		11.07	□□□□□ -0.64
HDLBP-238	ENST00000479894	FAM210A	Q96ND0	272 aa		11.07	□□□□□ -0.64
HDLBP-238	ENST00000479894	C7orf71	A4D174	169 aa		11.06	□□□□□ -0.64
HDLBP-238	ENST00000479894	KLLN	B2CW77	178 aa		11.06	□□□□□ -0.64
HDLBP-238	ENST00000479894		H7BYZ3	331 aa		11.06	□□□□□ -0.64
HDLBP-238	ENST00000479894	GIG44	P09565	113 aa	Predicted RBP	11.06	□□□□□ -0.64
HDLBP-238	ENST00000479894	SMUG1	Q53HV7	270 aa		11.06	□□□□□ -0.64
HDLBP-238	ENST00000479894	CLLU1	Q5K131	121 aa		11.06	□□□□□ -0.64

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