RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 IGKV3-11P04433 115 aa3.08□□□□□ -1.92
CMSS1-204ENST00000479555 RPL7P18124 248 aaKnown RBP3.08□□□□□ -1.92
CMSS1-204ENST00000479555 UBE2D1P51668 147 aa3.08□□□□□ -1.92
CMSS1-204ENST00000479555 DSCR4P56555 118 aaPredicted RBP3.08□□□□□ -1.92
CMSS1-204ENST00000479555 SEC61GP60059 68 aa3.08□□□□□ -1.92
CMSS1-204ENST00000479555 ERHP84090 104 aaKnown RBP3.08□□□□□ -1.92
CMSS1-204ENST00000479555 KRTAP13-3Q3SY46 172 aa3.08□□□□□ -1.92
CMSS1-204ENST00000479555 POM121L1PQ3SYA9 428 aa3.08□□□□□ -1.92
CMSS1-204ENST00000479555 C2orf83Q53S99 150 aa3.08□□□□□ -1.92
CMSS1-204ENST00000479555 C10orf113Q5VZT2 155 aa3.08□□□□□ -1.92
CMSS1-204ENST00000479555 SCGB1D4Q6XE38 83 aa3.08□□□□□ -1.92
CMSS1-204ENST00000479555 LINC00643Q86TS7 51 aa3.08□□□□□ -1.92
CMSS1-204ENST00000479555 PCP2Q8IVA1 136 aa3.08□□□□□ -1.92
CMSS1-204ENST00000479555 BAALCQ8WXS3 180 aa3.08□□□□□ -1.92
CMSS1-204ENST00000479555 PLEKHB2Q96CS7 222 aa3.08□□□□□ -1.92
CMSS1-204ENST00000479555 PGLYRP4Q96LB8 373 aa3.08□□□□□ -1.92
CMSS1-204ENST00000479555 LINC01587Q99440 93 aa3.08□□□□□ -1.92
CMSS1-204ENST00000479555 S1PR3Q99500 378 aa3.08□□□□□ -1.92
CMSS1-204ENST00000479555 C21orf62Q9NYP8 219 aa3.08□□□□□ -1.92
CMSS1-204ENST00000479555 KLF13Q9Y2Y9 288 aaPredicted RBP3.08□□□□□ -1.92
CMSS1-204ENST00000479555 CDH23Q9H251 3354 aa3.08□□□□□ -1.92
CMSS1-204ENST00000479555 SZT2Q5T011 3432 aa3.07□□□□□ -1.92
CMSS1-204ENST00000479555 THADAQ6YHU6 1953 aa3.07□□□□□ -1.92
CMSS1-204ENST00000479555 IGKV1-27A0A075B6S5 117 aa3.07□□□□□ -1.92
CMSS1-204ENST00000479555 IGKV1D-43A0A0B4J1Z2 117 aa3.07□□□□□ -1.92
CMSS1-204ENST00000479555 TRAV4A0A0B4J268 109 aa3.07□□□□□ -1.92
CMSS1-204ENST00000479555 A0A0B4J2C4 111 aa3.07□□□□□ -1.92
CMSS1-204ENST00000479555 IGKV1-6A0A0C4DH72 117 aa3.07□□□□□ -1.92
CMSS1-204ENST00000479555 IGKV1-12A0A0C4DH73 117 aa3.07□□□□□ -1.92
CMSS1-204ENST00000479555 A0A1W2PNU3 283 aaPredicted RBP3.07□□□□□ -1.92
CMSS1-204ENST00000479555 F8VRH5 84 aa3.07□□□□□ -1.92
CMSS1-204ENST00000479555 J3QT63 122 aa3.07□□□□□ -1.92
CMSS1-204ENST00000479555 IGKV1D-12P01611 117 aa3.07□□□□□ -1.92
CMSS1-204ENST00000479555 STATHP02808 62 aa3.07□□□□□ -1.92
CMSS1-204ENST00000479555 IGLC6P0CF74 106 aa3.07□□□□□ -1.92
CMSS1-204ENST00000479555 CYBAP13498 195 aa3.07□□□□□ -1.92
CMSS1-204ENST00000479555 CKS2P33552 79 aa3.07□□□□□ -1.92
CMSS1-204ENST00000479555 INSL3P51460 131 aa3.07□□□□□ -1.92
CMSS1-204ENST00000479555 ATP5EP56381 51 aaPredicted RBP3.07□□□□□ -1.92
CMSS1-204ENST00000479555 PPP1CAP62136 330 aa3.07□□□□□ -1.92
CMSS1-204ENST00000479555 GNG5P63218 68 aa3.07□□□□□ -1.92
CMSS1-204ENST00000479555 ZNF816Q0VGE8 651 aaPredicted RBP3.07□□□□□ -1.92
CMSS1-204ENST00000479555 C1orf61Q13536 156 aa3.07□□□□□ -1.92
CMSS1-204ENST00000479555 NNATQ16517 81 aa3.07□□□□□ -1.92
CMSS1-204ENST00000479555 ORMDL2Q53FV1 153 aa3.07□□□□□ -1.92
CMSS1-204ENST00000479555 DEFB121Q5J5C9 76 aa3.07□□□□□ -1.92
CMSS1-204ENST00000479555 ATP1A1-AS1Q5TC04 95 aa3.07□□□□□ -1.92
CMSS1-204ENST00000479555 GDF5OSQ5U4N7 250 aa3.07□□□□□ -1.92
CMSS1-204ENST00000479555 FAM104BQ5XKR9 115 aa3.07□□□□□ -1.92
CMSS1-204ENST00000479555 GOLT1AQ6ZVE7 132 aa3.07□□□□□ -1.92
CMSS1-204ENST00000479555 MIR17HGQ75NE6 70 aa3.07□□□□□ -1.92
CMSS1-204ENST00000479555 COX8CQ7Z4L0 72 aa3.07□□□□□ -1.92
CMSS1-204ENST00000479555 ABHD12Q8N2K0 398 aa3.07□□□□□ -1.92
CMSS1-204ENST00000479555 C8orf31Q8N9H6 132 aa3.07□□□□□ -1.92
CMSS1-204ENST00000479555 TMEM75Q8N9X5 138 aa3.07□□□□□ -1.92
CMSS1-204ENST00000479555 FLVCR1-AS1Q8TAF5 88 aa3.07□□□□□ -1.92
CMSS1-204ENST00000479555 OPRPNQ99935 248 aaPredicted RBP3.07□□□□□ -1.92
CMSS1-204ENST00000479555 FAM173AQ9BQD7 235 aa3.07□□□□□ -1.92
CMSS1-204ENST00000479555 OTORQ9NRC9 128 aa3.07□□□□□ -1.92
CMSS1-204ENST00000479555 DEC1Q9P2X7 70 aa3.07□□□□□ -1.92
CMSS1-204ENST00000479555 PRO1854Q9UHT4 67 aa3.07□□□□□ -1.92
CMSS1-204ENST00000479555 HHLA3Q9XRX5 114 aa3.07□□□□□ -1.92
CMSS1-204ENST00000479555 PYGO1Q9Y3Y4 419 aa3.07□□□□□ -1.92
CMSS1-204ENST00000479555 TIMM8BQ9Y5J9 83 aaPredicted RBP3.07□□□□□ -1.92
CMSS1-204ENST00000479555 KIAA0100Q14667 2235 aaKnown RBP3.07□□□□□ -1.92
CMSS1-204ENST00000479555 IGLV7-46A0A075B6I9 117 aa3.06□□□□□ -1.92
CMSS1-204ENST00000479555 TRAV13-1A0A0B4J241 112 aa3.06□□□□□ -1.92
CMSS1-204ENST00000479555 PGPA6NDG6 321 aa3.06□□□□□ -1.92
CMSS1-204ENST00000479555 K7ERJ3 54 aa3.06□□□□□ -1.92
CMSS1-204ENST00000479555 CXCL10P02778 98 aa3.06□□□□□ -1.92
CMSS1-204ENST00000479555 CLPSP04118 112 aa3.06□□□□□ -1.92
CMSS1-204ENST00000479555 TCRAP04437 139 aa3.06□□□□□ -1.92
CMSS1-204ENST00000479555 INAFM2P0DMQ5 153 aa3.06□□□□□ -1.92
CMSS1-204ENST00000479555 PSMB8P28062 276 aa3.06□□□□□ -1.92
CMSS1-204ENST00000479555 IFI27P40305 119 aaPredicted RBP3.06□□□□□ -1.92
CMSS1-204ENST00000479555 CCL8P80075 99 aa3.06□□□□□ -1.92
CMSS1-204ENST00000479555 EIF4EBP1Q13541 118 aaPredicted RBP3.06□□□□□ -1.92
CMSS1-204ENST00000479555 ZNF77Q15935 545 aa3.06□□□□□ -1.92
CMSS1-204ENST00000479555 C6orf226Q5I0X4 101 aa3.06□□□□□ -1.92
CMSS1-204ENST00000479555 S100A7L2Q5SY68 101 aa3.06□□□□□ -1.92
CMSS1-204ENST00000479555 DUX4L9Q6RFH8 374 aaPredicted RBP3.06□□□□□ -1.92
CMSS1-204ENST00000479555 LINC00173Q6ZV60 143 aa3.06□□□□□ -1.92
CMSS1-204ENST00000479555 NDUFA11Q86Y39 141 aa3.06□□□□□ -1.92
CMSS1-204ENST00000479555 PRUNE2Q8WUY3 3088 aa3.06□□□□□ -1.92
CMSS1-204ENST00000479555 NABP1Q96AH0 204 aa3.06□□□□□ -1.92
CMSS1-204ENST00000479555 FLYWCH2Q96CP2 140 aaKnown RBP3.06□□□□□ -1.92
CMSS1-204ENST00000479555 CARD19Q96LW7 228 aa3.06□□□□□ -1.92
CMSS1-204ENST00000479555 EMC6Q9BV81 110 aa3.06□□□□□ -1.92
CMSS1-204ENST00000479555 DEPPQ9NTK1 212 aa3.06□□□□□ -1.92
CMSS1-204ENST00000479555 TMEM14BQ9NUH8 114 aa3.06□□□□□ -1.92
CMSS1-204ENST00000479555 TMEM14CQ9P0S9 112 aa3.06□□□□□ -1.92
CMSS1-204ENST00000479555 CHD7Q9P2D1 2997 aa3.05□□□□□ -1.92
CMSS1-204ENST00000479555 A0A087WZ39 114 aa3.05□□□□□ -1.92
CMSS1-204ENST00000479555 IGKV3D-11A0A0A0MRZ8 115 aa3.05□□□□□ -1.92
CMSS1-204ENST00000479555 TRAV17A0A0B4J275 112 aa3.05□□□□□ -1.92
CMSS1-204ENST00000479555 TRBV30A0A0K0K1B3 111 aa3.05□□□□□ -1.92
CMSS1-204ENST00000479555 FAM236AA0A1B0GUQ0 79 aa3.05□□□□□ -1.92
CMSS1-204ENST00000479555 FAM236BA0A1B0GV22 79 aa3.05□□□□□ -1.92
CMSS1-204ENST00000479555 TINCRA0A1B0GVN0 87 aa3.05□□□□□ -1.92
CMSS1-204ENST00000479555 D6R8Y8 96 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms