RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 IGHV3OR16-12A0A075B7B8 117 aa5.99□□□□□ -1.45
HDAC6-221ENST00000477561 TRAV8-2A0A0B4J237 113 aa5.99□□□□□ -1.45
HDAC6-221ENST00000477561 SERTM2A0A1B0GWG4 89 aa5.99□□□□□ -1.45
HDAC6-221ENST00000477561 NUPR2A6NF83 97 aa5.99□□□□□ -1.45
HDAC6-221ENST00000477561 H3BTX0 84 aa5.99□□□□□ -1.45
HDAC6-221ENST00000477561 K7EQM0 130 aa5.99□□□□□ -1.45
HDAC6-221ENST00000477561 PEX7O00628 323 aa5.99□□□□□ -1.45
HDAC6-221ENST00000477561 ZNF705DP0CH99 300 aaPredicted RBP5.99□□□□□ -1.45
HDAC6-221ENST00000477561 ZNF705BP0CI00 300 aaPredicted RBP5.99□□□□□ -1.45
HDAC6-221ENST00000477561 HLA-DMBP28068 263 aa5.99□□□□□ -1.45
HDAC6-221ENST00000477561 TAS2R60P59551 318 aa5.99□□□□□ -1.45
HDAC6-221ENST00000477561 UBE2G1P62253 170 aa5.99□□□□□ -1.45
HDAC6-221ENST00000477561 EBLN2Q6P2I7 272 aa5.99□□□□□ -1.45
HDAC6-221ENST00000477561 CLRN3Q8NCR9 226 aa5.99□□□□□ -1.45
HDAC6-221ENST00000477561 ATG101Q9BSB4 218 aa5.99□□□□□ -1.45
HDAC6-221ENST00000477561 C1QTNF4Q9BXJ3 329 aa5.99□□□□□ -1.45
HDAC6-221ENST00000477561 C11orf68Q9H3H3 251 aaKnown RBP5.99□□□□□ -1.45
HDAC6-221ENST00000477561 PRELID1Q9Y255 219 aa5.99□□□□□ -1.45
HDAC6-221ENST00000477561 A0A0J9YX75 114 aa5.98□□□□□ -1.45
HDAC6-221ENST00000477561 FBLL1A6NHQ2 334 aaKnown RBP5.98□□□□□ -1.45
HDAC6-221ENST00000477561 B4DEV8 164 aa5.98□□□□□ -1.45
HDAC6-221ENST00000477561 C9JCJ5 164 aa5.98□□□□□ -1.45
HDAC6-221ENST00000477561 TCRAP04437 139 aa5.98□□□□□ -1.45
HDAC6-221ENST00000477561 MIFP14174 115 aa5.98□□□□□ -1.45
HDAC6-221ENST00000477561 RPL35P42766 123 aaKnown RBP5.98□□□□□ -1.45
HDAC6-221ENST00000477561 RHEBQ15382 184 aa5.98□□□□□ -1.45
HDAC6-221ENST00000477561 EXOC3-AS1Q8N2X6 119 aa5.98□□□□□ -1.45
HDAC6-221ENST00000477561 C2CD4CQ8TF44 421 aa5.98□□□□□ -1.45
HDAC6-221ENST00000477561 MRPL53Q96EL3 112 aaKnown RBP5.98□□□□□ -1.45
HDAC6-221ENST00000477561 FMC1Q96HJ9 113 aa5.98□□□□□ -1.45
HDAC6-221ENST00000477561 SDF2L1Q9HCN8 221 aa5.98□□□□□ -1.45
HDAC6-221ENST00000477561 ZNF331Q9NQX6 463 aaPredicted RBP5.98□□□□□ -1.45
HDAC6-221ENST00000477561 KLK5Q9Y337 293 aaPredicted RBP5.98□□□□□ -1.45
HDAC6-221ENST00000477561 LY96Q9Y6Y9 160 aa5.98□□□□□ -1.45
HDAC6-221ENST00000477561 SLC17A3O00476 420 aa5.97□□□□□ -1.45
HDAC6-221ENST00000477561 LY6G6CO95867 125 aa5.97□□□□□ -1.45
HDAC6-221ENST00000477561 GNG4P50150 75 aa5.97□□□□□ -1.45
HDAC6-221ENST00000477561 EMP1P54849 157 aa5.97□□□□□ -1.45
HDAC6-221ENST00000477561 GNG5P63218 68 aa5.97□□□□□ -1.45
HDAC6-221ENST00000477561 ADIRFQ15847 76 aa5.97□□□□□ -1.45
HDAC6-221ENST00000477561 TMEM183BQ1AE95 376 aa5.97□□□□□ -1.45
HDAC6-221ENST00000477561 ZNF738Q8NE65 137 aa5.97□□□□□ -1.45
HDAC6-221ENST00000477561 SMIM12Q96EX1 92 aa5.97□□□□□ -1.45
HDAC6-221ENST00000477561 RPS10P5Q9NQ39 176 aa5.97□□□□□ -1.45
HDAC6-221ENST00000477561 RPH3ALQ9UNE2 315 aa5.97□□□□□ -1.45
HDAC6-221ENST00000477561 CELA1Q9UNI1 258 aa5.97□□□□□ -1.45
HDAC6-221ENST00000477561 TRBV6-1A0A0K0K1D8 114 aa5.96□□□□□ -1.46
HDAC6-221ENST00000477561 C7orf77A4D0Y5 90 aa5.96□□□□□ -1.46
HDAC6-221ENST00000477561 DIRC3C9JPN6 131 aa5.96□□□□□ -1.46
HDAC6-221ENST00000477561 RPL23P62829 140 aaKnown RBP5.96□□□□□ -1.46
HDAC6-221ENST00000477561 CENPWQ5EE01 88 aa5.96□□□□□ -1.46
HDAC6-221ENST00000477561 LINC01551Q86U37 167 aa5.96□□□□□ -1.46
HDAC6-221ENST00000477561 C1orf158Q8N1D5 194 aa5.96□□□□□ -1.46
HDAC6-221ENST00000477561 TMEM75Q8N9X5 138 aa5.96□□□□□ -1.46
HDAC6-221ENST00000477561 LINC00476Q8WZB0 136 aa5.96□□□□□ -1.46
HDAC6-221ENST00000477561 DERL1Q9BUN8 251 aa5.96□□□□□ -1.46
HDAC6-221ENST00000477561 CTDSP1Q9GZU7 261 aa5.96□□□□□ -1.46
HDAC6-221ENST00000477561 BIN3Q9NQY0 253 aa5.96□□□□□ -1.46
HDAC6-221ENST00000477561 KLF12Q9Y4X4 402 aa5.96□□□□□ -1.46
HDAC6-221ENST00000477561 A0A087WWC5 75 aa5.95□□□□□ -1.46
HDAC6-221ENST00000477561 RBAKDNA6NC62 111 aa5.95□□□□□ -1.46
HDAC6-221ENST00000477561 ZNF705FA8MVS1 300 aaPredicted RBP5.95□□□□□ -1.46
HDAC6-221ENST00000477561 IGLL5B9A064 214 aa5.95□□□□□ -1.46
HDAC6-221ENST00000477561 M0R2Z0 102 aa5.95□□□□□ -1.46
HDAC6-221ENST00000477561 PPP1R2P9O14990 202 aa5.95□□□□□ -1.46
HDAC6-221ENST00000477561 DUSP14O95147 198 aaKnown RBP5.95□□□□□ -1.46
HDAC6-221ENST00000477561 MT-ND4LP03901 98 aa5.95□□□□□ -1.46
HDAC6-221ENST00000477561 PRM2P04554 102 aa5.95□□□□□ -1.46
HDAC6-221ENST00000477561 HIST1H1AQ02539 215 aaPredicted RBP5.95□□□□□ -1.46
HDAC6-221ENST00000477561 PSG3Q16557 428 aa5.95□□□□□ -1.46
HDAC6-221ENST00000477561 SPINK13Q1W4C9 94 aa5.95□□□□□ -1.46
HDAC6-221ENST00000477561 ATRAIDQ6UW56 229 aa5.95□□□□□ -1.46
HDAC6-221ENST00000477561 AMTNQ6UX39 209 aa5.95□□□□□ -1.46
HDAC6-221ENST00000477561 ZNF705AQ6ZN79 300 aaPredicted RBP5.95□□□□□ -1.46
HDAC6-221ENST00000477561 Q6ZTC4 211 aa5.95□□□□□ -1.46
HDAC6-221ENST00000477561 GOLT1AQ6ZVE7 132 aa5.95□□□□□ -1.46
HDAC6-221ENST00000477561 BAGE2Q86Y30 109 aa5.95□□□□□ -1.46
HDAC6-221ENST00000477561 ANAPC16Q96DE5 110 aa5.95□□□□□ -1.46
HDAC6-221ENST00000477561 IGF2BP2-AS1Q96M15 143 aa5.95□□□□□ -1.46
HDAC6-221ENST00000477561 CLUHP3Q96NS8 147 aa5.95□□□□□ -1.46
HDAC6-221ENST00000477561 SMCO4Q9NRQ5 59 aa5.95□□□□□ -1.46
HDAC6-221ENST00000477561 VPS13DQ5THJ4 4388 aa5.95□□□□□ -1.46
HDAC6-221ENST00000477561 TRAV12-2A0A075B6T6 113 aa5.94□□□□□ -1.46
HDAC6-221ENST00000477561 TRAV34A0A0B4J273 112 aa5.94□□□□□ -1.46
HDAC6-221ENST00000477561 PRAC2D3DTV9 90 aa5.94□□□□□ -1.46
HDAC6-221ENST00000477561 M0R3E3 92 aa5.94□□□□□ -1.46
HDAC6-221ENST00000477561 LTAP01374 205 aa5.94□□□□□ -1.46
HDAC6-221ENST00000477561 FLI1Q01543 452 aaPredicted RBP5.94□□□□□ -1.46
HDAC6-221ENST00000477561 C12orf74Q32Q52 190 aa5.94□□□□□ -1.46
HDAC6-221ENST00000477561 Q86TA4 180 aa5.94□□□□□ -1.46
HDAC6-221ENST00000477561 C15orf54Q8N8G6 183 aa5.94□□□□□ -1.46
HDAC6-221ENST00000477561 OR8A1Q8NGG7 326 aa5.94□□□□□ -1.46
HDAC6-221ENST00000477561 OCC1Q8TAD7 63 aa5.94□□□□□ -1.46
HDAC6-221ENST00000477561 ISOC2Q96AB3 205 aa5.94□□□□□ -1.46
HDAC6-221ENST00000477561 LINC00479Q96M42 142 aa5.94□□□□□ -1.46
HDAC6-221ENST00000477561 NDFIP1Q9BT67 221 aa5.94□□□□□ -1.46
HDAC6-221ENST00000477561 TMEM208Q9BTX3 173 aa5.94□□□□□ -1.46
HDAC6-221ENST00000477561 TMEM242Q9NWH2 141 aa5.94□□□□□ -1.46
HDAC6-221ENST00000477561 PPP1R14DQ9NXH3 145 aa5.94□□□□□ -1.46
HDAC6-221ENST00000477561 PSG8Q9UQ74 426 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms