RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 TSSC4Q9Y5U2 329 aaPredicted RBP9.3□□□□□ -0.92
U2AF1-209ENST00000475639 LHBP01229 141 aa9.29□□□□□ -0.92
U2AF1-209ENST00000475639 CELA3AP09093 270 aa9.29□□□□□ -0.92
U2AF1-209ENST00000475639 P0C879 139 aa9.29□□□□□ -0.92
U2AF1-209ENST00000475639 TRPT1Q86TN4 253 aaKnown RBP9.29□□□□□ -0.92
U2AF1-209ENST00000475639 FER1L5A0AVI2 2057 aa9.29□□□□□ -0.92
U2AF1-209ENST00000475639 F8P00451 2351 aa9.29□□□□□ -0.92
U2AF1-209ENST00000475639 CHD9Q3L8U1 2897 aa9.29□□□□□ -0.92
U2AF1-209ENST00000475639 PTPRSQ13332 1948 aa9.29□□□□□ -0.92
U2AF1-209ENST00000475639 GDF5OSQ5U4N7 250 aa9.29□□□□□ -0.92
U2AF1-209ENST00000475639 IL17RELQ6ZVW7 336 aa9.29□□□□□ -0.92
U2AF1-209ENST00000475639 AMN1Q8IY45 258 aa9.29□□□□□ -0.92
U2AF1-209ENST00000475639 ASPHD1Q5U4P2 390 aa9.29□□□□□ -0.92
U2AF1-209ENST00000475639 ATP6V0BQ99437 205 aa9.29□□□□□ -0.92
U2AF1-209ENST00000475639 SH2D1AO60880 128 aa9.29□□□□□ -0.92
U2AF1-209ENST00000475639 ARMS2P0C7Q2 107 aa9.29□□□□□ -0.92
U2AF1-209ENST00000475639 DSCR9P59020 149 aa9.29□□□□□ -0.92
U2AF1-209ENST00000475639 TCF15Q12870 199 aa9.29□□□□□ -0.92
U2AF1-209ENST00000475639 C2orf91Q6ZV80 131 aa9.29□□□□□ -0.92
U2AF1-209ENST00000475639 PIP4P2Q8N4L2 257 aa9.29□□□□□ -0.92
U2AF1-209ENST00000475639 Q8TAT8 98 aa9.29□□□□□ -0.92
U2AF1-209ENST00000475639 USMG5Q96IX5 58 aa9.29□□□□□ -0.92
U2AF1-209ENST00000475639 C15orf62A8K5M9 175 aa9.28□□□□□ -0.92
U2AF1-209ENST00000475639 K7EP34 96 aa9.28□□□□□ -0.92
U2AF1-209ENST00000475639 NDUFS5O43920 106 aa9.28□□□□□ -0.92
U2AF1-209ENST00000475639 IGHG4P01861 327 aa9.28□□□□□ -0.92
U2AF1-209ENST00000475639 PRB3Q04118 309 aaPredicted RBP9.28□□□□□ -0.92
U2AF1-209ENST00000475639 MINOS1Q5TGZ0 78 aa9.28□□□□□ -0.92
U2AF1-209ENST00000475639 MINOS1-NBL1R4GNA1 71 aa9.28□□□□□ -0.92
U2AF1-209ENST00000475639 FGF6P10767 208 aa9.28□□□□□ -0.92
U2AF1-209ENST00000475639 SYNJ2BPP57105 145 aa9.28□□□□□ -0.92
U2AF1-209ENST00000475639 FOXF2Q12947 444 aa9.28□□□□□ -0.92
U2AF1-209ENST00000475639 SPATA31B1PQ5VZV4 182 aa9.28□□□□□ -0.92
U2AF1-209ENST00000475639 NDUFC2O95298 119 aa9.28□□□□□ -0.92
U2AF1-209ENST00000475639 CRYBA4P53673 196 aa9.28□□□□□ -0.92
U2AF1-209ENST00000475639 C2CD3Q4AC94 2353 aa9.28□□□□□ -0.92
U2AF1-209ENST00000475639 A0A087WWL8 130 aa9.28□□□□□ -0.92
U2AF1-209ENST00000475639 NXPH4O95158 308 aa9.28□□□□□ -0.92
U2AF1-209ENST00000475639 C2orf66Q6UXQ4 117 aa9.28□□□□□ -0.92
U2AF1-209ENST00000475639 ZCCHC24Q8N2G6 241 aaKnown RBP9.28□□□□□ -0.92
U2AF1-209ENST00000475639 ANKRD29Q8N6D5 301 aa9.28□□□□□ -0.92
U2AF1-209ENST00000475639 MCRIP2Q9BUT9 160 aaKnown RBP9.28□□□□□ -0.92
U2AF1-209ENST00000475639 TRBV7-1A0A0A6YYK4 115 aa9.27□□□□□ -0.93
U2AF1-209ENST00000475639 F8W1H4 67 aa9.27□□□□□ -0.93
U2AF1-209ENST00000475639 LTBP2Q14767 1821 aa9.27□□□□□ -0.93
U2AF1-209ENST00000475639 C9orf118A6NHY6 69 aa9.27□□□□□ -0.93
U2AF1-209ENST00000475639 TRBV6-6A0A0A6YYG2 114 aa9.27□□□□□ -0.93
U2AF1-209ENST00000475639 A0A1W2PPI3 338 aa9.27□□□□□ -0.93
U2AF1-209ENST00000475639 LYNX1G3V0Z9 82 aa9.27□□□□□ -0.93
U2AF1-209ENST00000475639 LYNX1P0DP58 116 aa9.27□□□□□ -0.93
U2AF1-209ENST00000475639 PRR31Q5SQ13 230 aa9.27□□□□□ -0.93
U2AF1-209ENST00000475639 RHPN1-AS1Q9BWJ2 59 aa9.27□□□□□ -0.93
U2AF1-209ENST00000475639 TRBV25-1A0A075B6N4 114 aa9.26□□□□□ -0.93
U2AF1-209ENST00000475639 CHKB-CPT1BH3BT56 60 aa9.26□□□□□ -0.93
U2AF1-209ENST00000475639 CGB3P0DN86 165 aa9.26□□□□□ -0.93
U2AF1-209ENST00000475639 FOXG1P55316 489 aaPredicted RBP9.26□□□□□ -0.93
U2AF1-209ENST00000475639 C9orf106Q8NAJ2 232 aa9.26□□□□□ -0.93
U2AF1-209ENST00000475639 IGLV2-8P01709 118 aa9.26□□□□□ -0.93
U2AF1-209ENST00000475639 SLC25A16P16260 332 aa9.26□□□□□ -0.93
U2AF1-209ENST00000475639 C5orf64Q2M2E5 130 aa9.26□□□□□ -0.93
U2AF1-209ENST00000475639 SRRM5B3KS81 715 aa9.26□□□□□ -0.93
U2AF1-209ENST00000475639 H3BUX3 64 aa9.26□□□□□ -0.93
U2AF1-209ENST00000475639 KRTAP27-1Q3LI81 207 aa9.26□□□□□ -0.93
U2AF1-209ENST00000475639 RMI2Q96E14 147 aa9.26□□□□□ -0.93
U2AF1-209ENST00000475639 PRO1854Q9UHT4 67 aa9.26□□□□□ -0.93
U2AF1-209ENST00000475639 ZGRF1Q86YA3 2104 aa9.26□□□□□ -0.93
U2AF1-209ENST00000475639 TRAV26-1A0A087WT03 109 aa9.26□□□□□ -0.93
U2AF1-209ENST00000475639 B4DSR2 109 aa9.26□□□□□ -0.93
U2AF1-209ENST00000475639 KLRD1Q13241 179 aa9.26□□□□□ -0.93
U2AF1-209ENST00000475639 LCNL1Q6ZST4 164 aa9.26□□□□□ -0.93
U2AF1-209ENST00000475639 WIPF2Q8TF74 440 aaPredicted RBP9.26□□□□□ -0.93
U2AF1-209ENST00000475639 RNF138Q8WVD3 245 aa9.26□□□□□ -0.93
U2AF1-209ENST00000475639 NDUFA12Q9UI09 145 aa9.26□□□□□ -0.93
U2AF1-209ENST00000475639 DYSFO75923 2080 aa9.26□□□□□ -0.93
U2AF1-209ENST00000475639 F5H768 121 aa9.25□□□□□ -0.93
U2AF1-209ENST00000475639 FAM104BQ5XKR9 115 aa9.25□□□□□ -0.93
U2AF1-209ENST00000475639 IGHV1-24A0A0C4DH33 117 aa9.25□□□□□ -0.93
U2AF1-209ENST00000475639 BRWD1-AS2P59051 145 aa9.25□□□□□ -0.93
U2AF1-209ENST00000475639 FGFBP3Q8TAT2 258 aa9.25□□□□□ -0.93
U2AF1-209ENST00000475639 TMEM141Q96I45 108 aa9.25□□□□□ -0.93
U2AF1-209ENST00000475639 BDP1A6H8Y1 2624 aa9.25□□□□□ -0.93
U2AF1-209ENST00000475639 TRAV13-2A0A0B4J235 113 aa9.25□□□□□ -0.93
U2AF1-209ENST00000475639 TEX48A0A1B0GUV7 120 aa9.25□□□□□ -0.93
U2AF1-209ENST00000475639 SMKR1H3BMG3 65 aa9.25□□□□□ -0.93
U2AF1-209ENST00000475639 TP53TG1Q9Y2A0 90 aa9.25□□□□□ -0.93
U2AF1-209ENST00000475639 CSPG4Q6UVK1 2322 aa9.25□□□□□ -0.93
U2AF1-209ENST00000475639 A0A1W2PR77 199 aa9.25□□□□□ -0.93
U2AF1-209ENST00000475639 ZNF672Q499Z4 452 aaPredicted RBP9.25□□□□□ -0.93
U2AF1-209ENST00000475639 EML6Q6ZMW3 1958 aa9.24□□□□□ -0.93
U2AF1-209ENST00000475639 ZNF883P0CG24 379 aa9.24□□□□□ -0.93
U2AF1-209ENST00000475639 NTF4P34130 210 aa9.24□□□□□ -0.93
U2AF1-209ENST00000475639 NDPQ00604 133 aa9.24□□□□□ -0.93
U2AF1-209ENST00000475639 PDE6HQ13956 83 aa9.24□□□□□ -0.93
U2AF1-209ENST00000475639 TMEM219Q86XT9 240 aa9.24□□□□□ -0.93
U2AF1-209ENST00000475639 DEFB131AP59861 70 aa9.24□□□□□ -0.93
U2AF1-209ENST00000475639 VMO1Q7Z5L0 202 aa9.24□□□□□ -0.93
U2AF1-209ENST00000475639 PSPNO60542 156 aa9.24□□□□□ -0.93
U2AF1-209ENST00000475639 DAD1P61803 113 aa9.24□□□□□ -0.93
U2AF1-209ENST00000475639 KLHL30-AS1Q8NEE0 82 aa9.24□□□□□ -0.93
U2AF1-209ENST00000475639 FRYQ5TBA9 3013 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms