RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 SPATA45Q537H7 98 aa4.54□□□□□ -1.68
ATPAF1-204ENST00000474020 LCN12Q6JVE5 192 aa4.54□□□□□ -1.68
ATPAF1-204ENST00000474020 C16orf54Q6UWD8 224 aa4.54□□□□□ -1.68
ATPAF1-204ENST00000474020 C9orf139Q6ZV77 190 aa4.54□□□□□ -1.68
ATPAF1-204ENST00000474020 COX8CQ7Z4L0 72 aa4.54□□□□□ -1.68
ATPAF1-204ENST00000474020 NIT1Q86X76 327 aa4.54□□□□□ -1.68
ATPAF1-204ENST00000474020 PRSS3P2Q8NHM4 247 aa4.54□□□□□ -1.68
ATPAF1-204ENST00000474020 C17orf77Q96MU5 243 aa4.54□□□□□ -1.68
ATPAF1-204ENST00000474020 RCHY1Q96PM5 261 aa4.54□□□□□ -1.68
ATPAF1-204ENST00000474020 PRR25Q96S07 402 aa4.54□□□□□ -1.68
ATPAF1-204ENST00000474020 RELNP78509 3460 aa4.54□□□□□ -1.68
ATPAF1-204ENST00000474020 NAV3Q8IVL0 2385 aa4.54□□□□□ -1.68
ATPAF1-204ENST00000474020 FBN2P35556 2912 aa4.53□□□□□ -1.68
ATPAF1-204ENST00000474020 TRAV9-2A0A087WT02 112 aa4.53□□□□□ -1.68
ATPAF1-204ENST00000474020 IGKV2-40A0A087WW87 121 aaPredicted RBP4.53□□□□□ -1.68
ATPAF1-204ENST00000474020 J3QLI3 93 aa4.53□□□□□ -1.68
ATPAF1-204ENST00000474020 NDUFA4O00483 81 aa4.53□□□□□ -1.68
ATPAF1-204ENST00000474020 OVOL1O14753 267 aa4.53□□□□□ -1.68
ATPAF1-204ENST00000474020 BRI3O95415 125 aa4.53□□□□□ -1.68
ATPAF1-204ENST00000474020 IGKV2D-40P01614 121 aaPredicted RBP4.53□□□□□ -1.68
ATPAF1-204ENST00000474020 ORM1P02763 201 aa4.53□□□□□ -1.68
ATPAF1-204ENST00000474020 PPBPP02775 128 aa4.53□□□□□ -1.68
ATPAF1-204ENST00000474020 FRMD6-AS1P0C7T7 363 aa4.53□□□□□ -1.68
ATPAF1-204ENST00000474020 C3orf79P0CE67 100 aa4.53□□□□□ -1.68
ATPAF1-204ENST00000474020 TWIST1Q15672 202 aa4.53□□□□□ -1.68
ATPAF1-204ENST00000474020 PET117Q6UWS5 81 aa4.53□□□□□ -1.68
ATPAF1-204ENST00000474020 LINC00322Q6ZN03 302 aaPredicted RBP4.53□□□□□ -1.68
ATPAF1-204ENST00000474020 Q6ZN92 141 aa4.53□□□□□ -1.68
ATPAF1-204ENST00000474020 ORMDL3Q8N138 153 aa4.53□□□□□ -1.68
ATPAF1-204ENST00000474020 FAM19A2Q8N3H0 131 aa4.53□□□□□ -1.68
ATPAF1-204ENST00000474020 GATD1Q8NB37 220 aa4.53□□□□□ -1.68
ATPAF1-204ENST00000474020 OR10AG1Q8NH19 301 aa4.53□□□□□ -1.68
ATPAF1-204ENST00000474020 LAMTOR2Q9Y2Q5 125 aa4.53□□□□□ -1.68
ATPAF1-204ENST00000474020 CELSR3Q9NYQ7 3312 aa4.53□□□□□ -1.68
ATPAF1-204ENST00000474020 FBN3Q75N90 2809 aa4.53□□□□□ -1.68
ATPAF1-204ENST00000474020 IGHV3OR16-10A0A075B7F0 116 aa4.52□□□□□ -1.69
ATPAF1-204ENST00000474020 TMSB15BA0A087X1C1 80 aa4.52□□□□□ -1.69
ATPAF1-204ENST00000474020 IGHV3-35A0A0C4DH35 117 aa4.52□□□□□ -1.69
ATPAF1-204ENST00000474020 IGHV4-61A0A0C4DH41 118 aa4.52□□□□□ -1.69
ATPAF1-204ENST00000474020 G3V318 75 aa4.52□□□□□ -1.69
ATPAF1-204ENST00000474020 H3BUX3 64 aa4.52□□□□□ -1.69
ATPAF1-204ENST00000474020 J3QKU1 62 aa4.52□□□□□ -1.69
ATPAF1-204ENST00000474020 BUB3O43684 328 aa4.52□□□□□ -1.69
ATPAF1-204ENST00000474020 IGF1P05019 195 aa4.52□□□□□ -1.69
ATPAF1-204ENST00000474020 ARMS2P0C7Q2 107 aa4.52□□□□□ -1.69
ATPAF1-204ENST00000474020 PF4V1P10720 104 aa4.52□□□□□ -1.69
ATPAF1-204ENST00000474020 CKS2P33552 79 aa4.52□□□□□ -1.69
ATPAF1-204ENST00000474020 CTRLP40313 264 aa4.52□□□□□ -1.69
ATPAF1-204ENST00000474020 ID1P41134 155 aa4.52□□□□□ -1.69
ATPAF1-204ENST00000474020 ZNF138P52744 262 aa4.52□□□□□ -1.69
ATPAF1-204ENST00000474020 PROK1P58294 105 aa4.52□□□□□ -1.69
ATPAF1-204ENST00000474020 CACNG7P62955 275 aa4.52□□□□□ -1.69
ATPAF1-204ENST00000474020 SRSF1Q07955 248 aaKnown RBP eCLIP4.52□□□□□ -1.69
ATPAF1-204ENST00000474020 PSMG4Q5JS54 123 aa4.52□□□□□ -1.69
ATPAF1-204ENST00000474020 GDF5OSQ5U4N7 250 aa4.52□□□□□ -1.69
ATPAF1-204ENST00000474020 LYZL1Q6UWQ5 148 aa4.52□□□□□ -1.69
ATPAF1-204ENST00000474020 ZNF493Q6ZR52 646 aa4.52□□□□□ -1.69
ATPAF1-204ENST00000474020 TMEM219Q86XT9 240 aa4.52□□□□□ -1.69
ATPAF1-204ENST00000474020 ZNF738Q8NE65 137 aa4.52□□□□□ -1.69
ATPAF1-204ENST00000474020 OR10J6PQ8NGY7 276 aa4.52□□□□□ -1.69
ATPAF1-204ENST00000474020 PRELID3AQ96N28 172 aa4.52□□□□□ -1.69
ATPAF1-204ENST00000474020 MAP1LC3AQ9H492 121 aa4.52□□□□□ -1.69
ATPAF1-204ENST00000474020 LENEPQ9Y5L5 61 aa4.52□□□□□ -1.69
ATPAF1-204ENST00000474020 NOTCH2Q04721 2471 aa4.51□□□□□ -1.69
ATPAF1-204ENST00000474020 IGHV1-24A0A0C4DH33 117 aa4.51□□□□□ -1.69
ATPAF1-204ENST00000474020 A6NDX4 124 aa4.51□□□□□ -1.69
ATPAF1-204ENST00000474020 VWC2LB2RUY7 222 aa4.51□□□□□ -1.69
ATPAF1-204ENST00000474020 SYS1-DBNDD2H3BUS1 97 aa4.51□□□□□ -1.69
ATPAF1-204ENST00000474020 TRIAP1O43715 76 aa4.51□□□□□ -1.69
ATPAF1-204ENST00000474020 IGHG2P01859 326 aa4.51□□□□□ -1.69
ATPAF1-204ENST00000474020 APOHP02749 345 aaPredicted RBP4.51□□□□□ -1.69
ATPAF1-204ENST00000474020 CSN3P07498 182 aa4.51□□□□□ -1.69
ATPAF1-204ENST00000474020 RIPPLY3P57055 190 aa4.51□□□□□ -1.69
ATPAF1-204ENST00000474020 LY6EQ16553 131 aa4.51□□□□□ -1.69
ATPAF1-204ENST00000474020 FAM106AQ4KMX7 169 aa4.51□□□□□ -1.69
ATPAF1-204ENST00000474020 COL5A1-AS1Q5SY13 56 aa4.51□□□□□ -1.69
ATPAF1-204ENST00000474020 FAM104BQ5XKR9 115 aa4.51□□□□□ -1.69
ATPAF1-204ENST00000474020 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.51□□□□□ -1.69
ATPAF1-204ENST00000474020 BRD3OSQ6XYD6 125 aa4.51□□□□□ -1.69
ATPAF1-204ENST00000474020 TEX29Q8N6K0 151 aa4.51□□□□□ -1.69
ATPAF1-204ENST00000474020 Q8TAT8 98 aa4.51□□□□□ -1.69
ATPAF1-204ENST00000474020 LINC00477Q96M19 166 aa4.51□□□□□ -1.69
ATPAF1-204ENST00000474020 PMCHL2Q9BQD1 86 aa4.51□□□□□ -1.69
ATPAF1-204ENST00000474020 NPFFR1Q9GZQ6 430 aa4.51□□□□□ -1.69
ATPAF1-204ENST00000474020 ST20Q9HBF5 79 aa4.51□□□□□ -1.69
ATPAF1-204ENST00000474020 NXT2Q9NPJ8 142 aaKnown RBP4.51□□□□□ -1.69
ATPAF1-204ENST00000474020 ZNF580Q9UK33 172 aa4.51□□□□□ -1.69
ATPAF1-204ENST00000474020 TIMM8BQ9Y5J9 83 aaPredicted RBP4.51□□□□□ -1.69
ATPAF1-204ENST00000474020 CREBBPQ92793 2442 aa4.51□□□□□ -1.69
ATPAF1-204ENST00000474020 PRRC2CQ9Y520 2896 aaKnown RBP4.5□□□□□ -1.69
ATPAF1-204ENST00000474020 IGHV3OR16-8A0A075B7F1 116 aa4.5□□□□□ -1.69
ATPAF1-204ENST00000474020 IGHV3-66A0A0C4DH42 116 aa4.5□□□□□ -1.69
ATPAF1-204ENST00000474020 A0A1B0GV90 55 aa4.5□□□□□ -1.69
ATPAF1-204ENST00000474020 TMEM89A2RUT3 159 aa4.5□□□□□ -1.69
ATPAF1-204ENST00000474020 OR4C46A6NHA9 309 aa4.5□□□□□ -1.69
ATPAF1-204ENST00000474020 PRSS29PA6NIE9 313 aa4.5□□□□□ -1.69
ATPAF1-204ENST00000474020 D6R8Y8 96 aa4.5□□□□□ -1.69
ATPAF1-204ENST00000474020 F5H697 171 aa4.5□□□□□ -1.69
ATPAF1-204ENST00000474020 M0QZ24 198 aa4.5□□□□□ -1.69
ATPAF1-204ENST00000474020 BATFQ16520 125 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms