RNA–Protein interactions for RNA: ENST00000469939.1

TTC3-213, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-213ENST00000469939 CCL16O15467 120 aa1.86□□□□□ -2.11
TTC3-213ENST00000469939 NCR2O95944 276 aa1.86□□□□□ -2.11
TTC3-213ENST00000469939 KRTAP12-1P59990 96 aa1.86□□□□□ -2.11
TTC3-213ENST00000469939 COPZ1P61923 177 aa1.86□□□□□ -2.11
TTC3-213ENST00000469939 MIR22HGQ0VDD5 57 aa1.86□□□□□ -2.11
TTC3-213ENST00000469939 KRTAP5-7Q6L8G8 165 aa1.86□□□□□ -2.11
TTC3-213ENST00000469939 CASC2Q6XLA1 102 aa1.86□□□□□ -2.11
TTC3-213ENST00000469939 C3orf62Q6ZUJ4 267 aa1.86□□□□□ -2.11
TTC3-213ENST00000469939 GKN2Q86XP6 184 aa1.86□□□□□ -2.11
TTC3-213ENST00000469939 MPC1Q9Y5U8 109 aa1.86□□□□□ -2.11
TTC3-213ENST00000469939 ARFGEF3Q5TH69 2177 aa1.86□□□□□ -2.11
TTC3-213ENST00000469939 WDR97A6NE52 1622 aa1.85□□□□□ -2.11
TTC3-213ENST00000469939 LOC107984156A0A0G2JMH3 177 aa1.85□□□□□ -2.11
TTC3-213ENST00000469939 CKS2P33552 79 aa1.85□□□□□ -2.11
TTC3-213ENST00000469939 ETV6P41212 452 aa1.85□□□□□ -2.11
TTC3-213ENST00000469939 CLLU1Q5K131 121 aa1.85□□□□□ -2.11
TTC3-213ENST00000469939 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.85□□□□□ -2.11
TTC3-213ENST00000469939 ARL17AQ8IVW1 177 aa1.85□□□□□ -2.11
TTC3-213ENST00000469939 C10orf111Q8N326 155 aa1.85□□□□□ -2.11
TTC3-213ENST00000469939 C1orf54Q8WWF1 131 aa1.85□□□□□ -2.11
TTC3-213ENST00000469939 SLC35B3Q9H1N7 401 aa1.85□□□□□ -2.11
TTC3-213ENST00000469939 LSM2Q9Y333 95 aaKnown RBP1.85□□□□□ -2.11
TTC3-213ENST00000469939 RB1CC1Q8TDY2 1594 aa1.85□□□□□ -2.11
TTC3-213ENST00000469939 CR1P17927 2039 aa1.84□□□□□ -2.11
TTC3-213ENST00000469939 FGD6Q6ZV73 1430 aa1.84□□□□□ -2.11
TTC3-213ENST00000469939 CECR2Q9BXF3 1484 aa1.84□□□□□ -2.11
TTC3-213ENST00000469939 MRC2Q9UBG0 1479 aa1.84□□□□□ -2.11
TTC3-213ENST00000469939 PNMA8CA0A1B0GUJ8 204 aa1.84□□□□□ -2.11
TTC3-213ENST00000469939 ZNF670-ZNF695F2Z2N8 137 aa1.84□□□□□ -2.11
TTC3-213ENST00000469939 M0R129 80 aa1.84□□□□□ -2.11
TTC3-213ENST00000469939 GNG7O60262 68 aa1.84□□□□□ -2.11
TTC3-213ENST00000469939 RRAS2P62070 204 aaPredicted RBP1.84□□□□□ -2.11
TTC3-213ENST00000469939 ASB16-AS1Q495Z4 193 aa1.84□□□□□ -2.11
TTC3-213ENST00000469939 ZNF431Q8TF32 576 aaPredicted RBP1.84□□□□□ -2.11
TTC3-213ENST00000469939 CIB3Q96Q77 187 aaPredicted RBP1.84□□□□□ -2.11
TTC3-213ENST00000469939 NAA38Q9BRA0 125 aaKnown RBP1.84□□□□□ -2.11
TTC3-213ENST00000469939 LINC00470Q9BZP3 86 aa1.84□□□□□ -2.11
TTC3-213ENST00000469939 CDC42SE1Q9NRR8 79 aa1.84□□□□□ -2.11
TTC3-213ENST00000469939 ORMDL1Q9P0S3 153 aa1.84□□□□□ -2.11
TTC3-213ENST00000469939 KLK9Q9UKQ9 250 aa1.84□□□□□ -2.11
TTC3-213ENST00000469939 HELZP42694 1942 aaKnown RBP1.83□□□□□ -2.12
TTC3-213ENST00000469939 MYH13Q9UKX3 1938 aa1.83□□□□□ -2.12
TTC3-213ENST00000469939 CEP162Q5TB80 1403 aa1.83□□□□□ -2.12
TTC3-213ENST00000469939 ZNF518AQ6AHZ1 1483 aa1.83□□□□□ -2.12
TTC3-213ENST00000469939 IGHV1-24A0A0C4DH33 117 aa1.83□□□□□ -2.12
TTC3-213ENST00000469939 LINC00587B1AMM8 73 aa1.83□□□□□ -2.12
TTC3-213ENST00000469939 F8W1H4 67 aa1.83□□□□□ -2.12
TTC3-213ENST00000469939 TPST1O60507 370 aa1.83□□□□□ -2.12
TTC3-213ENST00000469939 MRPS14O60783 128 aaKnown RBP1.83□□□□□ -2.12
TTC3-213ENST00000469939 EDF1O60869 148 aaKnown RBP1.83□□□□□ -2.12
TTC3-213ENST00000469939 SELENOWP63302 87 aa1.83□□□□□ -2.12
TTC3-213ENST00000469939 NEDD8Q15843 81 aa1.83□□□□□ -2.12
TTC3-213ENST00000469939 WHAMMP3Q1A5X7 153 aa1.83□□□□□ -2.12
TTC3-213ENST00000469939 IDO2Q6ZQW0 420 aa1.83□□□□□ -2.12
TTC3-213ENST00000469939 OR10AG1Q8NH19 301 aa1.83□□□□□ -2.12
TTC3-213ENST00000469939 ARL11Q969Q4 196 aa1.83□□□□□ -2.12
TTC3-213ENST00000469939 PTPRFP10586 1907 aa1.83□□□□□ -2.12
TTC3-213ENST00000469939 MYH6P13533 1939 aa1.83□□□□□ -2.12
TTC3-213ENST00000469939 RIMS1Q86UR5 1692 aaKnown RBP1.83□□□□□ -2.12
TTC3-213ENST00000469939 HIVEP2P31629 2446 aa1.82□□□□□ -2.12
TTC3-213ENST00000469939 EXPH5Q8NEV8 1989 aa1.82□□□□□ -2.12
TTC3-213ENST00000469939 TRBV6-4A0A1B0GX49 114 aa1.82□□□□□ -2.12
TTC3-213ENST00000469939 COX7CP15954 63 aa1.82□□□□□ -2.12
TTC3-213ENST00000469939 FAM74A1Q5RGS3 127 aa1.82□□□□□ -2.12
TTC3-213ENST00000469939 PHLPP1O60346 1717 aa1.82□□□□□ -2.12
TTC3-213ENST00000469939 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.82□□□□□ -2.12
TTC3-213ENST00000469939 ERBINQ96RT1 1412 aa1.82□□□□□ -2.12
TTC3-213ENST00000469939 THOC2Q8NI27 1593 aaKnown RBP1.81□□□□□ -2.12
TTC3-213ENST00000469939 TRBV20-1A0A075B6N2 111 aa1.81□□□□□ -2.12
TTC3-213ENST00000469939 PVALEFA0A1B0GWK0 134 aa1.81□□□□□ -2.12
TTC3-213ENST00000469939 IFITM5A6NNB3 132 aa1.81□□□□□ -2.12
TTC3-213ENST00000469939 DLEU1O43261 78 aa1.81□□□□□ -2.12
TTC3-213ENST00000469939 HCRTO43612 131 aa1.81□□□□□ -2.12
TTC3-213ENST00000469939 PLGLB1Q02325 96 aa1.81□□□□□ -2.12
TTC3-213ENST00000469939 IZUMO2Q6UXV1 221 aa1.81□□□□□ -2.12
TTC3-213ENST00000469939 ZNF563Q8TA94 476 aa1.81□□□□□ -2.12
TTC3-213ENST00000469939 SDF2Q99470 211 aa1.81□□□□□ -2.12
TTC3-213ENST00000469939 SMIM7Q9BQ49 75 aa1.81□□□□□ -2.12
TTC3-213ENST00000469939 MED9Q9NWA0 146 aa1.81□□□□□ -2.12
TTC3-213ENST00000469939 ALPK3Q96L96 1907 aa1.81□□□□□ -2.12
TTC3-213ENST00000469939 CASZ1Q86V15 1759 aa1.8□□□□□ -2.12
TTC3-213ENST00000469939 KIAA1549LQ6ZVL6 1849 aa1.8□□□□□ -2.12
TTC3-213ENST00000469939 CHD3Q12873 2000 aaKnown RBP1.8□□□□□ -2.12
TTC3-213ENST00000469939 NINQ8N4C6 2090 aa1.8□□□□□ -2.12
TTC3-213ENST00000469939 H3BRM9 83 aa1.8□□□□□ -2.12
TTC3-213ENST00000469939 RBP4P02753 201 aa1.8□□□□□ -2.12
TTC3-213ENST00000469939 EMX2Q04743 252 aa1.8□□□□□ -2.12
TTC3-213ENST00000469939 CCSMST1Q4G0I0 132 aa1.8□□□□□ -2.12
TTC3-213ENST00000469939 C2orf88Q9BSF0 95 aa1.8□□□□□ -2.12
TTC3-213ENST00000469939 CLIP1P30622 1438 aa1.8□□□□□ -2.12
TTC3-213ENST00000469939 MYOM3Q5VTT5 1437 aa1.8□□□□□ -2.12
TTC3-213ENST00000469939 GRIN2AQ12879 1464 aa1.8□□□□□ -2.12
TTC3-213ENST00000469939 TRPM7Q96QT4 1865 aa1.8□□□□□ -2.12
TTC3-213ENST00000469939 M0R2P5 195 aa1.79□□□□□ -2.12
TTC3-213ENST00000469939 CDC42EP2O14613 210 aa1.79□□□□□ -2.12
TTC3-213ENST00000469939 NUPR1O60356 82 aa1.79□□□□□ -2.12
TTC3-213ENST00000469939 YPEL1O60688 119 aa1.79□□□□□ -2.12
TTC3-213ENST00000469939 IGHV3-33P01772 117 aa1.79□□□□□ -2.12
TTC3-213ENST00000469939 APOC1P02654 83 aa1.79□□□□□ -2.12
TTC3-213ENST00000469939 MPV17LQ2QL34 196 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms