RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 NMBP08949 121 aa13.4□□□□□ -0.26
COL7A1-207ENST00000467985 OR10J4P0C629 311 aa13.4□□□□□ -0.26
COL7A1-207ENST00000467985 ARL14EPLP0DKL9 152 aa13.4□□□□□ -0.26
COL7A1-207ENST00000467985 SULT1A2P50226 295 aa13.4□□□□□ -0.26
COL7A1-207ENST00000467985 TMEM78Q5T7P6 136 aa13.4□□□□□ -0.26
COL7A1-207ENST00000467985 LINC00612Q8N6U2 182 aa13.4□□□□□ -0.26
COL7A1-207ENST00000467985 FAM19A4Q96LR4 140 aa13.4□□□□□ -0.26
COL7A1-207ENST00000467985 MAP1LC3BQ9GZQ8 125 aa13.4□□□□□ -0.26
COL7A1-207ENST00000467985 AGPAT4-IT1Q9H0P7 198 aa13.4□□□□□ -0.26
COL7A1-207ENST00000467985 IGLV2-18A0A075B6J9 118 aa13.39□□□□□ -0.27
COL7A1-207ENST00000467985 NUDT3O95989 172 aa13.39□□□□□ -0.27
COL7A1-207ENST00000467985 FHITP49789 147 aa13.39□□□□□ -0.27
COL7A1-207ENST00000467985 DAZ2Q13117 558 aaKnown RBP13.39□□□□□ -0.27
COL7A1-207ENST00000467985 SOHLH1Q5JUK2 328 aa13.39□□□□□ -0.27
COL7A1-207ENST00000467985 Q6ZR54 194 aa13.39□□□□□ -0.27
COL7A1-207ENST00000467985 ZNF680Q8NEM1 530 aa13.39□□□□□ -0.27
COL7A1-207ENST00000467985 RNF141Q8WVD5 230 aa13.39□□□□□ -0.27
COL7A1-207ENST00000467985 FXYD5Q96DB9 178 aa13.39□□□□□ -0.27
COL7A1-207ENST00000467985 LINC00467Q9BRT7 94 aa13.39□□□□□ -0.27
COL7A1-207ENST00000467985 TEX46H3BTG2 121 aa13.38□□□□□ -0.27
COL7A1-207ENST00000467985 IFNA7P01567 189 aa13.38□□□□□ -0.27
COL7A1-207ENST00000467985 H2AFB1P0C5Y9 115 aa13.38□□□□□ -0.27
COL7A1-207ENST00000467985 STAG3L2P0CL84 134 aa13.38□□□□□ -0.27
COL7A1-207ENST00000467985 STAG3L3P0CL85 134 aa13.38□□□□□ -0.27
COL7A1-207ENST00000467985 CRISP2P16562 243 aa13.38□□□□□ -0.27
COL7A1-207ENST00000467985 LYPD1Q8N2G4 141 aa13.38□□□□□ -0.27
COL7A1-207ENST00000467985 SFT2D1Q8WV19 159 aa13.38□□□□□ -0.27
COL7A1-207ENST00000467985 PKHD1P08F94 4074 aa13.38□□□□□ -0.27
COL7A1-207ENST00000467985 NACAE9PAV3 2078 aa13.37□□□□□ -0.27
COL7A1-207ENST00000467985 A0A1B0GV50 99 aa13.37□□□□□ -0.27
COL7A1-207ENST00000467985 RTL8CO15255 209 aa13.37□□□□□ -0.27
COL7A1-207ENST00000467985 ZNF324O75467 553 aaPredicted RBP13.37□□□□□ -0.27
COL7A1-207ENST00000467985 GPX1P07203 203 aa13.37□□□□□ -0.27
COL7A1-207ENST00000467985 FGF8P55075 233 aaPredicted RBP13.37□□□□□ -0.27
COL7A1-207ENST00000467985 CCL18P55774 89 aa13.37□□□□□ -0.27
COL7A1-207ENST00000467985 ZNF726P1Q15940 193 aa13.37□□□□□ -0.27
COL7A1-207ENST00000467985 SSX7Q7RTT5 188 aa13.37□□□□□ -0.27
COL7A1-207ENST00000467985 TRBV7-9A0A0J9YWB2 115 aa13.36□□□□□ -0.27
COL7A1-207ENST00000467985 GAGE12BA1L429 117 aa13.36□□□□□ -0.27
COL7A1-207ENST00000467985 PRSS29PA6NIE9 313 aa13.36□□□□□ -0.27
COL7A1-207ENST00000467985 GAGE7O76087 117 aa13.36□□□□□ -0.27
COL7A1-207ENST00000467985 GAGE12FP0CL80 117 aa13.36□□□□□ -0.27
COL7A1-207ENST00000467985 GAGE12GP0CL81 117 aa13.36□□□□□ -0.27
COL7A1-207ENST00000467985 GAGE12IP0CL82 117 aa13.36□□□□□ -0.27
COL7A1-207ENST00000467985 GCHFRP30047 84 aa13.36□□□□□ -0.27
COL7A1-207ENST00000467985 RNASE4P34096 147 aaKnown RBP13.36□□□□□ -0.27
COL7A1-207ENST00000467985 CSN1S1P47710 185 aa13.36□□□□□ -0.27
COL7A1-207ENST00000467985 ANXA2RQ3ZCQ2 193 aa13.36□□□□□ -0.27
COL7A1-207ENST00000467985 TEX261Q6UWH6 196 aa13.36□□□□□ -0.27
COL7A1-207ENST00000467985 EIF4E3Q8N5X7 224 aaKnown RBP13.36□□□□□ -0.27
COL7A1-207ENST00000467985 ZNF503Q96F45 646 aa13.36□□□□□ -0.27
COL7A1-207ENST00000467985 TMEM167BQ9NRX6 74 aa13.36□□□□□ -0.27
COL7A1-207ENST00000467985 IGKV2-40A0A087WW87 121 aaPredicted RBP13.35□□□□□ -0.27
COL7A1-207ENST00000467985 IGKV2D-40P01614 121 aaPredicted RBP13.35□□□□□ -0.27
COL7A1-207ENST00000467985 ZNF138P52744 262 aa13.35□□□□□ -0.27
COL7A1-207ENST00000467985 BLOC1S1P78537 153 aa13.35□□□□□ -0.27
COL7A1-207ENST00000467985 BTN1A1Q13410 526 aa13.35□□□□□ -0.27
COL7A1-207ENST00000467985 OR5I1Q13606 314 aa13.35□□□□□ -0.27
COL7A1-207ENST00000467985 VGLL1Q99990 258 aa13.35□□□□□ -0.27
COL7A1-207ENST00000467985 ZNF492Q9P255 531 aa13.35□□□□□ -0.27
COL7A1-207ENST00000467985 RBAKDNA6NC62 111 aa13.34□□□□□ -0.27
COL7A1-207ENST00000467985 HERC2O95714 4834 aa13.34□□□□□ -0.27
COL7A1-207ENST00000467985 PKD1P98161 4303 aa13.33□□□□□ -0.27
COL7A1-207ENST00000467985 TRAV26-1A0A087WT03 109 aa13.33□□□□□ -0.28
COL7A1-207ENST00000467985 A0A1B0GVY2 172 aa13.33□□□□□ -0.28
COL7A1-207ENST00000467985 H3BNG1 76 aa13.33□□□□□ -0.28
COL7A1-207ENST00000467985 RGS13O14921 159 aa13.33□□□□□ -0.28
COL7A1-207ENST00000467985 RANP62826 216 aaKnown RBP13.33□□□□□ -0.28
COL7A1-207ENST00000467985 C1orf134Q5TEV5 83 aa13.33□□□□□ -0.28
COL7A1-207ENST00000467985 ZFAND2AQ8N6M9 145 aa13.33□□□□□ -0.28
COL7A1-207ENST00000467985 RXFP4Q8TDU9 374 aa13.33□□□□□ -0.28
COL7A1-207ENST00000467985 MBD3L1Q8WWY6 194 aa13.33□□□□□ -0.28
COL7A1-207ENST00000467985 C18orf15Q96N68 181 aa13.33□□□□□ -0.28
COL7A1-207ENST00000467985 GSN-AS1Q9NRJ2 163 aa13.33□□□□□ -0.28
COL7A1-207ENST00000467985 TRGV2A0A075B6R0 118 aa13.32□□□□□ -0.28
COL7A1-207ENST00000467985 IBA57Q5T440 356 aaKnown RBP13.32□□□□□ -0.28
COL7A1-207ENST00000467985 Q6ZTI0 123 aa13.32□□□□□ -0.28
COL7A1-207ENST00000467985 C11orf72Q8NBR9 251 aa13.32□□□□□ -0.28
COL7A1-207ENST00000467985 ZNRF2Q8NHG8 242 aa13.32□□□□□ -0.28
COL7A1-207ENST00000467985 Q9H3A6 140 aa13.32□□□□□ -0.28
COL7A1-207ENST00000467985 TMPRSS5Q9H3S3 457 aa13.32□□□□□ -0.28
COL7A1-207ENST00000467985 HOXA5P20719 270 aa13.31□□□□□ -0.28
COL7A1-207ENST00000467985 LINC00588Q9Y4M8 146 aa13.31□□□□□ -0.28
COL7A1-207ENST00000467985 IGHV1OR15-1A0A075B7D0 117 aa13.3□□□□□ -0.28
COL7A1-207ENST00000467985 TRGV1A0A0A0MS02 117 aa13.3□□□□□ -0.28
COL7A1-207ENST00000467985 NBDYA0A0U1RRE5 68 aa13.3□□□□□ -0.28
COL7A1-207ENST00000467985 PPT1P50897 306 aa13.3□□□□□ -0.28
COL7A1-207ENST00000467985 TCL1AP56279 114 aa13.3□□□□□ -0.28
COL7A1-207ENST00000467985 UBE2G2P60604 165 aa13.3□□□□□ -0.28
COL7A1-207ENST00000467985 LENEPQ9Y5L5 61 aa13.3□□□□□ -0.28
COL7A1-207ENST00000467985 SPINK4O60575 86 aa13.29□□□□□ -0.28
COL7A1-207ENST00000467985 RAB14P61106 215 aa13.29□□□□□ -0.28
COL7A1-207ENST00000467985 PRR9Q5T870 116 aa13.29□□□□□ -0.28
COL7A1-207ENST00000467985 Q8TAT8 98 aa13.29□□□□□ -0.28
COL7A1-207ENST00000467985 CMTM2Q8TAZ6 248 aa13.29□□□□□ -0.28
COL7A1-207ENST00000467985 OTORQ9NRC9 128 aa13.29□□□□□ -0.28
COL7A1-207ENST00000467985 TRAV1-1A0A0B4J248 108 aa13.28□□□□□ -0.28
COL7A1-207ENST00000467985 A0A0J9YY99 117 aa13.28□□□□□ -0.28
COL7A1-207ENST00000467985 DIRC3C9JPN6 131 aa13.28□□□□□ -0.28
COL7A1-207ENST00000467985 IFNA1P01562 189 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms