RNA–Protein interactions for RNA: ENST00000462673.1

USP4-207, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 709 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-207ENST00000462673 BMI1P35226 326 aa5.98□□□□□ -1.45
USP4-207ENST00000462673 ARL3P36405 182 aa5.98□□□□□ -1.45
USP4-207ENST00000462673 SEC11AP67812 179 aa5.98□□□□□ -1.45
USP4-207ENST00000462673 MAJINQ3KP22 176 aa5.98□□□□□ -1.45
USP4-207ENST00000462673 OCIAD2Q56VL3 154 aa5.98□□□□□ -1.45
USP4-207ENST00000462673 BVES-AS1Q5T3Y7 98 aa5.98□□□□□ -1.45
USP4-207ENST00000462673 C9orf66Q5T8R8 295 aa5.98□□□□□ -1.45
USP4-207ENST00000462673 PRR27Q6MZM9 219 aa5.98□□□□□ -1.45
USP4-207ENST00000462673 GPHB5Q86YW7 130 aa5.98□□□□□ -1.45
USP4-207ENST00000462673 NHLRC2Q8NBF2 726 aa5.98□□□□□ -1.45
USP4-207ENST00000462673 NUP35Q8NFH5 326 aa5.98□□□□□ -1.45
USP4-207ENST00000462673 CACNG8Q8WXS5 425 aa5.98□□□□□ -1.45
USP4-207ENST00000462673 ZNF503Q96F45 646 aa5.98□□□□□ -1.45
USP4-207ENST00000462673 RAX2Q96IS3 184 aa5.98□□□□□ -1.45
USP4-207ENST00000462673 SLC25A2Q9BXI2 301 aa5.98□□□□□ -1.45
USP4-207ENST00000462673 RPP21Q9H633 154 aaKnown RBP5.98□□□□□ -1.45
USP4-207ENST00000462673 CLEC5AQ9NY25 188 aa5.98□□□□□ -1.45
USP4-207ENST00000462673 HSPB8Q9UJY1 196 aa5.98□□□□□ -1.45
USP4-207ENST00000462673 IGHV1-24A0A0C4DH33 117 aa5.97□□□□□ -1.45
USP4-207ENST00000462673 CBY3A6NI87 242 aa5.97□□□□□ -1.45
USP4-207ENST00000462673 A8MWL6 223 aa5.97□□□□□ -1.45
USP4-207ENST00000462673 SYS1-DBNDD2H3BUS1 97 aa5.97□□□□□ -1.45
USP4-207ENST00000462673 LEPROTL1O95214 131 aa5.97□□□□□ -1.45
USP4-207ENST00000462673 HOXD3P31249 432 aaPredicted RBP5.97□□□□□ -1.45
USP4-207ENST00000462673 CD69Q07108 199 aa5.97□□□□□ -1.45
USP4-207ENST00000462673 FHL3Q13643 280 aa5.97□□□□□ -1.45
USP4-207ENST00000462673 CLEC19AQ6UXS0 136 aa5.97□□□□□ -1.45
USP4-207ENST00000462673 LINC00482Q8N8I6 264 aa5.97□□□□□ -1.45
USP4-207ENST00000462673 NUDT10Q8NFP7 164 aa5.97□□□□□ -1.45
USP4-207ENST00000462673 PAXXQ9BUH6 204 aa5.97□□□□□ -1.45
USP4-207ENST00000462673 MAP1LC3CQ9BXW4 147 aa5.97□□□□□ -1.45
USP4-207ENST00000462673 SCRT2Q9NQ03 307 aa5.97□□□□□ -1.45
USP4-207ENST00000462673 UFC1Q9Y3C8 167 aa5.97□□□□□ -1.45
USP4-207ENST00000462673 IGHV4OR15-8A0A075B7B6 117 aa5.96□□□□□ -1.46
USP4-207ENST00000462673 A0A087WW49 117 aa5.96□□□□□ -1.46
USP4-207ENST00000462673 MUC21A0A0G2JKD1 596 aa5.96□□□□□ -1.46
USP4-207ENST00000462673 MUC21A0A140T8X8 626 aa5.96□□□□□ -1.46
USP4-207ENST00000462673 A6NDN8 102 aa5.96□□□□□ -1.46
USP4-207ENST00000462673 HIGD1CA8MV81 97 aa5.96□□□□□ -1.46
USP4-207ENST00000462673 LGALS9O00182 355 aa5.96□□□□□ -1.46
USP4-207ENST00000462673 CHEK1O14757 476 aa5.96□□□□□ -1.46
USP4-207ENST00000462673 CA1P00915 261 aaPredicted RBP5.96□□□□□ -1.46
USP4-207ENST00000462673 RNASE2P10153 161 aaKnown RBP5.96□□□□□ -1.46
USP4-207ENST00000462673 PSG1P11464 419 aa5.96□□□□□ -1.46
USP4-207ENST00000462673 MPV17L2Q567V2 206 aa5.96□□□□□ -1.46
USP4-207ENST00000462673 MUC21Q5SSG8 566 aa5.96□□□□□ -1.46
USP4-207ENST00000462673 C10orf113Q5VZT2 155 aa5.96□□□□□ -1.46
USP4-207ENST00000462673 Q6ZVH6 145 aa5.96□□□□□ -1.46
USP4-207ENST00000462673 GTF2H5Q6ZYL4 71 aa5.96□□□□□ -1.46
USP4-207ENST00000462673 S100A7AQ86SG5 101 aa5.96□□□□□ -1.46
USP4-207ENST00000462673 BPIFA4PQ86YQ2 179 aa5.96□□□□□ -1.46
USP4-207ENST00000462673 STXBP6Q8NFX7 210 aa5.96□□□□□ -1.46
USP4-207ENST00000462673 OR9G4Q8NGQ1 327 aa5.96□□□□□ -1.46
USP4-207ENST00000462673 ZNF502Q8TBZ5 544 aa5.96□□□□□ -1.46
USP4-207ENST00000462673 NUDT11Q96G61 164 aa5.96□□□□□ -1.46
USP4-207ENST00000462673 FMC1Q96HJ9 113 aa5.96□□□□□ -1.46
USP4-207ENST00000462673 FAM167A-AS1Q96KT0 104 aa5.96□□□□□ -1.46
USP4-207ENST00000462673 AP1S3Q96PC3 154 aa5.96□□□□□ -1.46
USP4-207ENST00000462673 GFRA4Q9GZZ7 299 aa5.96□□□□□ -1.46
USP4-207ENST00000462673 FAM231BA6NCW3 169 aa5.95□□□□□ -1.46
USP4-207ENST00000462673 OR2T8A6NH00 312 aa5.95□□□□□ -1.46
USP4-207ENST00000462673 I3L2K1 104 aa5.95□□□□□ -1.46
USP4-207ENST00000462673 NDUFA4O00483 81 aa5.95□□□□□ -1.46
USP4-207ENST00000462673 NUDT3O95989 172 aa5.95□□□□□ -1.46
USP4-207ENST00000462673 P01737 135 aa5.95□□□□□ -1.46
USP4-207ENST00000462673 SLC25A5P05141 298 aaKnown RBP5.95□□□□□ -1.46
USP4-207ENST00000462673 GPR183P32249 361 aa5.95□□□□□ -1.46
USP4-207ENST00000462673 DEFB136Q30KP8 78 aa5.95□□□□□ -1.46
USP4-207ENST00000462673 GDF5OSQ5U4N7 250 aa5.95□□□□□ -1.46
USP4-207ENST00000462673 PVRIGQ6DKI7 326 aa5.95□□□□□ -1.46
USP4-207ENST00000462673 RBPMS2Q6ZRY4 209 aaKnown RBP5.95□□□□□ -1.46
USP4-207ENST00000462673 C18orf65Q6ZTR6 163 aa5.95□□□□□ -1.46
USP4-207ENST00000462673 SPATA12Q7Z6I5 190 aa5.95□□□□□ -1.46
USP4-207ENST00000462673 THAP8Q8NA92 274 aa5.95□□□□□ -1.46
USP4-207ENST00000462673 DLX4Q92988 240 aaPredicted RBP5.95□□□□□ -1.46
USP4-207ENST00000462673 SSBP4Q9BWG4 385 aaPredicted RBP5.95□□□□□ -1.46
USP4-207ENST00000462673 SIGLEC8Q9NYZ4 499 aa5.95□□□□□ -1.46
USP4-207ENST00000462673 RNF24Q9Y225 148 aa5.95□□□□□ -1.46
USP4-207ENST00000462673 LOC102724200A0A096LPH7 203 aaPredicted RBP5.94□□□□□ -1.46
USP4-207ENST00000462673 A0A1B0GW15 77 aa5.94□□□□□ -1.46
USP4-207ENST00000462673 hDV102S1A0JD36 115 aa5.94□□□□□ -1.46
USP4-207ENST00000462673 K7EIM0 57 aa5.94□□□□□ -1.46
USP4-207ENST00000462673 K7EMT4 169 aa5.94□□□□□ -1.46
USP4-207ENST00000462673 SAP30O75446 220 aa5.94□□□□□ -1.46
USP4-207ENST00000462673 IGHV3-23P01764 117 aa5.94□□□□□ -1.46
USP4-207ENST00000462673 COX8AP10176 69 aa5.94□□□□□ -1.46
USP4-207ENST00000462673 CAMPP49913 170 aa5.94□□□□□ -1.46
USP4-207ENST00000462673 SYNJ2BPP57105 145 aa5.94□□□□□ -1.46
USP4-207ENST00000462673 PSG9Q00887 426 aa5.94□□□□□ -1.46
USP4-207ENST00000462673 LINC01545Q5VT33 79 aa5.94□□□□□ -1.46
USP4-207ENST00000462673 TCF24Q7RTU0 167 aa5.94□□□□□ -1.46
USP4-207ENST00000462673 C5orf17Q8NAS9 161 aa5.94□□□□□ -1.46
USP4-207ENST00000462673 TMEM116Q8NCL8 245 aa5.94□□□□□ -1.46
USP4-207ENST00000462673 OR2K2Q8NGT1 345 aa5.94□□□□□ -1.46
USP4-207ENST00000462673 URB1-AS1Q96HZ7 61 aa5.94□□□□□ -1.46
USP4-207ENST00000462673 DUX3Q96PT4 197 aa5.94□□□□□ -1.46
USP4-207ENST00000462673 PLXNB1O43157 2135 aa5.93□□□□□ -1.46
USP4-207ENST00000462673 IGKV1OR2-108A0A075B7D4 117 aa5.93□□□□□ -1.46
USP4-207ENST00000462673 C7orf71A4D174 169 aa5.93□□□□□ -1.46
USP4-207ENST00000462673 CTSGP08311 255 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms