RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 CST9LQ9H4G1 147 aa14.12□□□□□ -0.15
SEMA3B-209ENST00000456560 TRAV40A0A0B4J280 105 aa14.11□□□□□ -0.15
SEMA3B-209ENST00000456560 COTL1Q14019 142 aa14.11□□□□□ -0.15
SEMA3B-209ENST00000456560 MRPL51Q4U2R6 128 aaKnown RBP14.11□□□□□ -0.15
SEMA3B-209ENST00000456560 A1L4Q6 167 aa14.11□□□□□ -0.15
SEMA3B-209ENST00000456560 NDUFS8O00217 210 aa14.11□□□□□ -0.15
SEMA3B-209ENST00000456560 ZNF207O43670 478 aaKnown RBP14.11□□□□□ -0.15
SEMA3B-209ENST00000456560 NCR2O95944 276 aa14.11□□□□□ -0.15
SEMA3B-209ENST00000456560 OR10AG1Q8NH19 301 aa14.11□□□□□ -0.15
SEMA3B-209ENST00000456560 PRELID3AQ96N28 172 aa14.11□□□□□ -0.15
SEMA3B-209ENST00000456560 SNAI2O43623 268 aa14.1□□□□□ -0.15
SEMA3B-209ENST00000456560 LINC01559Q495D7 138 aa14.1□□□□□ -0.15
SEMA3B-209ENST00000456560 ORMDL3Q8N138 153 aa14.1□□□□□ -0.15
SEMA3B-209ENST00000456560 MRPL53Q96EL3 112 aaKnown RBP14.1□□□□□ -0.15
SEMA3B-209ENST00000456560 CNFNQ9BYD5 112 aa14.1□□□□□ -0.15
SEMA3B-209ENST00000456560 AGPAT4-IT1Q9H0P7 198 aa14.1□□□□□ -0.15
SEMA3B-209ENST00000456560 LINC00527Q9UJ94 153 aa14.1□□□□□ -0.15
SEMA3B-209ENST00000456560 IGHV3-49A0A0A0MS15 119 aa14.1□□□□□ -0.15
SEMA3B-209ENST00000456560 ORM1P02763 201 aa14.1□□□□□ -0.15
SEMA3B-209ENST00000456560 IFI27P40305 119 aaPredicted RBP14.1□□□□□ -0.15
SEMA3B-209ENST00000456560 OCIAD2Q56VL3 154 aa14.1□□□□□ -0.15
SEMA3B-209ENST00000456560 IL17RELQ6ZVW7 336 aa14.1□□□□□ -0.15
SEMA3B-209ENST00000456560 SIGLEC8Q9NYZ4 499 aa14.1□□□□□ -0.15
SEMA3B-209ENST00000456560 IGHV4-38-2P0DP08 117 aa14.09□□□□□ -0.15
SEMA3B-209ENST00000456560 FOXE3Q13461 319 aa14.09□□□□□ -0.15
SEMA3B-209ENST00000456560 TWIST1Q15672 202 aa14.09□□□□□ -0.15
SEMA3B-209ENST00000456560 FAM106AQ4KMX7 169 aa14.09□□□□□ -0.15
SEMA3B-209ENST00000456560 C8orf86Q6ZUL3 223 aa14.09□□□□□ -0.15
SEMA3B-209ENST00000456560 C2orf91Q6ZV80 131 aa14.09□□□□□ -0.15
SEMA3B-209ENST00000456560 TRGV3P03979 118 aa14.09□□□□□ -0.15
SEMA3B-209ENST00000456560 IGF1P05019 195 aa14.09□□□□□ -0.15
SEMA3B-209ENST00000456560 PEF1Q9UBV8 284 aaKnown RBP14.09□□□□□ -0.15
SEMA3B-209ENST00000456560 PPBPP02775 128 aa14.08□□□□□ -0.16
SEMA3B-209ENST00000456560 VPS25Q9BRG1 176 aa14.08□□□□□ -0.16
SEMA3B-209ENST00000456560 TENM4Q6N022 2769 aa14.08□□□□□ -0.16
SEMA3B-209ENST00000456560 A0A096LNJ9 63 aa14.07□□□□□ -0.16
SEMA3B-209ENST00000456560 TRAV8-6A0A0B4J262 113 aa14.07□□□□□ -0.16
SEMA3B-209ENST00000456560 LOXL1Q08397 574 aaPredicted RBP14.07□□□□□ -0.16
SEMA3B-209ENST00000456560 CLEC2AQ6UVW9 174 aa14.07□□□□□ -0.16
SEMA3B-209ENST00000456560 OR8A1Q8NGG7 326 aa14.07□□□□□ -0.16
SEMA3B-209ENST00000456560 HIF1ANQ9NWT6 349 aa14.07□□□□□ -0.16
SEMA3B-209ENST00000456560 ASH1LQ9NR48 2969 aaKnown RBP14.07□□□□□ -0.16
SEMA3B-209ENST00000456560 IGHV4-30-2A0A087WSY4 118 aa14.07□□□□□ -0.16
SEMA3B-209ENST00000456560 LOC389332A0A1B0GUA5 103 aa14.07□□□□□ -0.16
SEMA3B-209ENST00000456560 C7orf71A4D174 169 aa14.07□□□□□ -0.16
SEMA3B-209ENST00000456560 A6NDX4 124 aa14.07□□□□□ -0.16
SEMA3B-209ENST00000456560 BRI3O95415 125 aa14.07□□□□□ -0.16
SEMA3B-209ENST00000456560 GLMPQ8WWB7 406 aa14.07□□□□□ -0.16
SEMA3B-209ENST00000456560 MSRB1Q9NZV6 116 aa14.07□□□□□ -0.16
SEMA3B-209ENST00000456560 ARL3P36405 182 aa14.06□□□□□ -0.16
SEMA3B-209ENST00000456560 ATP5J2P56134 94 aa14.06□□□□□ -0.16
SEMA3B-209ENST00000456560 TMEM97Q5BJF2 176 aa14.06□□□□□ -0.16
SEMA3B-209ENST00000456560 RNF185Q96GF1 192 aa14.06□□□□□ -0.16
SEMA3B-209ENST00000456560 IGHG2P01859 326 aa14.06□□□□□ -0.16
SEMA3B-209ENST00000456560 PPIFP30405 207 aaKnown RBP14.06□□□□□ -0.16
SEMA3B-209ENST00000456560 C9orf47Q6ZRZ4 202 aa14.06□□□□□ -0.16
SEMA3B-209ENST00000456560 C11orf21Q9P2W6 132 aa14.06□□□□□ -0.16
SEMA3B-209ENST00000456560 IGKV3D-20A0A0C4DH25 116 aa14.05□□□□□ -0.16
SEMA3B-209ENST00000456560 LY6EQ16553 131 aa14.05□□□□□ -0.16
SEMA3B-209ENST00000456560 GAGE12BA1L429 117 aa14.05□□□□□ -0.16
SEMA3B-209ENST00000456560 SMKR1H3BMG3 65 aa14.05□□□□□ -0.16
SEMA3B-209ENST00000456560 NPYP01303 97 aa14.05□□□□□ -0.16
SEMA3B-209ENST00000456560 CKS2P33552 79 aa14.05□□□□□ -0.16
SEMA3B-209ENST00000456560 SEC11AP67812 179 aa14.05□□□□□ -0.16
SEMA3B-209ENST00000456560 TMEM78Q5T7P6 136 aa14.05□□□□□ -0.16
SEMA3B-209ENST00000456560 H3BUA1 57 aa14.04□□□□□ -0.16
SEMA3B-209ENST00000456560 H3BUX3 64 aa14.04□□□□□ -0.16
SEMA3B-209ENST00000456560 TRBV12-3P01733 135 aa14.04□□□□□ -0.16
SEMA3B-209ENST00000456560 MSMBP08118 114 aa14.03□□□□□ -0.16
SEMA3B-209ENST00000456560 SVEP1Q4LDE5 3571 aa14.03□□□□□ -0.16
SEMA3B-209ENST00000456560 NDUFA4O00483 81 aa14.03□□□□□ -0.16
SEMA3B-209ENST00000456560 FGF6P10767 208 aa14.03□□□□□ -0.16
SEMA3B-209ENST00000456560 UNQ9165/PRO28630Q6UXU0 137 aa14.03□□□□□ -0.16
SEMA3B-209ENST00000456560 USMG5Q96IX5 58 aa14.03□□□□□ -0.16
SEMA3B-209ENST00000456560 CENPEQ02224 2701 aa14.02□□□□□ -0.16
SEMA3B-209ENST00000456560 PLA2G2AP14555 144 aa14.02□□□□□ -0.16
SEMA3B-209ENST00000456560 DPF1Q92782 380 aa14.02□□□□□ -0.16
SEMA3B-209ENST00000456560 SMAD7O15105 426 aaKnown RBP14.02□□□□□ -0.17
SEMA3B-209ENST00000456560 C9orf139Q6ZV77 190 aa14.02□□□□□ -0.17
SEMA3B-209ENST00000456560 SMIM15Q7Z3B0 74 aa14.02□□□□□ -0.17
SEMA3B-209ENST00000456560 C16orf92Q96LL3 132 aa14.02□□□□□ -0.17
SEMA3B-209ENST00000456560 CSMD2Q7Z408 3487 aa14.02□□□□□ -0.17
SEMA3B-209ENST00000456560 GAGE10A6NGK3 116 aa14.01□□□□□ -0.17
SEMA3B-209ENST00000456560 TCTAP57738 103 aa14.01□□□□□ -0.17
SEMA3B-209ENST00000456560 PRSS57Q6UWY2 283 aa14.01□□□□□ -0.17
SEMA3B-209ENST00000456560 GPHB5Q86YW7 130 aa14.01□□□□□ -0.17
SEMA3B-209ENST00000456560 OR1N2Q8NGR9 330 aa14.01□□□□□ -0.17
SEMA3B-209ENST00000456560 C20orf173Q96LM9 149 aa14.01□□□□□ -0.17
SEMA3B-209ENST00000456560 USP9YO00507 2555 aaPredicted RBP14.01□□□□□ -0.17
SEMA3B-209ENST00000456560 FXYD7P58549 80 aa14□□□□□ -0.17
SEMA3B-209ENST00000456560 CACNG7P62955 275 aa14□□□□□ -0.17
SEMA3B-209ENST00000456560 LGALS9BQ3B8N2 356 aa14□□□□□ -0.17
SEMA3B-209ENST00000456560 LGALS9CQ6DKI2 356 aa14□□□□□ -0.17
SEMA3B-209ENST00000456560 AP1S3Q96PC3 154 aa14□□□□□ -0.17
SEMA3B-209ENST00000456560 HELZ2Q9BYK8 2649 aaKnown RBP14□□□□□ -0.17
SEMA3B-209ENST00000456560 LINC01546A6NGU7 62 aa14□□□□□ -0.17
SEMA3B-209ENST00000456560 BLCAPP62952 87 aa14□□□□□ -0.17
SEMA3B-209ENST00000456560 NPFFR1Q9GZQ6 430 aa14□□□□□ -0.17
SEMA3B-209ENST00000456560 KLK15Q9H2R5 256 aa14□□□□□ -0.17
SEMA3B-209ENST00000456560 CELSR2Q9HCU4 2923 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms