RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 LOC400499M0QZD8 3231 aa10.59□□□□□ -0.71
PTPRE-204ENST00000455661 SPAARA0A1B0GVQ0 90 aa10.59□□□□□ -0.71
PTPRE-204ENST00000455661 E7EQL1 145 aa10.59□□□□□ -0.71
PTPRE-204ENST00000455661 CTSGP08311 255 aa10.59□□□□□ -0.71
PTPRE-204ENST00000455661 SPANXN1Q5VSR9 72 aa10.59□□□□□ -0.71
PTPRE-204ENST00000455661 TRIOBPQ9H2D6 2365 aa10.59□□□□□ -0.71
PTPRE-204ENST00000455661 SPENQ96T58 3664 aaKnown RBP10.58□□□□□ -0.72
PTPRE-204ENST00000455661 AGRNO00468 2067 aa10.58□□□□□ -0.72
PTPRE-204ENST00000455661 PRAC2D3DTV9 90 aa10.58□□□□□ -0.72
PTPRE-204ENST00000455661 Q5PR19 223 aa10.58□□□□□ -0.72
PTPRE-204ENST00000455661 MORN3Q6PF18 240 aaPredicted RBP10.58□□□□□ -0.72
PTPRE-204ENST00000455661 C20orf78Q9BR46 151 aa10.58□□□□□ -0.72
PTPRE-204ENST00000455661 RAXQ9Y2V3 346 aa10.58□□□□□ -0.72
PTPRE-204ENST00000455661 ORMDL2Q53FV1 153 aa10.58□□□□□ -0.72
PTPRE-204ENST00000455661 SYT8Q8NBV8 401 aa10.58□□□□□ -0.72
PTPRE-204ENST00000455661 SCGB3A1Q96QR1 104 aa10.58□□□□□ -0.72
PTPRE-204ENST00000455661 SLC50A1Q9BRV3 221 aa10.58□□□□□ -0.72
PTPRE-204ENST00000455661 GEMIN7Q9H840 131 aaKnown RBP10.58□□□□□ -0.72
PTPRE-204ENST00000455661 LYNX1G3V0Z9 82 aa10.57□□□□□ -0.72
PTPRE-204ENST00000455661 LYNX1P0DP58 116 aa10.57□□□□□ -0.72
PTPRE-204ENST00000455661 KLRD1Q13241 179 aa10.57□□□□□ -0.72
PTPRE-204ENST00000455661 CFAP126Q5VTH2 177 aa10.57□□□□□ -0.72
PTPRE-204ENST00000455661 B9A039 149 aa10.57□□□□□ -0.72
PTPRE-204ENST00000455661 TMEM78Q5T7P6 136 aa10.57□□□□□ -0.72
PTPRE-204ENST00000455661 C8orf86Q6ZUL3 223 aa10.57□□□□□ -0.72
PTPRE-204ENST00000455661 RNF182Q8N6D2 247 aa10.57□□□□□ -0.72
PTPRE-204ENST00000455661 ZFHX4Q86UP3 3567 aa10.57□□□□□ -0.72
PTPRE-204ENST00000455661 IGHV3OR16-8A0A075B7F1 116 aa10.56□□□□□ -0.72
PTPRE-204ENST00000455661 LGALS1P09382 135 aaKnown RBP10.56□□□□□ -0.72
PTPRE-204ENST00000455661 LYRM7Q5U5X0 104 aa10.56□□□□□ -0.72
PTPRE-204ENST00000455661 SMIM2Q9BVW6 85 aa10.56□□□□□ -0.72
PTPRE-204ENST00000455661 C11orf21Q9P2W6 132 aa10.56□□□□□ -0.72
PTPRE-204ENST00000455661 ROS1P08922 2347 aa10.56□□□□□ -0.72
PTPRE-204ENST00000455661 NCOR1O75376 2440 aa10.56□□□□□ -0.72
PTPRE-204ENST00000455661 IGHV4-4A0A075B6R2 117 aa10.56□□□□□ -0.72
PTPRE-204ENST00000455661 TRAV26-1A0A087WT03 109 aa10.56□□□□□ -0.72
PTPRE-204ENST00000455661 IGHV7-4-1A0A0J9YVY3 117 aa10.56□□□□□ -0.72
PTPRE-204ENST00000455661 SPINK8P0C7L1 97 aa10.56□□□□□ -0.72
PTPRE-204ENST00000455661 SLC25A16P16260 332 aa10.56□□□□□ -0.72
PTPRE-204ENST00000455661 PSMB2P49721 201 aa10.56□□□□□ -0.72
PTPRE-204ENST00000455661 LCNL1Q6ZST4 164 aa10.56□□□□□ -0.72
PTPRE-204ENST00000455661 OR11H6Q8NGC7 330 aa10.56□□□□□ -0.72
PTPRE-204ENST00000455661 ZNF418Q8TF45 676 aaPredicted RBP10.56□□□□□ -0.72
PTPRE-204ENST00000455661 AGPAT4-IT1Q9H0P7 198 aa10.56□□□□□ -0.72
PTPRE-204ENST00000455661 IGHV3-35A0A0C4DH35 117 aa10.55□□□□□ -0.72
PTPRE-204ENST00000455661 SRSF9Q13242 221 aaKnown RBP eCLIP10.55□□□□□ -0.72
PTPRE-204ENST00000455661 SCGB1D4Q6XE38 83 aa10.55□□□□□ -0.72
PTPRE-204ENST00000455661 TOMM6Q96B49 74 aa10.55□□□□□ -0.72
PTPRE-204ENST00000455661 KLK15Q9H2R5 256 aa10.55□□□□□ -0.72
PTPRE-204ENST00000455661 LOC107984156A0A0G2JMH3 177 aa10.55□□□□□ -0.72
PTPRE-204ENST00000455661 LINC01549A6NIU2 74 aa10.55□□□□□ -0.72
PTPRE-204ENST00000455661 CRYBA4P53673 196 aa10.55□□□□□ -0.72
PTPRE-204ENST00000455661 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.55□□□□□ -0.72
PTPRE-204ENST00000455661 ARL17AQ8IVW1 177 aa10.55□□□□□ -0.72
PTPRE-204ENST00000455661 NEXN-AS1Q8NBZ9 246 aa10.55□□□□□ -0.72
PTPRE-204ENST00000455661 DEFB124Q8NES8 71 aa10.55□□□□□ -0.72
PTPRE-204ENST00000455661 ZNF815PA8K554 130 aa10.54□□□□□ -0.72
PTPRE-204ENST00000455661 BUB3O43684 328 aa10.54□□□□□ -0.72
PTPRE-204ENST00000455661 NDPQ00604 133 aa10.54□□□□□ -0.72
PTPRE-204ENST00000455661 PRADC1Q9BSG0 188 aa10.54□□□□□ -0.72
PTPRE-204ENST00000455661 VCX2Q9H322 139 aa10.54□□□□□ -0.72
PTPRE-204ENST00000455661 SH3BGRL2Q9UJC5 107 aa10.54□□□□□ -0.72
PTPRE-204ENST00000455661 SMCPP49901 116 aaPredicted RBP10.53□□□□□ -0.72
PTPRE-204ENST00000455661 LY6G5BQ8NDX9 201 aa10.53□□□□□ -0.72
PTPRE-204ENST00000455661 CDIP1Q9H305 208 aa10.53□□□□□ -0.72
PTPRE-204ENST00000455661 HIF1ANQ9NWT6 349 aa10.53□□□□□ -0.72
PTPRE-204ENST00000455661 PKDREJQ9NTG1 2253 aa10.53□□□□□ -0.72
PTPRE-204ENST00000455661 CFAP47Q6ZTR5 3102 aa10.52□□□□□ -0.72
PTPRE-204ENST00000455661 NFE4Q86UQ8 179 aa10.52□□□□□ -0.72
PTPRE-204ENST00000455661 VKORC1Q9BQB6 163 aa10.52□□□□□ -0.72
PTPRE-204ENST00000455661 CD3EP07766 207 aa10.52□□□□□ -0.73
PTPRE-204ENST00000455661 UBE2D1P51668 147 aa10.52□□□□□ -0.73
PTPRE-204ENST00000455661 SUMO2P61956 95 aaKnown RBP10.52□□□□□ -0.73
PTPRE-204ENST00000455661 PIP4P1Q86T03 277 aa10.52□□□□□ -0.73
PTPRE-204ENST00000455661 PPDPFLQ8WWR9 84 aa10.52□□□□□ -0.73
PTPRE-204ENST00000455661 MRPL53Q96EL3 112 aaKnown RBP10.52□□□□□ -0.73
PTPRE-204ENST00000455661 H3BVH4 76 aa10.51□□□□□ -0.73
PTPRE-204ENST00000455661 TSPAN13O95857 204 aa10.51□□□□□ -0.73
PTPRE-204ENST00000455661 SMG1Q96Q15 3661 aaKnown RBP10.51□□□□□ -0.73
PTPRE-204ENST00000455661 IGHV3-66A0A0C4DH42 116 aa10.51□□□□□ -0.73
PTPRE-204ENST00000455661 Q6ZUT4 128 aa10.51□□□□□ -0.73
PTPRE-204ENST00000455661 WFDC12Q8WWY7 111 aa10.51□□□□□ -0.73
PTPRE-204ENST00000455661 BAALCQ8WXS3 180 aa10.51□□□□□ -0.73
PTPRE-204ENST00000455661 ZFAND3Q9H8U3 227 aa10.51□□□□□ -0.73
PTPRE-204ENST00000455661 ZZEF1O43149 2961 aa10.51□□□□□ -0.73
PTPRE-204ENST00000455661 MT-ATP8P03928 68 aa10.5□□□□□ -0.73
PTPRE-204ENST00000455661 C15orf32Q32M92 178 aa10.5□□□□□ -0.73
PTPRE-204ENST00000455661 C2orf66Q6UXQ4 117 aa10.5□□□□□ -0.73
PTPRE-204ENST00000455661 C9orf47Q6ZRZ4 202 aa10.5□□□□□ -0.73
PTPRE-204ENST00000455661 PRSS29PA6NIE9 313 aa10.5□□□□□ -0.73
PTPRE-204ENST00000455661 ODF3BA8MYP8 253 aa10.5□□□□□ -0.73
PTPRE-204ENST00000455661 M0R1W7 72 aa10.5□□□□□ -0.73
PTPRE-204ENST00000455661 CLEC3BP05452 202 aa10.5□□□□□ -0.73
PTPRE-204ENST00000455661 UBE2D3P61077 147 aa10.5□□□□□ -0.73
PTPRE-204ENST00000455661 UBE2D2P62837 147 aa10.5□□□□□ -0.73
PTPRE-204ENST00000455661 SFTA2Q6UW10 78 aa10.5□□□□□ -0.73
PTPRE-204ENST00000455661 ZFP2Q6ZN57 461 aa10.5□□□□□ -0.73
PTPRE-204ENST00000455661 TEN1Q86WV5 123 aa10.5□□□□□ -0.73
PTPRE-204ENST00000455661 ZNF318Q5VUA4 2279 aa10.5□□□□□ -0.73
PTPRE-204ENST00000455661 RP1L1Q8IWN7 2480 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms