RNA–Protein interactions for RNA: ENST00000453553.1

USP25-206, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-206ENST00000453553 ARPINQ7Z6K5 226 aa1.88□□□□□ -2.11
USP25-206ENST00000453553 Q8TAT8 98 aa1.88□□□□□ -2.11
USP25-206ENST00000453553 CALML5Q9NZT1 146 aa1.88□□□□□ -2.11
USP25-206ENST00000453553 SOX21Q9Y651 276 aaPredicted RBP1.88□□□□□ -2.11
USP25-206ENST00000453553 CFAP74Q9C0B2 1584 aa1.88□□□□□ -2.11
USP25-206ENST00000453553 ABCA3Q99758 1704 aa1.88□□□□□ -2.11
USP25-206ENST00000453553 CFAP47Q6ZTR5 3102 aa1.88□□□□□ -2.11
USP25-206ENST00000453553 MYO5AQ9Y4I1 1855 aaKnown RBP1.88□□□□□ -2.11
USP25-206ENST00000453553 CHD6Q8TD26 2715 aa1.88□□□□□ -2.11
USP25-206ENST00000453553 KMT2BQ9UMN6 2715 aaPredicted RBP1.88□□□□□ -2.11
USP25-206ENST00000453553 A2ML1A8K2U0 1454 aa1.88□□□□□ -2.11
USP25-206ENST00000453553 DIDO1Q9BTC0 2240 aaKnown RBP1.87□□□□□ -2.11
USP25-206ENST00000453553 FASNP49327 2511 aaKnown RBP1.87□□□□□ -2.11
USP25-206ENST00000453553 MED23Q9ULK4 1368 aa1.87□□□□□ -2.11
USP25-206ENST00000453553 ABCC1P33527 1531 aa1.87□□□□□ -2.11
USP25-206ENST00000453553 ERICH3Q5RHP9 1530 aa1.87□□□□□ -2.11
USP25-206ENST00000453553 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.87□□□□□ -2.11
USP25-206ENST00000453553 HIST1H1AQ02539 215 aaPredicted RBP1.87□□□□□ -2.11
USP25-206ENST00000453553 TIAM1Q13009 1591 aa1.87□□□□□ -2.11
USP25-206ENST00000453553 OR4C6Q8NH72 309 aa1.87□□□□□ -2.11
USP25-206ENST00000453553 CCL4L1Q8NHW4 92 aa1.87□□□□□ -2.11
USP25-206ENST00000453553 C4orf3Q8WVX3 66 aa1.87□□□□□ -2.11
USP25-206ENST00000453553 CLEC2BQ92478 149 aa1.87□□□□□ -2.11
USP25-206ENST00000453553 BRWD1Q9NSI6 2320 aa1.87□□□□□ -2.11
USP25-206ENST00000453553 DSPPQ9NZW4 1301 aa1.87□□□□□ -2.11
USP25-206ENST00000453553 CFAP54Q96N23 3096 aa1.87□□□□□ -2.11
USP25-206ENST00000453553 FREM1Q5H8C1 2179 aa1.86□□□□□ -2.11
USP25-206ENST00000453553 ZDBF2Q9HCK1 2354 aa1.86□□□□□ -2.11
USP25-206ENST00000453553 USP9XQ93008 2570 aaPredicted RBP1.86□□□□□ -2.11
USP25-206ENST00000453553 DISP2A7MBM2 1401 aa1.86□□□□□ -2.11
USP25-206ENST00000453553 CNTLNQ9NXG0 1405 aa1.86□□□□□ -2.11
USP25-206ENST00000453553 ZNF736B4DX44 427 aaPredicted RBP1.86□□□□□ -2.11
USP25-206ENST00000453553 TCRAP04437 139 aa1.86□□□□□ -2.11
USP25-206ENST00000453553 SLC25A5P05141 298 aaKnown RBP1.86□□□□□ -2.11
USP25-206ENST00000453553 CXCL8P10145 99 aa1.86□□□□□ -2.11
USP25-206ENST00000453553 DEFB115Q30KQ5 88 aa1.86□□□□□ -2.11
USP25-206ENST00000453553 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.86□□□□□ -2.11
USP25-206ENST00000453553 ZNF833PQ6ZTB9 187 aa1.86□□□□□ -2.11
USP25-206ENST00000453553 ZNF563Q8TA94 476 aa1.86□□□□□ -2.11
USP25-206ENST00000453553 TCEAL4Q96EI5 215 aa1.86□□□□□ -2.11
USP25-206ENST00000453553 NAA38Q9BRA0 125 aaKnown RBP1.86□□□□□ -2.11
USP25-206ENST00000453553 COPZ2Q9P299 210 aa1.86□□□□□ -2.11
USP25-206ENST00000453553 KLK9Q9UKQ9 250 aa1.86□□□□□ -2.11
USP25-206ENST00000453553 TRPM1Q7Z4N2 1603 aa1.86□□□□□ -2.11
USP25-206ENST00000453553 USP32Q8NFA0 1604 aa1.86□□□□□ -2.11
USP25-206ENST00000453553 NUP210Q8TEM1 1887 aaPredicted RBP1.86□□□□□ -2.11
USP25-206ENST00000453553 TOP2AP11388 1531 aaKnown RBP1.86□□□□□ -2.11
USP25-206ENST00000453553 MUC6Q6W4X9 2439 aa1.86□□□□□ -2.11
USP25-206ENST00000453553 FLNBO75369 2602 aaKnown RBP1.86□□□□□ -2.11
USP25-206ENST00000453553 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.86□□□□□ -2.11
USP25-206ENST00000453553 DIP2CQ9Y2E4 1556 aa1.85□□□□□ -2.11
USP25-206ENST00000453553 KIAA1107Q9UPP5 1409 aa1.85□□□□□ -2.11
USP25-206ENST00000453553 EPG5Q9HCE0 2579 aa1.85□□□□□ -2.11
USP25-206ENST00000453553 ABCA6Q8N139 1617 aa1.85□□□□□ -2.11
USP25-206ENST00000453553 CICQ96RK0 1608 aaPredicted RBP1.85□□□□□ -2.11
USP25-206ENST00000453553 C9orf170A2RU37 121 aa1.85□□□□□ -2.11
USP25-206ENST00000453553 UQCRQO14949 82 aa1.85□□□□□ -2.11
USP25-206ENST00000453553 CCL16O15467 120 aa1.85□□□□□ -2.11
USP25-206ENST00000453553 MRPS14O60783 128 aaKnown RBP1.85□□□□□ -2.11
USP25-206ENST00000453553 TRACP01848 142 aa1.85□□□□□ -2.11
USP25-206ENST00000453553 HBDP02042 147 aa1.85□□□□□ -2.11
USP25-206ENST00000453553 MPC1LP0DKB6 136 aa1.85□□□□□ -2.11
USP25-206ENST00000453553 SLC25A4P12235 298 aa1.85□□□□□ -2.11
USP25-206ENST00000453553 BLCAPP62952 87 aa1.85□□□□□ -2.11
USP25-206ENST00000453553 CCDC58Q4VC31 144 aa1.85□□□□□ -2.11
USP25-206ENST00000453553 HSD17B12Q53GQ0 312 aa1.85□□□□□ -2.11
USP25-206ENST00000453553 GBF1Q92538 1859 aa1.85□□□□□ -2.11
USP25-206ENST00000453553 COL24A1Q17RW2 1714 aa1.85□□□□□ -2.11
USP25-206ENST00000453553 ATP7AQ04656 1500 aa1.85□□□□□ -2.11
USP25-206ENST00000453553 C5orf42Q9H799 3197 aa1.85□□□□□ -2.11
USP25-206ENST00000453553 SBF2Q86WG5 1849 aa1.84□□□□□ -2.11
USP25-206ENST00000453553 DMDP11532 3685 aa1.84□□□□□ -2.11
USP25-206ENST00000453553 PIK3C2AO00443 1686 aa1.84□□□□□ -2.11
USP25-206ENST00000453553 ANAPC1Q9H1A4 1944 aa1.84□□□□□ -2.11
USP25-206ENST00000453553 CCDC88BA6NC98 1476 aa1.84□□□□□ -2.11
USP25-206ENST00000453553 COX4I1P13073 169 aa1.84□□□□□ -2.11
USP25-206ENST00000453553 LSM3P62310 102 aaKnown RBP1.84□□□□□ -2.11
USP25-206ENST00000453553 DIAPH2-AS1Q14236 149 aa1.84□□□□□ -2.11
USP25-206ENST00000453553 GKN2Q86XP6 184 aa1.84□□□□□ -2.11
USP25-206ENST00000453553 OR5AS1Q8N127 324 aa1.84□□□□□ -2.11
USP25-206ENST00000453553 OR4S1Q8NGB4 309 aa1.84□□□□□ -2.11
USP25-206ENST00000453553 OR8J3Q8NGG0 315 aa1.84□□□□□ -2.11
USP25-206ENST00000453553 OR5AK2Q8NH90 309 aa1.84□□□□□ -2.11
USP25-206ENST00000453553 PSMF1Q92530 271 aa1.84□□□□□ -2.11
USP25-206ENST00000453553 NABP2Q9BQ15 211 aa1.84□□□□□ -2.11
USP25-206ENST00000453553 SMIM3Q9BZL3 60 aa1.84□□□□□ -2.11
USP25-206ENST00000453553 ABCC3O15438 1527 aa1.84□□□□□ -2.11
USP25-206ENST00000453553 WDFY4Q6ZS81 3184 aa1.84□□□□□ -2.12
USP25-206ENST00000453553 ADGRB2O60241 1585 aa1.84□□□□□ -2.12
USP25-206ENST00000453553 MAST1Q9Y2H9 1570 aa1.84□□□□□ -2.12
USP25-206ENST00000453553 TMEM131LA2VDJ0 1609 aa1.84□□□□□ -2.12
USP25-206ENST00000453553 CPDO75976 1380 aa1.84□□□□□ -2.12
USP25-206ENST00000453553 TET3O43151 1660 aa1.83□□□□□ -2.12
USP25-206ENST00000453553 COL4A5P29400 1685 aa1.83□□□□□ -2.12
USP25-206ENST00000453553 TNS3Q68CZ2 1445 aa1.83□□□□□ -2.12
USP25-206ENST00000453553 ZNF292O60281 2723 aa1.83□□□□□ -2.12
USP25-206ENST00000453553 DCHS1Q96JQ0 3298 aa1.83□□□□□ -2.12
USP25-206ENST00000453553 MYH10P35580 1976 aa1.83□□□□□ -2.12
USP25-206ENST00000453553 RGPD3A6NKT7 1758 aaPredicted RBP1.83□□□□□ -2.12
USP25-206ENST00000453553 RGPD4Q7Z3J3 1758 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms