RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 TMED6Q8WW62 240 aa8.94□□□□□ -0.98
PRPF40A-203ENST00000448428 CYTL1Q9NRR1 136 aa8.94□□□□□ -0.98
PRPF40A-203ENST00000448428 KLF12Q9Y4X4 402 aa8.94□□□□□ -0.98
PRPF40A-203ENST00000448428 LENEPQ9Y5L5 61 aa8.94□□□□□ -0.98
PRPF40A-203ENST00000448428 NACAE9PAV3 2078 aa8.93□□□□□ -0.98
PRPF40A-203ENST00000448428 TRAV8-1A0A0A6YYK1 113 aa8.93□□□□□ -0.98
PRPF40A-203ENST00000448428 TAAR5O14804 337 aa8.93□□□□□ -0.98
PRPF40A-203ENST00000448428 CXorf1O96002 111 aa8.93□□□□□ -0.98
PRPF40A-203ENST00000448428 GNG5P63218 68 aa8.93□□□□□ -0.98
PRPF40A-203ENST00000448428 ZNF726P1Q15940 193 aa8.93□□□□□ -0.98
PRPF40A-203ENST00000448428 UBE2DNLQ8IWF7 75 aa8.93□□□□□ -0.98
PRPF40A-203ENST00000448428 ST6GAL2Q96JF0 529 aa8.93□□□□□ -0.98
PRPF40A-203ENST00000448428 HOXA5P20719 270 aa8.92□□□□□ -0.98
PRPF40A-203ENST00000448428 TCL1AP56279 114 aa8.92□□□□□ -0.98
PRPF40A-203ENST00000448428 SUMO1P63165 101 aaKnown RBP8.92□□□□□ -0.98
PRPF40A-203ENST00000448428 OR5I1Q13606 314 aa8.92□□□□□ -0.98
PRPF40A-203ENST00000448428 RNF212Q495C1 297 aa8.92□□□□□ -0.98
PRPF40A-203ENST00000448428 MUC21Q5SSG8 566 aa8.92□□□□□ -0.98
PRPF40A-203ENST00000448428 IBA57Q5T440 356 aaKnown RBP8.92□□□□□ -0.98
PRPF40A-203ENST00000448428 Q6AWC8 147 aa8.92□□□□□ -0.98
PRPF40A-203ENST00000448428 TVP23CQ96ET8 276 aa8.92□□□□□ -0.98
PRPF40A-203ENST00000448428 TRGV1A0A0A0MS02 117 aa8.91□□□□□ -0.98
PRPF40A-203ENST00000448428 SPINK4O60575 86 aa8.91□□□□□ -0.98
PRPF40A-203ENST00000448428 NUDT3O95989 172 aa8.91□□□□□ -0.98
PRPF40A-203ENST00000448428 C5orf17Q8NAS9 161 aa8.91□□□□□ -0.98
PRPF40A-203ENST00000448428 OR11H4Q8NGC9 324 aa8.91□□□□□ -0.98
PRPF40A-203ENST00000448428 SGK494Q96LW2 274 aa8.91□□□□□ -0.98
PRPF40A-203ENST00000448428 TMPRSS5Q9H3S3 457 aa8.91□□□□□ -0.98
PRPF40A-203ENST00000448428 TMEM167BQ9NRX6 74 aa8.91□□□□□ -0.98
PRPF40A-203ENST00000448428 TRGV2A0A075B6R0 118 aa8.9□□□□□ -0.98
PRPF40A-203ENST00000448428 TRAV26-1A0A087WT03 109 aa8.9□□□□□ -0.98
PRPF40A-203ENST00000448428 CTXND1A0A1B0GTU2 59 aa8.9□□□□□ -0.98
PRPF40A-203ENST00000448428 M0R2N4 97 aa8.9□□□□□ -0.98
PRPF40A-203ENST00000448428 TCRAP04437 139 aa8.9□□□□□ -0.98
PRPF40A-203ENST00000448428 IQCF2Q8IXL9 164 aa8.9□□□□□ -0.98
PRPF40A-203ENST00000448428 KCNRGQ8N5I3 272 aa8.9□□□□□ -0.98
PRPF40A-203ENST00000448428 C18orf15Q96N68 181 aa8.9□□□□□ -0.98
PRPF40A-203ENST00000448428 ARPC5LQ9BPX5 153 aa8.9□□□□□ -0.98
PRPF40A-203ENST00000448428 TREM1Q9NP99 234 aa8.9□□□□□ -0.98
PRPF40A-203ENST00000448428 MDFICQ9P1T7 246 aa8.9□□□□□ -0.98
PRPF40A-203ENST00000448428 EPDR1Q9UM22 224 aa8.9□□□□□ -0.98
PRPF40A-203ENST00000448428 VPS13DQ5THJ4 4388 aa8.89□□□□□ -0.99
PRPF40A-203ENST00000448428 SERTM2A0A1B0GWG4 89 aa8.89□□□□□ -0.99
PRPF40A-203ENST00000448428 HMSDA8MTL9 139 aa8.89□□□□□ -0.99
PRPF40A-203ENST00000448428 GGTLC3B5MD39 225 aa8.89□□□□□ -0.99
PRPF40A-203ENST00000448428 ZNF345Q14585 488 aa8.89□□□□□ -0.99
PRPF40A-203ENST00000448428 LGALS9BQ3B8N2 356 aa8.89□□□□□ -0.99
PRPF40A-203ENST00000448428 AKR1C8PQ5T2L2 129 aa8.89□□□□□ -0.99
PRPF40A-203ENST00000448428 FAM159AQ6UWV7 190 aa8.89□□□□□ -0.99
PRPF40A-203ENST00000448428 ATG101Q9BSB4 218 aa8.89□□□□□ -0.99
PRPF40A-203ENST00000448428 IGLV2-18A0A075B6J9 118 aa8.88□□□□□ -0.99
PRPF40A-203ENST00000448428 A0A0J9YY99 117 aa8.88□□□□□ -0.99
PRPF40A-203ENST00000448428 A0A1W2PRE2 83 aa8.88□□□□□ -0.99
PRPF40A-203ENST00000448428 F6UZH7 168 aa8.88□□□□□ -0.99
PRPF40A-203ENST00000448428 GNRH2O43555 120 aa8.88□□□□□ -0.99
PRPF40A-203ENST00000448428 IGLV2-11P01706 119 aa8.88□□□□□ -0.99
PRPF40A-203ENST00000448428 FGF8P55075 233 aaPredicted RBP8.88□□□□□ -0.99
PRPF40A-203ENST00000448428 ZNF415Q09FC8 603 aa8.88□□□□□ -0.99
PRPF40A-203ENST00000448428 TMEM183BQ1AE95 376 aa8.88□□□□□ -0.99
PRPF40A-203ENST00000448428 TMEM183AQ8IXX5 376 aa8.88□□□□□ -0.99
PRPF40A-203ENST00000448428 MRPL16Q9NX20 251 aaKnown RBP8.88□□□□□ -0.99
PRPF40A-203ENST00000448428 NAGKQ9UJ70 344 aa8.88□□□□□ -0.99
PRPF40A-203ENST00000448428 MUC4Q99102 2169 aa8.88□□□□□ -0.99
PRPF40A-203ENST00000448428 EPPK1P58107 5090 aaKnown RBP8.87□□□□□ -0.99
PRPF40A-203ENST00000448428 TRAV21A0A0B4J279 112 aa8.87□□□□□ -0.99
PRPF40A-203ENST00000448428 A0A0D9SG52 128 aa8.87□□□□□ -0.99
PRPF40A-203ENST00000448428 H3BNG1 76 aa8.87□□□□□ -0.99
PRPF40A-203ENST00000448428 K7EQM0 130 aa8.87□□□□□ -0.99
PRPF40A-203ENST00000448428 FAM3BP58499 235 aaPredicted RBP8.87□□□□□ -0.99
PRPF40A-203ENST00000448428 UBE2G2P60604 165 aa8.87□□□□□ -0.99
PRPF40A-203ENST00000448428 FLI1Q01543 452 aaPredicted RBP8.87□□□□□ -0.99
PRPF40A-203ENST00000448428 TDRG1Q3Y452 100 aa8.87□□□□□ -0.99
PRPF40A-203ENST00000448428 Q6ZR54 194 aa8.87□□□□□ -0.99
PRPF40A-203ENST00000448428 VSIG2Q96IQ7 327 aa8.87□□□□□ -0.99
PRPF40A-203ENST00000448428 C8orf49Q96NF6 230 aa8.87□□□□□ -0.99
PRPF40A-203ENST00000448428 PSG8Q9UQ74 426 aa8.87□□□□□ -0.99
PRPF40A-203ENST00000448428 TRGV11A0A075B6L2 103 aa8.86□□□□□ -0.99
PRPF40A-203ENST00000448428 IGHV3-53P01767 116 aa8.86□□□□□ -0.99
PRPF40A-203ENST00000448428 FHITP49789 147 aa8.86□□□□□ -0.99
PRPF40A-203ENST00000448428 ZNF80P51504 273 aaPredicted RBP8.86□□□□□ -0.99
PRPF40A-203ENST00000448428 CCL18P55774 89 aa8.86□□□□□ -0.99
PRPF40A-203ENST00000448428 PRNTQ86SH4 94 aa8.86□□□□□ -0.99
PRPF40A-203ENST00000448428 CYB561D1Q8N8Q1 229 aa8.86□□□□□ -0.99
PRPF40A-203ENST00000448428 LINC00479Q96M42 142 aa8.86□□□□□ -0.99
PRPF40A-203ENST00000448428 SPXQ9BT56 116 aa8.86□□□□□ -0.99
PRPF40A-203ENST00000448428 NDFIP1Q9BT67 221 aa8.86□□□□□ -0.99
PRPF40A-203ENST00000448428 LINC00588Q9Y4M8 146 aa8.86□□□□□ -0.99
PRPF40A-203ENST00000448428 TRAV34A0A0B4J273 112 aa8.85□□□□□ -0.99
PRPF40A-203ENST00000448428 IGHV3-16A0A0C4DH30 117 aa8.85□□□□□ -0.99
PRPF40A-203ENST00000448428 MAP1LC3B2A6NCE7 125 aa8.85□□□□□ -0.99
PRPF40A-203ENST00000448428 FAM74A7A6NL05 159 aa8.85□□□□□ -0.99
PRPF40A-203ENST00000448428 IFNA7P01567 189 aa8.85□□□□□ -0.99
PRPF40A-203ENST00000448428 SEC11BP0C7V7 166 aa8.85□□□□□ -0.99
PRPF40A-203ENST00000448428 TMEM75Q8N9X5 138 aa8.85□□□□□ -0.99
PRPF40A-203ENST00000448428 MAP1LC3BQ9GZQ8 125 aa8.85□□□□□ -0.99
PRPF40A-203ENST00000448428 C11orf21Q9P2W6 132 aa8.85□□□□□ -0.99
PRPF40A-203ENST00000448428 KANTRA0A1W2PQU2 76 aa8.84□□□□□ -0.99
PRPF40A-203ENST00000448428 FBLL1A6NHQ2 334 aaKnown RBP8.84□□□□□ -0.99
PRPF40A-203ENST00000448428 RTL8CO15255 209 aa8.84□□□□□ -0.99
PRPF40A-203ENST00000448428 BCL2L11O43521 198 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms