RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 IGHV3OR16-13A0A075B7E8 117 aa12.71□□□□□ -0.37
SEMA3B-207ENST00000441915 IGHV3-74A0A0B4J1X5 117 aa12.71□□□□□ -0.37
SEMA3B-207ENST00000441915 SIVA1O15304 175 aa12.71□□□□□ -0.37
SEMA3B-207ENST00000441915 LEPP41159 167 aa12.71□□□□□ -0.37
SEMA3B-207ENST00000441915 EEF1AKMT3Q96AZ1 226 aa12.71□□□□□ -0.37
SEMA3B-207ENST00000441915 AJUBAQ96IF1 538 aa12.71□□□□□ -0.37
SEMA3B-207ENST00000441915 AP1S3Q96PC3 154 aa12.71□□□□□ -0.37
SEMA3B-207ENST00000441915 IGF2RP11717 2491 aa12.71□□□□□ -0.37
SEMA3B-207ENST00000441915 A0A1W2PPR1 153 aa12.71□□□□□ -0.38
SEMA3B-207ENST00000441915 A6NDN8 102 aa12.71□□□□□ -0.38
SEMA3B-207ENST00000441915 LINC01546A6NGU7 62 aa12.71□□□□□ -0.38
SEMA3B-207ENST00000441915 GAS8-AS1O95177 125 aa12.71□□□□□ -0.38
SEMA3B-207ENST00000441915 NMUP48645 174 aa12.71□□□□□ -0.38
SEMA3B-207ENST00000441915 TMEM78Q5T7P6 136 aa12.71□□□□□ -0.38
SEMA3B-207ENST00000441915 METTL26Q96S19 204 aa12.71□□□□□ -0.38
SEMA3B-207ENST00000441915 AGPAT4-IT1Q9H0P7 198 aa12.71□□□□□ -0.38
SEMA3B-207ENST00000441915 DKK2Q9UBU2 259 aa12.71□□□□□ -0.38
SEMA3B-207ENST00000441915 RAXQ9Y2V3 346 aa12.71□□□□□ -0.38
SEMA3B-207ENST00000441915 IGKV3D-20A0A0C4DH25 116 aa12.7□□□□□ -0.38
SEMA3B-207ENST00000441915 FCER1GP30273 86 aa12.7□□□□□ -0.38
SEMA3B-207ENST00000441915 UQCRFS1P47985 274 aa12.7□□□□□ -0.38
SEMA3B-207ENST00000441915 COL25A1Q9BXS0 654 aaPredicted RBP12.7□□□□□ -0.38
SEMA3B-207ENST00000441915 EVI2AP22794 236 aa12.7□□□□□ -0.38
SEMA3B-207ENST00000441915 HSD52Q0P140 79 aa12.7□□□□□ -0.38
SEMA3B-207ENST00000441915 COL6A6A6NMZ7 2263 aa12.69□□□□□ -0.38
SEMA3B-207ENST00000441915 TRBV7-1A0A0A6YYK4 115 aa12.69□□□□□ -0.38
SEMA3B-207ENST00000441915 C9orf118A6NHY6 69 aa12.69□□□□□ -0.38
SEMA3B-207ENST00000441915 LINC01548A6NM66 108 aa12.69□□□□□ -0.38
SEMA3B-207ENST00000441915 K7EP34 96 aa12.69□□□□□ -0.38
SEMA3B-207ENST00000441915 SCGB1A1P11684 91 aa12.69□□□□□ -0.38
SEMA3B-207ENST00000441915 OR4X2Q8NGF9 303 aa12.69□□□□□ -0.38
SEMA3B-207ENST00000441915 IGHV3-49A0A0A0MS15 119 aa12.68□□□□□ -0.38
SEMA3B-207ENST00000441915 CENPVL3A0A0U1RRI6 287 aa12.68□□□□□ -0.38
SEMA3B-207ENST00000441915 PCP2Q8IVA1 136 aa12.68□□□□□ -0.38
SEMA3B-207ENST00000441915 SMPXQ9UHP9 88 aa12.68□□□□□ -0.38
SEMA3B-207ENST00000441915 SELENOKQ9Y6D0 94 aa12.68□□□□□ -0.38
SEMA3B-207ENST00000441915 PRSS1P07477 247 aa12.68□□□□□ -0.38
SEMA3B-207ENST00000441915 PSMG4Q5JS54 123 aa12.68□□□□□ -0.38
SEMA3B-207ENST00000441915 C8orf86Q6ZUL3 223 aa12.68□□□□□ -0.38
SEMA3B-207ENST00000441915 MRPL53Q96EL3 112 aaKnown RBP12.68□□□□□ -0.38
SEMA3B-207ENST00000441915 UBTD1Q9HAC8 227 aa12.68□□□□□ -0.38
SEMA3B-207ENST00000441915 TRAV8-2A0A0B4J237 113 aa12.68□□□□□ -0.38
SEMA3B-207ENST00000441915 H3BRM9 83 aa12.68□□□□□ -0.38
SEMA3B-207ENST00000441915 ZNF207O43670 478 aaKnown RBP12.68□□□□□ -0.38
SEMA3B-207ENST00000441915 GATA1P15976 413 aaPredicted RBP12.68□□□□□ -0.38
SEMA3B-207ENST00000441915 EFNA4P52798 201 aa12.68□□□□□ -0.38
SEMA3B-207ENST00000441915 Q5PR19 223 aa12.68□□□□□ -0.38
SEMA3B-207ENST00000441915 JMJD8Q96S16 334 aa12.68□□□□□ -0.38
SEMA3B-207ENST00000441915 HIF1ANQ9NWT6 349 aa12.68□□□□□ -0.38
SEMA3B-207ENST00000441915 C11orf21Q9P2W6 132 aa12.68□□□□□ -0.38
SEMA3B-207ENST00000441915 SMIM17P0DL12 118 aa12.67□□□□□ -0.38
SEMA3B-207ENST00000441915 ADAMTSL5Q6ZMM2 481 aa12.67□□□□□ -0.38
SEMA3B-207ENST00000441915 PIFOQ8TCI5 191 aa12.67□□□□□ -0.38
SEMA3B-207ENST00000441915 ODF1Q14990 250 aa12.67□□□□□ -0.38
SEMA3B-207ENST00000441915 BPESC1Q9GZL8 116 aa12.67□□□□□ -0.38
SEMA3B-207ENST00000441915 H3BUT2 72 aa12.66□□□□□ -0.38
SEMA3B-207ENST00000441915 Q8N8P6 123 aa12.66□□□□□ -0.38
SEMA3B-207ENST00000441915 OR2K2Q8NGT1 345 aa12.66□□□□□ -0.38
SEMA3B-207ENST00000441915 A0A1B0GV72 72 aa12.66□□□□□ -0.38
SEMA3B-207ENST00000441915 NPFFO15130 113 aa12.66□□□□□ -0.38
SEMA3B-207ENST00000441915 ATP5G2Q06055 141 aa12.66□□□□□ -0.38
SEMA3B-207ENST00000441915 C9orf47Q6ZRZ4 202 aa12.66□□□□□ -0.38
SEMA3B-207ENST00000441915 TMEM158Q8WZ71 300 aa12.66□□□□□ -0.38
SEMA3B-207ENST00000441915 TRGV3P03979 118 aa12.65□□□□□ -0.38
SEMA3B-207ENST00000441915 LMO4P61968 165 aa12.65□□□□□ -0.38
SEMA3B-207ENST00000441915 C5orf56Q8N8D9 126 aa12.65□□□□□ -0.38
SEMA3B-207ENST00000441915 ZFHX3Q15911 3703 aa12.65□□□□□ -0.38
SEMA3B-207ENST00000441915 IGHV7-4-1A0A0J9YVY3 117 aa12.65□□□□□ -0.38
SEMA3B-207ENST00000441915 AZU1P20160 251 aa12.65□□□□□ -0.38
SEMA3B-207ENST00000441915 KIR3DS1Q14943 382 aa12.65□□□□□ -0.38
SEMA3B-207ENST00000441915 ZMAT4Q9H898 229 aa12.65□□□□□ -0.38
SEMA3B-207ENST00000441915 C16orf92Q96LL3 132 aa12.64□□□□□ -0.39
SEMA3B-207ENST00000441915 HHLA3Q9XRX5 114 aa12.64□□□□□ -0.39
SEMA3B-207ENST00000441915 UFC1Q9Y3C8 167 aa12.64□□□□□ -0.39
SEMA3B-207ENST00000441915 U3KQE9 123 aa12.64□□□□□ -0.39
SEMA3B-207ENST00000441915 IGKCP01834 107 aa12.64□□□□□ -0.39
SEMA3B-207ENST00000441915 SPANXN1Q5VSR9 72 aa12.64□□□□□ -0.39
SEMA3B-207ENST00000441915 OR5A1Q8NGJ0 315 aa12.64□□□□□ -0.39
SEMA3B-207ENST00000441915 IGLV2-18A0A075B6J9 118 aa12.63□□□□□ -0.39
SEMA3B-207ENST00000441915 ATP5LO75964 103 aa12.63□□□□□ -0.39
SEMA3B-207ENST00000441915 FOXC2Q99958 501 aa12.63□□□□□ -0.39
SEMA3B-207ENST00000441915 A0A0G2JLM5 398 aa12.63□□□□□ -0.39
SEMA3B-207ENST00000441915 WFDC12Q8WWY7 111 aa12.63□□□□□ -0.39
SEMA3B-207ENST00000441915 SIGMAR1Q99720 223 aa12.63□□□□□ -0.39
SEMA3B-207ENST00000441915 TMEM219Q86XT9 240 aa12.62□□□□□ -0.39
SEMA3B-207ENST00000441915 ATP6V0BQ99437 205 aa12.62□□□□□ -0.39
SEMA3B-207ENST00000441915 NAA38Q9BRA0 125 aaKnown RBP12.62□□□□□ -0.39
SEMA3B-207ENST00000441915 GTSF1LQ9H1H1 148 aa12.62□□□□□ -0.39
SEMA3B-207ENST00000441915 HIVEP3Q5T1R4 2406 aa12.62□□□□□ -0.39
SEMA3B-207ENST00000441915 AKAP6Q13023 2319 aa12.62□□□□□ -0.39
SEMA3B-207ENST00000441915 TRAV41A0A0B4J266 112 aa12.61□□□□□ -0.39
SEMA3B-207ENST00000441915 LAGE3Q14657 143 aa12.61□□□□□ -0.39
SEMA3B-207ENST00000441915 MYOZ3Q8TDC0 251 aa12.61□□□□□ -0.39
SEMA3B-207ENST00000441915 IGHV4-4A0A075B6R2 117 aa12.61□□□□□ -0.39
SEMA3B-207ENST00000441915 IGKV2D-26A0A0A0MRZ7 120 aa12.61□□□□□ -0.39
SEMA3B-207ENST00000441915 TRAV26-2A0A0B4J265 109 aa12.61□□□□□ -0.39
SEMA3B-207ENST00000441915 FAM223BA6NKX1 122 aa12.61□□□□□ -0.39
SEMA3B-207ENST00000441915 DPM2O94777 84 aa12.61□□□□□ -0.39
SEMA3B-207ENST00000441915 SMAGPQ0VAQ4 97 aa12.61□□□□□ -0.39
SEMA3B-207ENST00000441915 C9orf139Q6ZV77 190 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms