RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 MKXQ8IYA7 352 aa4.43□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 C6orf223Q8N319 242 aa4.43□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 ZNF491Q8N8L2 437 aa4.43□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 OTOSQ8NHW6 89 aa4.43□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 LINC00526Q96FQ7 95 aa4.43□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 PRELID3AQ96N28 172 aa4.43□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 PRO0461Q9UI25 63 aa4.43□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 HILPDAQ9Y5L2 63 aa4.43□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 A0A0C4DFX4 3053 aa4.43□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 WDR87Q6ZQQ6 2873 aa4.43□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 ASCC3Q8N3C0 2202 aaKnown RBP4.43□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 ARID1BQ8NFD5 2236 aaPredicted RBP4.43□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 TRBV20-1A0A075B6N2 111 aa4.43□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 IGHV4-4A0A075B6R2 117 aa4.43□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 IGHV3-20A0A0C4DH32 117 aa4.43□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 C11orf94C9JXX5 98 aa4.43□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 H3BMG7 143 aa4.43□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 LGALS9O00182 355 aa4.43□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 APCSP02743 223 aa4.43□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 IGKV3-11P04433 115 aa4.43□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 ASAH2BP0C7U1 165 aa4.43□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 NPPCP23582 126 aa4.43□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 GNB1P62873 340 aa4.43□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 TWIST1Q15672 202 aa4.43□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 ZNF645Q8N7E2 425 aa4.43□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 WFDC11Q8NEX6 87 aa4.43□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 COPS9Q8WXC6 57 aa4.43□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 RPL36ALQ969Q0 106 aaKnown RBP4.43□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 CACNA1EQ15878 2313 aa4.43□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 PCNX3Q9H6A9 2034 aa4.42□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 COL5A1P20908 1838 aaPredicted RBP4.42□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 TRBV20OR9-2A0A075B6H5 130 aa4.42□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 C3orf85A0A1B0GTC6 90 aa4.42□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 A0A1W2PQD3 144 aa4.42□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 TCRAP04437 139 aa4.42□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 SLC25A5P05141 298 aaKnown RBP4.42□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 RPL18Q07020 188 aaKnown RBP4.42□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 NMSQ5H8A3 153 aa4.42□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 C11orf71Q6IPW1 123 aa4.42□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 LINC00311Q8N616 119 aa4.42□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 LINC00337Q8N6G1 96 aa4.42□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 C11orf52Q96A22 123 aa4.42□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 LYZL4Q96KX0 146 aa4.42□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 HIST1H4GQ99525 98 aa4.42□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 TNFRSF19Q9NS68 423 aa4.42□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 PI4KAP42356 2102 aa4.42□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 FER1L5A0AVI2 2057 aa4.42□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 KIF26BQ2KJY2 2108 aa4.42□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 TRAV41A0A0B4J266 112 aa4.42□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 IGHV1-69DA0A0B4J2H0 117 aa4.42□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 IGHV1-58A0A0C4DH39 117 aa4.42□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 SNCGO76070 127 aa4.42□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 DUSP14O95147 198 aaKnown RBP4.42□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 TRACP01848 142 aa4.42□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 LGALS3P17931 250 aaKnown RBP4.42□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 PCSK4Q6UW60 755 aa4.42□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 MARCH3Q86UD3 253 aa4.42□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 GTSCR1Q86UQ5 136 aa4.42□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 DRAM1Q8N682 238 aa4.42□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 RNF182Q8N6D2 247 aa4.42□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 ZNF525Q8N782 197 aa4.42□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 H1FXQ92522 213 aaKnown RBP4.42□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 NABP1Q96AH0 204 aa4.42□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 CCL13Q99616 98 aa4.42□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 ZNF71Q9NQZ8 489 aaPredicted RBP4.42□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 MED12LQ86YW9 2145 aa4.41□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 TRIOBPQ9H2D6 2365 aa4.41□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 KLLNB2CW77 178 aa4.41□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 LST1O00453 97 aa4.41□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 NXPH4O95158 308 aa4.41□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 IGHG1P01857 330 aa4.41□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 TAS2R45P59539 299 aa4.41□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 RBMY1FQ15415 496 aaKnown RBP4.41□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 NOTCH2NLQ7Z3S9 236 aa4.41□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 PRNTQ86SH4 94 aa4.41□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 RPP25LQ8N5L8 163 aaKnown RBP4.41□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 PPDPFLQ8WWR9 84 aa4.41□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 CHCHD1Q96BP2 118 aaKnown RBP4.41□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 ARHGAP5-AS1Q96IT6 56 aa4.41□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 PRAC1Q96KF2 57 aa4.41□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 AGPAT4-IT1Q9H0P7 198 aa4.41□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 FREM3P0C091 2139 aa4.41□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 TRAV12-2A0A075B6T6 113 aa4.4□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 IGHV3OR16-13A0A075B7E8 117 aa4.4□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 LOC107986453A0A1B0GWG9 222 aa4.4□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 A8MUN3 132 aa4.4□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 OOSP1A8MZH6 123 aa4.4□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 C9JCJ5 164 aa4.4□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 COX7A2P2O60397 106 aa4.4□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 BGLAPP02818 100 aa4.4□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 LINC01545Q5VT33 79 aa4.4□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 ZNF524Q96C55 264 aa4.4□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 V9GYV3 84 aa4.4□□□□□ -1.7
ALMS1-IT1-201ENST00000441587 USP34Q70CQ2 3546 aa4.4□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 NCOA6Q14686 2063 aaPredicted RBP4.4□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 M0R2P5 195 aa4.4□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 LEPROTL1O95214 131 aa4.4□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 SCGB1C2P0DMR2 95 aa4.4□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 CRYGAP11844 174 aa4.4□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 CXCL5P42830 114 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms