RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 OR10X1Q8NGY0 326 aa13.15□□□□□ -0.31
PMS1-213ENST00000441310 MSRB1Q9NZV6 116 aa13.15□□□□□ -0.31
PMS1-213ENST00000441310 VSTM5A8MXK1 200 aa13.14□□□□□ -0.31
PMS1-213ENST00000441310 FCN3O75636 299 aa13.14□□□□□ -0.31
PMS1-213ENST00000441310 IL4P05112 153 aa13.14□□□□□ -0.31
PMS1-213ENST00000441310 TAL2Q16559 108 aa13.14□□□□□ -0.31
PMS1-213ENST00000441310 TMEM75Q8N9X5 138 aa13.14□□□□□ -0.31
PMS1-213ENST00000441310 TMEM167AQ8TBQ9 72 aa13.14□□□□□ -0.31
PMS1-213ENST00000441310 CARD19Q96LW7 228 aa13.14□□□□□ -0.31
PMS1-213ENST00000441310 E7EQL1 145 aa13.14□□□□□ -0.31
PMS1-213ENST00000441310 GATA1P15976 413 aaPredicted RBP13.14□□□□□ -0.31
PMS1-213ENST00000441310 PSMG4Q5JS54 123 aa13.14□□□□□ -0.31
PMS1-213ENST00000441310 TEX29Q8N6K0 151 aa13.14□□□□□ -0.31
PMS1-213ENST00000441310 ATP6V0E2Q8NHE4 81 aa13.14□□□□□ -0.31
PMS1-213ENST00000441310 ZFP2Q6ZN57 461 aa13.13□□□□□ -0.31
PMS1-213ENST00000441310 TMEM133Q9H2Q1 129 aa13.13□□□□□ -0.31
PMS1-213ENST00000441310 SH2D1AO60880 128 aa13.13□□□□□ -0.31
PMS1-213ENST00000441310 TGFAP01135 160 aa13.13□□□□□ -0.31
PMS1-213ENST00000441310 RPEQ96AT9 228 aa13.13□□□□□ -0.31
PMS1-213ENST00000441310 KIR2DL4Q99706 377 aa13.13□□□□□ -0.31
PMS1-213ENST00000441310 TRBV7-3A0A075B6L6 115 aa13.13□□□□□ -0.31
PMS1-213ENST00000441310 RNASE6Q93091 150 aaKnown RBP13.12□□□□□ -0.31
PMS1-213ENST00000441310 MSRB2Q9Y3D2 182 aa13.12□□□□□ -0.31
PMS1-213ENST00000441310 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.12□□□□□ -0.31
PMS1-213ENST00000441310 LINC01549A6NIU2 74 aa13.12□□□□□ -0.31
PMS1-213ENST00000441310 INS-IGF2F8WCM5 200 aa13.11□□□□□ -0.31
PMS1-213ENST00000441310 H3BVH4 76 aa13.11□□□□□ -0.31
PMS1-213ENST00000441310 CDSNQ15517 529 aa13.11□□□□□ -0.31
PMS1-213ENST00000441310 TMEM95Q3KNT9 176 aa13.11□□□□□ -0.31
PMS1-213ENST00000441310 PPDPFLQ8WWR9 84 aa13.11□□□□□ -0.31
PMS1-213ENST00000441310 NCBP2LA6PVI3 153 aaKnown RBP13.11□□□□□ -0.31
PMS1-213ENST00000441310 TRBV19A0A075B6N1 114 aa13.11□□□□□ -0.31
PMS1-213ENST00000441310 TRBV20-1A0A075B6N2 111 aa13.11□□□□□ -0.31
PMS1-213ENST00000441310 TNFRSF13BO14836 293 aaPredicted RBP13.11□□□□□ -0.31
PMS1-213ENST00000441310 ATP5LO75964 103 aa13.11□□□□□ -0.31
PMS1-213ENST00000441310 CRYGCP07315 174 aa13.11□□□□□ -0.31
PMS1-213ENST00000441310 OR4C13Q8NGP0 309 aa13.11□□□□□ -0.31
PMS1-213ENST00000441310 IGHV3-72A0A0B4J1Y9 119 aa13.1□□□□□ -0.31
PMS1-213ENST00000441310 TMEM178BH3BS89 294 aa13.1□□□□□ -0.31
PMS1-213ENST00000441310 CCL21O00585 134 aa13.1□□□□□ -0.31
PMS1-213ENST00000441310 TNFRSF6BO95407 300 aa13.1□□□□□ -0.31
PMS1-213ENST00000441310 ZNF833PQ6ZTB9 187 aa13.1□□□□□ -0.31
PMS1-213ENST00000441310 NGBQ9NPG2 151 aa13.1□□□□□ -0.31
PMS1-213ENST00000441310 CACNA1BQ00975 2339 aa13.1□□□□□ -0.31
PMS1-213ENST00000441310 ENSAO43768 121 aaKnown RBP13.1□□□□□ -0.31
PMS1-213ENST00000441310 TMEM200BQ69YZ2 307 aa13.1□□□□□ -0.31
PMS1-213ENST00000441310 TRBV6-1A0A0K0K1D8 114 aa13.09□□□□□ -0.31
PMS1-213ENST00000441310 LY6HO94772 140 aa13.09□□□□□ -0.31
PMS1-213ENST00000441310 NHLRC4P0CG21 123 aaPredicted RBP13.09□□□□□ -0.31
PMS1-213ENST00000441310 SIGLEC15Q6ZMC9 328 aa13.09□□□□□ -0.31
PMS1-213ENST00000441310 TEX36Q5VZQ5 186 aa13.09□□□□□ -0.31
PMS1-213ENST00000441310 CTSZQ9UBR2 303 aa13.09□□□□□ -0.31
PMS1-213ENST00000441310 TEN1Q86WV5 123 aa13.08□□□□□ -0.32
PMS1-213ENST00000441310 RNF185Q96GF1 192 aa13.08□□□□□ -0.32
PMS1-213ENST00000441310 VKORC1Q9BQB6 163 aa13.08□□□□□ -0.32
PMS1-213ENST00000441310 TMEM14CQ9P0S9 112 aa13.08□□□□□ -0.32
PMS1-213ENST00000441310 CCDC179H3BU77 68 aa13.08□□□□□ -0.32
PMS1-213ENST00000441310 EGR2P11161 476 aaPredicted RBP13.08□□□□□ -0.32
PMS1-213ENST00000441310 NXT2Q9NPJ8 142 aaKnown RBP13.07□□□□□ -0.32
PMS1-213ENST00000441310 MAP1AP78559 2803 aaPredicted RBP13.07□□□□□ -0.32
PMS1-213ENST00000441310 SPG11Q96JI7 2443 aa13.07□□□□□ -0.32
PMS1-213ENST00000441310 NDUFB3O43676 98 aa13.07□□□□□ -0.32
PMS1-213ENST00000441310 IGLV2-23P01705 113 aa13.07□□□□□ -0.32
PMS1-213ENST00000441310 HLA-DRB4P13762 266 aa13.07□□□□□ -0.32
PMS1-213ENST00000441310 RPL32P62910 135 aaKnown RBP13.07□□□□□ -0.32
PMS1-213ENST00000441310 MYOZ3Q8TDC0 251 aa13.07□□□□□ -0.32
PMS1-213ENST00000441310 HLA-DRB4X5D2U9 266 aa13.07□□□□□ -0.32
PMS1-213ENST00000441310 CD3EP07766 207 aa13.07□□□□□ -0.32
PMS1-213ENST00000441310 ZNF688P0C7X2 276 aa13.07□□□□□ -0.32
PMS1-213ENST00000441310 IGKV2-40A0A087WW87 121 aaPredicted RBP13.06□□□□□ -0.32
PMS1-213ENST00000441310 IGKV2D-40P01614 121 aaPredicted RBP13.06□□□□□ -0.32
PMS1-213ENST00000441310 EFNA4P52798 201 aa13.06□□□□□ -0.32
PMS1-213ENST00000441310 Q8TAT8 98 aa13.06□□□□□ -0.32
PMS1-213ENST00000441310 RASL11BQ9BPW5 248 aa13.06□□□□□ -0.32
PMS1-213ENST00000441310 FAM110AQ9BQ89 295 aa13.06□□□□□ -0.32
PMS1-213ENST00000441310 HRNRQ86YZ3 2850 aaPredicted RBP13.06□□□□□ -0.32
PMS1-213ENST00000441310 VMA21Q3ZAQ7 101 aa13.06□□□□□ -0.32
PMS1-213ENST00000441310 SVEP1Q4LDE5 3571 aa13.06□□□□□ -0.32
PMS1-213ENST00000441310 MYMXA0A1B0GTQ4 84 aa13.05□□□□□ -0.32
PMS1-213ENST00000441310 PRTN3P24158 256 aa13.05□□□□□ -0.32
PMS1-213ENST00000441310 PKD1L2Q7Z442 2459 aa13.05□□□□□ -0.32
PMS1-213ENST00000441310 RPL27AP46776 148 aaKnown RBP13.05□□□□□ -0.32
PMS1-213ENST00000441310 LY6DQ14210 128 aa13.05□□□□□ -0.32
PMS1-213ENST00000441310 ORM1P02763 201 aa13.04□□□□□ -0.32
PMS1-213ENST00000441310 AJUBAQ96IF1 538 aa13.04□□□□□ -0.32
PMS1-213ENST00000441310 CSMD1Q96PZ7 3565 aa13.04□□□□□ -0.32
PMS1-213ENST00000441310 ANKRD29Q8N6D5 301 aa13.04□□□□□ -0.32
PMS1-213ENST00000441310 GAGE12JA6NER3 117 aa13.03□□□□□ -0.32
PMS1-213ENST00000441310 GAGE7O76087 117 aa13.03□□□□□ -0.32
PMS1-213ENST00000441310 GAGE12FP0CL80 117 aa13.03□□□□□ -0.32
PMS1-213ENST00000441310 GAGE12GP0CL81 117 aa13.03□□□□□ -0.32
PMS1-213ENST00000441310 GAGE12IP0CL82 117 aa13.03□□□□□ -0.32
PMS1-213ENST00000441310 ZNF80P51504 273 aaPredicted RBP13.03□□□□□ -0.32
PMS1-213ENST00000441310 GAGE4Q13068 117 aa13.03□□□□□ -0.32
PMS1-213ENST00000441310 SRSF9Q13242 221 aaKnown RBP eCLIP13.03□□□□□ -0.32
PMS1-213ENST00000441310 ITPR1Q14643 2758 aa13.03□□□□□ -0.32
PMS1-213ENST00000441310 A0A087WX48 190 aa13.03□□□□□ -0.32
PMS1-213ENST00000441310 A8MWV9 139 aa13.03□□□□□ -0.32
PMS1-213ENST00000441310 CNTFRP26992 372 aa13.03□□□□□ -0.32
PMS1-213ENST00000441310 FBXL15Q9H469 300 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms