RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 TMEM75Q8N9X5 138 aa6.33□□□□□ -1.4
VTI1A-202ENST00000432306 OR4C13Q8NGP0 309 aa6.33□□□□□ -1.4
VTI1A-202ENST00000432306 BLNKQ8WV28 456 aa6.33□□□□□ -1.4
VTI1A-202ENST00000432306 AP1S3Q96PC3 154 aa6.33□□□□□ -1.4
VTI1A-202ENST00000432306 Q9H3A6 140 aa6.33□□□□□ -1.4
VTI1A-202ENST00000432306 AAMDCQ9H7C9 122 aa6.33□□□□□ -1.4
VTI1A-202ENST00000432306 LINC00312Q9Y6C7 94 aa6.33□□□□□ -1.4
VTI1A-202ENST00000432306 IGLV2-23P01705 113 aa6.33□□□□□ -1.4
VTI1A-202ENST00000432306 FABP6P51161 128 aa6.33□□□□□ -1.4
VTI1A-202ENST00000432306 MEF2CQ06413 473 aaPredicted RBP6.33□□□□□ -1.4
VTI1A-202ENST00000432306 TAL2Q16559 108 aa6.33□□□□□ -1.4
VTI1A-202ENST00000432306 GAFA1Q96PS6 74 aa6.33□□□□□ -1.4
VTI1A-202ENST00000432306 C19orf73Q9NVV2 129 aa6.33□□□□□ -1.4
VTI1A-202ENST00000432306 hADV38S2A0JD32 116 aa6.32□□□□□ -1.4
VTI1A-202ENST00000432306 E7EUB6 86 aa6.32□□□□□ -1.4
VTI1A-202ENST00000432306 H3BUT2 72 aa6.32□□□□□ -1.4
VTI1A-202ENST00000432306 NCR2O95944 276 aa6.32□□□□□ -1.4
VTI1A-202ENST00000432306 GLRXP35754 106 aa6.32□□□□□ -1.4
VTI1A-202ENST00000432306 MRGPRG-AS1Q2M3A8 158 aa6.32□□□□□ -1.4
VTI1A-202ENST00000432306 ASPHD1Q5U4P2 390 aa6.32□□□□□ -1.4
VTI1A-202ENST00000432306 FA2HQ7L5A8 372 aa6.32□□□□□ -1.4
VTI1A-202ENST00000432306 TMEM178AQ8NBL3 297 aa6.32□□□□□ -1.4
VTI1A-202ENST00000432306 MRPL36Q9P0J6 103 aaKnown RBP6.32□□□□□ -1.4
VTI1A-202ENST00000432306 RNF7Q9UBF6 113 aa6.32□□□□□ -1.4
VTI1A-202ENST00000432306 SLC25A15Q9Y619 301 aa6.32□□□□□ -1.4
VTI1A-202ENST00000432306 AKAP9Q99996 3911 aa6.32□□□□□ -1.4
VTI1A-202ENST00000432306 J3QLI3 93 aa6.31□□□□□ -1.4
VTI1A-202ENST00000432306 CNIH1O95406 144 aa6.31□□□□□ -1.4
VTI1A-202ENST00000432306 IGHV3-7P01780 117 aa6.31□□□□□ -1.4
VTI1A-202ENST00000432306 CD24P25063 80 aa6.31□□□□□ -1.4
VTI1A-202ENST00000432306 FAM27E3Q08E93 113 aa6.31□□□□□ -1.4
VTI1A-202ENST00000432306 ZNF415Q09FC8 603 aa6.31□□□□□ -1.4
VTI1A-202ENST00000432306 LEAP2Q969E1 77 aa6.31□□□□□ -1.4
VTI1A-202ENST00000432306 INSIG2Q9Y5U4 225 aa6.31□□□□□ -1.4
VTI1A-202ENST00000432306 SPCS1Q9Y6A9 102 aa6.31□□□□□ -1.4
VTI1A-202ENST00000432306 CSMD2Q7Z408 3487 aa6.31□□□□□ -1.4
VTI1A-202ENST00000432306 IGHV3OR15-7A0A075B7D8 119 aa6.3□□□□□ -1.4
VTI1A-202ENST00000432306 ATP5LO75964 103 aa6.3□□□□□ -1.4
VTI1A-202ENST00000432306 HBDP02042 147 aa6.3□□□□□ -1.4
VTI1A-202ENST00000432306 ARMS2P0C7Q2 107 aa6.3□□□□□ -1.4
VTI1A-202ENST00000432306 FABP2P12104 132 aa6.3□□□□□ -1.4
VTI1A-202ENST00000432306 FAM104BQ5XKR9 115 aa6.3□□□□□ -1.4
VTI1A-202ENST00000432306 PRSS3P2Q8NHM4 247 aa6.3□□□□□ -1.4
VTI1A-202ENST00000432306 PHLDA1Q8WV24 401 aaPredicted RBP6.3□□□□□ -1.4
VTI1A-202ENST00000432306 ITLN2Q8WWU7 325 aaPredicted RBP6.3□□□□□ -1.4
VTI1A-202ENST00000432306 SPATA25Q9BR10 227 aa6.3□□□□□ -1.4
VTI1A-202ENST00000432306 TM2D2Q9BX73 214 aa6.3□□□□□ -1.4
VTI1A-202ENST00000432306 MRPL20Q9BYC9 149 aaKnown RBP6.3□□□□□ -1.4
VTI1A-202ENST00000432306 DEFB127Q9H1M4 99 aa6.3□□□□□ -1.4
VTI1A-202ENST00000432306 RETNQ9HD89 108 aa6.3□□□□□ -1.4
VTI1A-202ENST00000432306 FBN3Q75N90 2809 aa6.3□□□□□ -1.4
VTI1A-202ENST00000432306 A0A1W2PPI3 338 aa6.3□□□□□ -1.4
VTI1A-202ENST00000432306 LEPP41159 167 aa6.3□□□□□ -1.4
VTI1A-202ENST00000432306 ZNF138P52744 262 aa6.3□□□□□ -1.4
VTI1A-202ENST00000432306 SAMD13Q5VXD3 122 aa6.3□□□□□ -1.4
VTI1A-202ENST00000432306 CIARTQ8N365 385 aaPredicted RBP6.3□□□□□ -1.4
VTI1A-202ENST00000432306 VGLL1Q99990 258 aa6.3□□□□□ -1.4
VTI1A-202ENST00000432306 ABCA4P78363 2273 aa6.3□□□□□ -1.4
VTI1A-202ENST00000432306 F8W1H4 67 aa6.29□□□□□ -1.4
VTI1A-202ENST00000432306 ZNF207O43670 478 aaKnown RBP6.29□□□□□ -1.4
VTI1A-202ENST00000432306 EVI2AP22794 236 aa6.29□□□□□ -1.4
VTI1A-202ENST00000432306 CDSNQ15517 529 aa6.29□□□□□ -1.4
VTI1A-202ENST00000432306 VMA21Q3ZAQ7 101 aa6.29□□□□□ -1.4
VTI1A-202ENST00000432306 SPRNQ5BIV9 151 aa6.29□□□□□ -1.4
VTI1A-202ENST00000432306 ORMDL3Q8N138 153 aa6.29□□□□□ -1.4
VTI1A-202ENST00000432306 ZNF414Q96IQ9 312 aa6.29□□□□□ -1.4
VTI1A-202ENST00000432306 C20orf173Q96LM9 149 aa6.29□□□□□ -1.4
VTI1A-202ENST00000432306 SLC25A39Q9BZJ4 359 aaPredicted RBP6.29□□□□□ -1.4
VTI1A-202ENST00000432306 HIGD1AQ9Y241 93 aa6.29□□□□□ -1.4
VTI1A-202ENST00000432306 TRBV19A0A075B6N1 114 aa6.28□□□□□ -1.4
VTI1A-202ENST00000432306 LINC01619G3V211 115 aa6.28□□□□□ -1.4
VTI1A-202ENST00000432306 MRPS12O15235 138 aaKnown RBP6.28□□□□□ -1.4
VTI1A-202ENST00000432306 SMIM13P0DJ93 91 aa6.28□□□□□ -1.4
VTI1A-202ENST00000432306 ORM2P19652 201 aa6.28□□□□□ -1.4
VTI1A-202ENST00000432306 GATA3P23771 443 aa6.28□□□□□ -1.4
VTI1A-202ENST00000432306 IFI27P40305 119 aaPredicted RBP6.28□□□□□ -1.4
VTI1A-202ENST00000432306 RPL32P62910 135 aaKnown RBP6.28□□□□□ -1.4
VTI1A-202ENST00000432306 PDE6HQ13956 83 aa6.28□□□□□ -1.4
VTI1A-202ENST00000432306 LCNL1Q6ZST4 164 aa6.28□□□□□ -1.4
VTI1A-202ENST00000432306 RND1Q92730 232 aa6.28□□□□□ -1.4
VTI1A-202ENST00000432306 IFI27L1Q96BM0 104 aa6.28□□□□□ -1.4
VTI1A-202ENST00000432306 ZC2HC1AQ96GY0 325 aa6.28□□□□□ -1.4
VTI1A-202ENST00000432306 CNFNQ9BYD5 112 aa6.28□□□□□ -1.4
VTI1A-202ENST00000432306 TACC2O95359 2948 aa6.28□□□□□ -1.4
VTI1A-202ENST00000432306 ACANP16112 2415 aa6.28□□□□□ -1.4
VTI1A-202ENST00000432306 WI2-2373I1.2A0A1W2PRP0 233 aa6.28□□□□□ -1.4
VTI1A-202ENST00000432306 E9PLD3 99 aa6.28□□□□□ -1.4
VTI1A-202ENST00000432306 J3QR89 54 aa6.28□□□□□ -1.4
VTI1A-202ENST00000432306 CCL21O00585 134 aa6.28□□□□□ -1.4
VTI1A-202ENST00000432306 PLAUP00749 431 aa6.28□□□□□ -1.4
VTI1A-202ENST00000432306 IGHG4P01861 327 aa6.28□□□□□ -1.4
VTI1A-202ENST00000432306 CRIP1P50238 77 aa6.28□□□□□ -1.4
VTI1A-202ENST00000432306 IGFL2Q6UWQ7 119 aa6.28□□□□□ -1.4
VTI1A-202ENST00000432306 C9orf106Q8NAJ2 232 aa6.28□□□□□ -1.4
VTI1A-202ENST00000432306 SIGMAR1Q99720 223 aa6.28□□□□□ -1.4
VTI1A-202ENST00000432306 THYN1Q9P016 225 aa6.28□□□□□ -1.4
VTI1A-202ENST00000432306 HHLA3Q9XRX5 114 aa6.28□□□□□ -1.4
VTI1A-202ENST00000432306 INTS1Q8N201 2190 aaKnown RBP6.27□□□□□ -1.41
VTI1A-202ENST00000432306 NIPBLQ6KC79 2804 aaeCLIP6.27□□□□□ -1.41
VTI1A-202ENST00000432306 SMIM9A6NGZ8 99 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms