RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 PGPA6NDG6 321 aa14.57□□□□□ -0.08
HSPG2-205ENST00000427897 KLLNB2CW77 178 aa14.57□□□□□ -0.08
HSPG2-205ENST00000427897 UMAD1C9J7I0 102 aa14.57□□□□□ -0.08
HSPG2-205ENST00000427897 EIF3GO75821 320 aaKnown RBP eCLIP14.57□□□□□ -0.08
HSPG2-205ENST00000427897 CRISP2P16562 243 aa14.57□□□□□ -0.08
HSPG2-205ENST00000427897 RNF212Q495C1 297 aa14.57□□□□□ -0.08
HSPG2-205ENST00000427897 ZNF503Q96F45 646 aa14.57□□□□□ -0.08
HSPG2-205ENST00000427897 RBAKDNA6NC62 111 aa14.56□□□□□ -0.08
HSPG2-205ENST00000427897 HMGB3O15347 200 aaKnown RBP14.56□□□□□ -0.08
HSPG2-205ENST00000427897 RAB24Q969Q5 203 aa14.56□□□□□ -0.08
HSPG2-205ENST00000427897 FAM19A4Q96LR4 140 aa14.56□□□□□ -0.08
HSPG2-205ENST00000427897 ZNF324O75467 553 aaPredicted RBP14.55□□□□□ -0.08
HSPG2-205ENST00000427897 Q8TAT8 98 aa14.55□□□□□ -0.08
HSPG2-205ENST00000427897 OTORQ9NRC9 128 aa14.55□□□□□ -0.08
HSPG2-205ENST00000427897 GSN-AS1Q9NRJ2 163 aa14.55□□□□□ -0.08
HSPG2-205ENST00000427897 IGLV2-18A0A075B6J9 118 aa14.54□□□□□ -0.08
HSPG2-205ENST00000427897 TRGV2A0A075B6R0 118 aa14.54□□□□□ -0.08
HSPG2-205ENST00000427897 CTXND1A0A1B0GTU2 59 aa14.54□□□□□ -0.08
HSPG2-205ENST00000427897 DIRC3C9JPN6 131 aa14.54□□□□□ -0.08
HSPG2-205ENST00000427897 STAG3L2P0CL84 134 aa14.54□□□□□ -0.08
HSPG2-205ENST00000427897 STAG3L3P0CL85 134 aa14.54□□□□□ -0.08
HSPG2-205ENST00000427897 NKX2-5P52952 324 aaPredicted RBP14.54□□□□□ -0.08
HSPG2-205ENST00000427897 DAZ2Q13117 558 aaKnown RBP14.54□□□□□ -0.08
HSPG2-205ENST00000427897 TMED6Q8WW62 240 aa14.54□□□□□ -0.08
HSPG2-205ENST00000427897 ANXA2RQ3ZCQ2 193 aa14.53□□□□□ -0.08
HSPG2-205ENST00000427897 DPPA3Q6W0C5 159 aa14.53□□□□□ -0.08
HSPG2-205ENST00000427897 ZFAND2AQ8N6M9 145 aa14.53□□□□□ -0.08
HSPG2-205ENST00000427897 LINC00467Q9BRT7 94 aa14.53□□□□□ -0.08
HSPG2-205ENST00000427897 IGHV1OR15-1A0A075B7D0 117 aa14.52□□□□□ -0.09
HSPG2-205ENST00000427897 TRGV1A0A0A0MS02 117 aa14.52□□□□□ -0.09
HSPG2-205ENST00000427897 TRBV7-9A0A0J9YWB2 115 aa14.52□□□□□ -0.09
HSPG2-205ENST00000427897 CXorf1O96002 111 aa14.52□□□□□ -0.09
HSPG2-205ENST00000427897 RAB5CP51148 216 aa14.52□□□□□ -0.09
HSPG2-205ENST00000427897 CCL18P55774 89 aa14.52□□□□□ -0.09
HSPG2-205ENST00000427897 ARL14EPLP0DKL9 152 aa14.51□□□□□ -0.09
HSPG2-205ENST00000427897 Q6ZTI0 123 aa14.51□□□□□ -0.09
HSPG2-205ENST00000427897 LENEPQ9Y5L5 61 aa14.51□□□□□ -0.09
HSPG2-205ENST00000427897 TRAV26-1A0A087WT03 109 aa14.5□□□□□ -0.09
HSPG2-205ENST00000427897 FAM3BP58499 235 aaPredicted RBP14.5□□□□□ -0.09
HSPG2-205ENST00000427897 GOLT1AQ6ZVE7 132 aa14.5□□□□□ -0.09
HSPG2-205ENST00000427897 IQCF2Q8IXL9 164 aa14.5□□□□□ -0.09
HSPG2-205ENST00000427897 TMEM167BQ9NRX6 74 aa14.5□□□□□ -0.09
HSPG2-205ENST00000427897 A0A0J9YY99 117 aa14.49□□□□□ -0.09
HSPG2-205ENST00000427897 GCHFRP30047 84 aa14.49□□□□□ -0.09
HSPG2-205ENST00000427897 ZNF415Q09FC8 603 aa14.49□□□□□ -0.09
HSPG2-205ENST00000427897 ZNF726P1Q15940 193 aa14.49□□□□□ -0.09
HSPG2-205ENST00000427897 LGALS9BQ3B8N2 356 aa14.49□□□□□ -0.09
HSPG2-205ENST00000427897 MUC21Q5SSG8 566 aa14.49□□□□□ -0.09
HSPG2-205ENST00000427897 IBA57Q5T440 356 aaKnown RBP14.49□□□□□ -0.09
HSPG2-205ENST00000427897 PRR9Q5T870 116 aa14.49□□□□□ -0.09
HSPG2-205ENST00000427897 FAM159AQ6UWV7 190 aa14.49□□□□□ -0.09
HSPG2-205ENST00000427897 LINC00336Q6ZUF6 198 aa14.49□□□□□ -0.09
HSPG2-205ENST00000427897 LINC00612Q8N6U2 182 aa14.49□□□□□ -0.09
HSPG2-205ENST00000427897 FAM213BQ8TBF2 198 aa14.49□□□□□ -0.09
HSPG2-205ENST00000427897 TP53TG3Q9ULZ0 132 aa14.49□□□□□ -0.09
HSPG2-205ENST00000427897 KLF12Q9Y4X4 402 aa14.49□□□□□ -0.09
HSPG2-205ENST00000427897 KMT2AQ03164 3969 aa14.49□□□□□ -0.09
HSPG2-205ENST00000427897 MAP1LC3B2A6NCE7 125 aa14.48□□□□□ -0.09
HSPG2-205ENST00000427897 K7EQM0 130 aa14.48□□□□□ -0.09
HSPG2-205ENST00000427897 TCL1AP56279 114 aa14.48□□□□□ -0.09
HSPG2-205ENST00000427897 SOHLH1Q5JUK2 328 aa14.48□□□□□ -0.09
HSPG2-205ENST00000427897 SSX7Q7RTT5 188 aa14.48□□□□□ -0.09
HSPG2-205ENST00000427897 ARL6IP6Q8N6S5 226 aa14.48□□□□□ -0.09
HSPG2-205ENST00000427897 C11orf72Q8NBR9 251 aa14.48□□□□□ -0.09
HSPG2-205ENST00000427897 MAP1LC3BQ9GZQ8 125 aa14.48□□□□□ -0.09
HSPG2-205ENST00000427897 TMPRSS5Q9H3S3 457 aa14.48□□□□□ -0.09
HSPG2-205ENST00000427897 SUN5Q8TC36 379 aa14.47□□□□□ -0.09
HSPG2-205ENST00000427897 NDFIP1Q9BT67 221 aa14.47□□□□□ -0.09
HSPG2-205ENST00000427897 NAGKQ9UJ70 344 aa14.47□□□□□ -0.09
HSPG2-205ENST00000427897 EPPK1P58107 5090 aaKnown RBP14.47□□□□□ -0.09
HSPG2-205ENST00000427897 FHITP49789 147 aa14.46□□□□□ -0.09
HSPG2-205ENST00000427897 SULT1A2P50226 295 aa14.46□□□□□ -0.09
HSPG2-205ENST00000427897 Q6ZQT7 251 aa14.46□□□□□ -0.09
HSPG2-205ENST00000427897 SPINK4O60575 86 aa14.45□□□□□ -0.1
HSPG2-205ENST00000427897 HOXA5P20719 270 aa14.45□□□□□ -0.1
HSPG2-205ENST00000427897 GNG5P63218 68 aa14.45□□□□□ -0.1
HSPG2-205ENST00000427897 SFT2D1Q8WV19 159 aa14.45□□□□□ -0.1
HSPG2-205ENST00000427897 MBD3L1Q8WWY6 194 aa14.45□□□□□ -0.1
HSPG2-205ENST00000427897 TREM1Q9NP99 234 aa14.45□□□□□ -0.1
HSPG2-205ENST00000427897 MRPL16Q9NX20 251 aaKnown RBP14.45□□□□□ -0.1
HSPG2-205ENST00000427897 BOLA1Q9Y3E2 137 aa14.45□□□□□ -0.1
HSPG2-205ENST00000427897 TRGV11A0A075B6L2 103 aa14.44□□□□□ -0.1
HSPG2-205ENST00000427897 SERTM2A0A1B0GWG4 89 aa14.44□□□□□ -0.1
HSPG2-205ENST00000427897 H2AFB1P0C5Y9 115 aa14.44□□□□□ -0.1
HSPG2-205ENST00000427897 Q6AWC8 147 aa14.44□□□□□ -0.1
HSPG2-205ENST00000427897 TEX46H3BTG2 121 aa14.43□□□□□ -0.1
HSPG2-205ENST00000427897 IGHV3-53P01767 116 aa14.43□□□□□ -0.1
HSPG2-205ENST00000427897 FGF8P55075 233 aaPredicted RBP14.43□□□□□ -0.1
HSPG2-205ENST00000427897 SUMO1P63165 101 aaKnown RBP14.43□□□□□ -0.1
HSPG2-205ENST00000427897 TMEM183BQ1AE95 376 aa14.43□□□□□ -0.1
HSPG2-205ENST00000427897 TMEM183AQ8IXX5 376 aa14.43□□□□□ -0.1
HSPG2-205ENST00000427897 C5orf17Q8NAS9 161 aa14.43□□□□□ -0.1
HSPG2-205ENST00000427897 TRAV8-1A0A0A6YYK1 113 aa14.42□□□□□ -0.1
HSPG2-205ENST00000427897 TRAV21A0A0B4J279 112 aa14.42□□□□□ -0.1
HSPG2-205ENST00000427897 PRSS29PA6NIE9 313 aa14.42□□□□□ -0.1
HSPG2-205ENST00000427897 H3BNG1 76 aa14.42□□□□□ -0.1
HSPG2-205ENST00000427897 SGK494Q96LW2 274 aa14.42□□□□□ -0.1
HSPG2-205ENST00000427897 C18orf15Q96N68 181 aa14.42□□□□□ -0.1
HSPG2-205ENST00000427897 NKX6-2Q9C056 277 aaPredicted RBP14.42□□□□□ -0.1
HSPG2-205ENST00000427897 VPS13DQ5THJ4 4388 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms