RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 MOB3BQ86TA1 216 aa3.81□□□□□ -1.8
LINC00458-202ENST00000427299 PPP1R27Q86WC6 154 aa3.81□□□□□ -1.8
LINC00458-202ENST00000427299 DEFB124Q8NES8 71 aa3.81□□□□□ -1.8
LINC00458-202ENST00000427299 OR4C5Q8NGB2 326 aa3.81□□□□□ -1.8
LINC00458-202ENST00000427299 OR2T6Q8NHC8 308 aa3.81□□□□□ -1.8
LINC00458-202ENST00000427299 BLNKQ8WV28 456 aa3.81□□□□□ -1.8
LINC00458-202ENST00000427299 ONECUT1Q9UBC0 465 aa3.81□□□□□ -1.8
LINC00458-202ENST00000427299 ZNF835Q9Y2P0 537 aa3.81□□□□□ -1.8
LINC00458-202ENST00000427299 NCOR1O75376 2440 aa3.81□□□□□ -1.8
LINC00458-202ENST00000427299 TRAV5A0A0B4J249 113 aa3.8□□□□□ -1.8
LINC00458-202ENST00000427299 A6NDN8 102 aa3.8□□□□□ -1.8
LINC00458-202ENST00000427299 C2orf70A6NJV1 201 aa3.8□□□□□ -1.8
LINC00458-202ENST00000427299 H3BRN7 92 aa3.8□□□□□ -1.8
LINC00458-202ENST00000427299 TCF21O43680 179 aa3.8□□□□□ -1.8
LINC00458-202ENST00000427299 ENSAO43768 121 aaKnown RBP3.8□□□□□ -1.8
LINC00458-202ENST00000427299 IGLC1P0CG04 106 aa3.8□□□□□ -1.8
LINC00458-202ENST00000427299 HINT1P49773 126 aaPredicted RBP3.8□□□□□ -1.8
LINC00458-202ENST00000427299 RAB9AP51151 201 aa3.8□□□□□ -1.8
LINC00458-202ENST00000427299 FOXA3P55318 350 aaPredicted RBP3.8□□□□□ -1.8
LINC00458-202ENST00000427299 SEC11AP67812 179 aa3.8□□□□□ -1.8
LINC00458-202ENST00000427299 PSG9Q00887 426 aa3.8□□□□□ -1.8
LINC00458-202ENST00000427299 BSPH1Q075Z2 132 aa3.8□□□□□ -1.8
LINC00458-202ENST00000427299 C10orf55Q5SWW7 151 aa3.8□□□□□ -1.8
LINC00458-202ENST00000427299 PATE2Q6UY27 113 aa3.8□□□□□ -1.8
LINC00458-202ENST00000427299 TCF24Q7RTU0 167 aa3.8□□□□□ -1.8
LINC00458-202ENST00000427299 FAM19A2Q8N3H0 131 aa3.8□□□□□ -1.8
LINC00458-202ENST00000427299 OR1N2Q8NGR9 330 aa3.8□□□□□ -1.8
LINC00458-202ENST00000427299 SRSF12Q8WXF0 261 aaKnown RBP3.8□□□□□ -1.8
LINC00458-202ENST00000427299 SLC25A39Q9BZJ4 359 aaPredicted RBP3.8□□□□□ -1.8
LINC00458-202ENST00000427299 THYN1Q9P016 225 aa3.8□□□□□ -1.8
LINC00458-202ENST00000427299 PEF1Q9UBV8 284 aaKnown RBP3.8□□□□□ -1.8
LINC00458-202ENST00000427299 SIGLEC9Q9Y336 463 aa3.8□□□□□ -1.8
LINC00458-202ENST00000427299 ZNF318Q5VUA4 2279 aa3.79□□□□□ -1.8
LINC00458-202ENST00000427299 IGHV1-3A0A0C4DH29 117 aa3.79□□□□□ -1.8
LINC00458-202ENST00000427299 IGHV2-70DA0A0C4DH43 119 aa3.79□□□□□ -1.8
LINC00458-202ENST00000427299 K7EM74 188 aa3.79□□□□□ -1.8
LINC00458-202ENST00000427299 K7EP13 123 aa3.79□□□□□ -1.8
LINC00458-202ENST00000427299 HBDP02042 147 aa3.79□□□□□ -1.8
LINC00458-202ENST00000427299 IGLL1P15814 213 aa3.79□□□□□ -1.8
LINC00458-202ENST00000427299 DLX6P56179 175 aa3.79□□□□□ -1.8
LINC00458-202ENST00000427299 COTL1Q14019 142 aa3.79□□□□□ -1.8
LINC00458-202ENST00000427299 VAMP3Q15836 100 aa3.79□□□□□ -1.8
LINC00458-202ENST00000427299 PSG3Q16557 428 aa3.79□□□□□ -1.8
LINC00458-202ENST00000427299 TDRG1Q3Y452 100 aa3.79□□□□□ -1.8
LINC00458-202ENST00000427299 SPRNQ5BIV9 151 aa3.79□□□□□ -1.8
LINC00458-202ENST00000427299 FAM120AOSQ5T036 256 aa3.79□□□□□ -1.8
LINC00458-202ENST00000427299 LINC01545Q5VT33 79 aa3.79□□□□□ -1.8
LINC00458-202ENST00000427299 EBLN2Q6P2I7 272 aa3.79□□□□□ -1.8
LINC00458-202ENST00000427299 GOLT1AQ6ZVE7 132 aa3.79□□□□□ -1.8
LINC00458-202ENST00000427299 SMIM15Q7Z3B0 74 aa3.79□□□□□ -1.8
LINC00458-202ENST00000427299 SPATA12Q7Z6I5 190 aa3.79□□□□□ -1.8
LINC00458-202ENST00000427299 RPRMLQ8N4K4 120 aa3.79□□□□□ -1.8
LINC00458-202ENST00000427299 OR9G4Q8NGQ1 327 aa3.79□□□□□ -1.8
LINC00458-202ENST00000427299 CCL17Q92583 94 aa3.79□□□□□ -1.8
LINC00458-202ENST00000427299 RNASE6Q93091 150 aaKnown RBP3.79□□□□□ -1.8
LINC00458-202ENST00000427299 PGLYRP4Q96LB8 373 aa3.79□□□□□ -1.8
LINC00458-202ENST00000427299 AP1S3Q96PC3 154 aa3.79□□□□□ -1.8
LINC00458-202ENST00000427299 SHANK2-AS3Q9BTD1 123 aa3.79□□□□□ -1.8
LINC00458-202ENST00000427299 MCRIP2Q9BUT9 160 aaKnown RBP3.79□□□□□ -1.8
LINC00458-202ENST00000427299 INSIG2Q9Y5U4 225 aa3.79□□□□□ -1.8
LINC00458-202ENST00000427299 PLXNB1O43157 2135 aa3.79□□□□□ -1.8
LINC00458-202ENST00000427299 DMDP11532 3685 aa3.79□□□□□ -1.8
LINC00458-202ENST00000427299 ICE1Q9Y2F5 2266 aa3.78□□□□□ -1.8
LINC00458-202ENST00000427299 TRBV19A0A075B6N1 114 aa3.78□□□□□ -1.8
LINC00458-202ENST00000427299 SPAARA0A1B0GVQ0 90 aa3.78□□□□□ -1.8
LINC00458-202ENST00000427299 OOSP1A8MZH6 123 aa3.78□□□□□ -1.8
LINC00458-202ENST00000427299 SHISA9B4DS77 424 aa3.78□□□□□ -1.8
LINC00458-202ENST00000427299 BUB1B-PAK6H3BSN5 160 aa3.78□□□□□ -1.8
LINC00458-202ENST00000427299 I3L2K1 104 aa3.78□□□□□ -1.8
LINC00458-202ENST00000427299 K7ERU9 68 aa3.78□□□□□ -1.8
LINC00458-202ENST00000427299 M0R1W7 72 aa3.78□□□□□ -1.8
LINC00458-202ENST00000427299 NBR2O15453 112 aa3.78□□□□□ -1.8
LINC00458-202ENST00000427299 GNG7O60262 68 aa3.78□□□□□ -1.8
LINC00458-202ENST00000427299 NXPH4O95158 308 aa3.78□□□□□ -1.8
LINC00458-202ENST00000427299 CNIH1O95406 144 aa3.78□□□□□ -1.8
LINC00458-202ENST00000427299 IGLV1-47P01700 117 aa3.78□□□□□ -1.8
LINC00458-202ENST00000427299 PPBPP02775 128 aa3.78□□□□□ -1.8
LINC00458-202ENST00000427299 CRYGBP07316 175 aa3.78□□□□□ -1.8
LINC00458-202ENST00000427299 COX8AP10176 69 aa3.78□□□□□ -1.8
LINC00458-202ENST00000427299 GATA1P15976 413 aaPredicted RBP3.78□□□□□ -1.8
LINC00458-202ENST00000427299 RPL7P18124 248 aaKnown RBP3.78□□□□□ -1.8
LINC00458-202ENST00000427299 GPR183P32249 361 aa3.78□□□□□ -1.8
LINC00458-202ENST00000427299 BMI1P35226 326 aa3.78□□□□□ -1.8
LINC00458-202ENST00000427299 ID1P41134 155 aa3.78□□□□□ -1.8
LINC00458-202ENST00000427299 GPR6P46095 362 aaPredicted RBP3.78□□□□□ -1.8
LINC00458-202ENST00000427299 TFPI2P48307 235 aa3.78□□□□□ -1.8
LINC00458-202ENST00000427299 SEC61GP60059 68 aa3.78□□□□□ -1.8
LINC00458-202ENST00000427299 HSD52Q0P140 79 aa3.78□□□□□ -1.8
LINC00458-202ENST00000427299 LGALS9BQ3B8N2 356 aa3.78□□□□□ -1.8
LINC00458-202ENST00000427299 SAPCD1Q5SSQ6 148 aa3.78□□□□□ -1.8
LINC00458-202ENST00000427299 LGALS9CQ6DKI2 356 aa3.78□□□□□ -1.8
LINC00458-202ENST00000427299 HCP5Q6MZN7 132 aa3.78□□□□□ -1.8
LINC00458-202ENST00000427299 ZNF493Q6ZR52 646 aa3.78□□□□□ -1.8
LINC00458-202ENST00000427299 GTF2H5Q6ZYL4 71 aa3.78□□□□□ -1.8
LINC00458-202ENST00000427299 PRNTQ86SH4 94 aa3.78□□□□□ -1.8
LINC00458-202ENST00000427299 ATOH7Q8N100 152 aa3.78□□□□□ -1.8
LINC00458-202ENST00000427299 ORMDL3Q8N138 153 aa3.78□□□□□ -1.8
LINC00458-202ENST00000427299 DEFB125Q8N687 156 aa3.78□□□□□ -1.8
LINC00458-202ENST00000427299 GTSF1Q8WW33 167 aa3.78□□□□□ -1.8
LINC00458-202ENST00000427299 DLX4Q92988 240 aaPredicted RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms