RNA–Protein interactions for RNA: ENST00000425804.1

R3HDM1-205, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-205ENST00000425804 ZNF471Q9BX82 626 aaPredicted RBP1.67□□□□□ -2.14
R3HDM1-205ENST00000425804 SMIM3Q9BZL3 60 aa1.67□□□□□ -2.14
R3HDM1-205ENST00000425804 IFI27L2Q9H2X8 130 aa1.67□□□□□ -2.14
R3HDM1-205ENST00000425804 TUBA4BQ9H853 241 aa1.67□□□□□ -2.14
R3HDM1-205ENST00000425804 NDUFB11Q9NX14 153 aa1.67□□□□□ -2.14
R3HDM1-205ENST00000425804 C21orf62Q9NYP8 219 aa1.67□□□□□ -2.14
R3HDM1-205ENST00000425804 NAT8BQ9UHF3 227 aa1.67□□□□□ -2.14
R3HDM1-205ENST00000425804 ERG28Q9UKR5 140 aa1.67□□□□□ -2.14
R3HDM1-205ENST00000425804 R4GMQ9 66 aa1.67□□□□□ -2.14
R3HDM1-205ENST00000425804 LAMA5O15230 3695 aa1.67□□□□□ -2.14
R3HDM1-205ENST00000425804 HEATR1Q9H583 2144 aaKnown RBP1.67□□□□□ -2.14
R3HDM1-205ENST00000425804 TENM4Q6N022 2769 aa1.67□□□□□ -2.14
R3HDM1-205ENST00000425804 NCOA6Q14686 2063 aaPredicted RBP1.67□□□□□ -2.14
R3HDM1-205ENST00000425804 MED12Q93074 2177 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 MYO18BQ8IUG5 2567 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 PIEZO2Q9H5I5 2752 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 IGHV3-15A0A0B4J1V0 119 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 TRAV41A0A0B4J266 112 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 IGHV1-3A0A0C4DH29 117 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 IGHV3-64DA0A0J9YX35 117 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 TRDV1A0A1B0GX56 115 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 TMEM223A0PJW6 202 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 C9orf170A2RU37 121 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 A6NDX4 124 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 C17orf51A8MQB3 221 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 I3L521 148 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 J3QRE1 110 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 M0R129 80 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 M0R135 149 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 RBFOX2O43251 390 aaKnown RBP eCLIP1.66□□□□□ -2.141e-6■■■■□ 23
R3HDM1-205ENST00000425804 DPM2O94777 84 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 CYB5AP00167 134 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 S100A8P05109 93 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 GIG44P09565 113 aaPredicted RBP1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 UCHL1P09936 223 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 METTL15P1P0C7V9 234 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 LINC00869P0C866 280 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 NFYBP25208 207 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 S100A4P26447 101 aaKnown RBP1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 CSN1S1P47710 185 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 RPL30P62888 115 aaKnown RBP1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 TAF9Q16594 264 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 RRN3P1Q2M238 152 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 HSD17B12Q53GQ0 312 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 LINC01590Q5TEZ4 76 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 FAM27BQ5VT28 67 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 XAF1Q6GPH4 301 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 HRCT1Q6UXD1 115 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 LCA10Q71F78 164 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 KTN1-AS1Q86SY8 53 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 PRR15Q8IV56 129 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 AMN1Q8IY45 258 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 C15orf56Q8N910 161 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 Q8N976 141 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 Q8N9W7 124 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 RPS4Y2Q8TD47 263 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 H1FXQ92522 213 aaKnown RBP1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 SLAMF6Q96DU3 332 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 BORCS8Q96FH0 119 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 ZNF799Q96GE5 643 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 AP1S3Q96PC3 154 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 B9D2Q9BPU9 175 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 PDCD10Q9BUL8 212 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 COA4Q9NYJ1 87 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 ABRACLQ9P1F3 81 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 ZNRD1Q9P1U0 126 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 KLK5Q9Y337 293 aaPredicted RBP1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 ALPK2Q86TB3 2170 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 NBASA2RRP1 2371 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 TLN1Q9Y490 2541 aaKnown RBP1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 ESPL1Q14674 2120 aa1.66□□□□□ -2.14
R3HDM1-205ENST00000425804 KALRNO60229 2985 aa1.65□□□□□ -2.14
R3HDM1-205ENST00000425804 SPTAN1Q13813 2472 aaKnown RBP1.65□□□□□ -2.14
R3HDM1-205ENST00000425804 COL6A6A6NMZ7 2263 aa1.65□□□□□ -2.14
R3HDM1-205ENST00000425804 FREM1Q5H8C1 2179 aa1.65□□□□□ -2.14
R3HDM1-205ENST00000425804 TRAV1-2A0A0B4J238 106 aa1.65□□□□□ -2.15
R3HDM1-205ENST00000425804 IGKV1-12A0A0C4DH73 117 aa1.65□□□□□ -2.15
R3HDM1-205ENST00000425804 LOC107986453A0A1B0GWG9 222 aa1.65□□□□□ -2.15
R3HDM1-205ENST00000425804 MEIS3P1A6NDR6 274 aa1.65□□□□□ -2.15
R3HDM1-205ENST00000425804 GGT3PA6NGU5 568 aa1.65□□□□□ -2.15
R3HDM1-205ENST00000425804 FABP5P3A8MUU1 101 aa1.65□□□□□ -2.15
R3HDM1-205ENST00000425804 TAX1BP3O14907 124 aa1.65□□□□□ -2.15
R3HDM1-205ENST00000425804 RER1O15258 196 aa1.65□□□□□ -2.15
R3HDM1-205ENST00000425804 GNG7O60262 68 aa1.65□□□□□ -2.15
R3HDM1-205ENST00000425804 GGCTO75223 188 aaKnown RBP1.65□□□□□ -2.15
R3HDM1-205ENST00000425804 LYZL6O75951 148 aa1.65□□□□□ -2.15
R3HDM1-205ENST00000425804 IGKV1D-12P01611 117 aa1.65□□□□□ -2.15
R3HDM1-205ENST00000425804 IGHV1-46P01743 117 aa1.65□□□□□ -2.15
R3HDM1-205ENST00000425804 TRGC2P03986 189 aa1.65□□□□□ -2.15
R3HDM1-205ENST00000425804 PRM2P04554 102 aa1.65□□□□□ -2.15
R3HDM1-205ENST00000425804 OR5AC1P0C628 307 aa1.65□□□□□ -2.15
R3HDM1-205ENST00000425804 TLX1NBP0CAT3 122 aa1.65□□□□□ -2.15
R3HDM1-205ENST00000425804 INAFM2P0DMQ5 153 aa1.65□□□□□ -2.15
R3HDM1-205ENST00000425804 FAUP35544 74 aaKnown RBP1.65□□□□□ -2.15
R3HDM1-205ENST00000425804 RBP2P50120 134 aa1.65□□□□□ -2.15
R3HDM1-205ENST00000425804 ZNF80P51504 273 aaPredicted RBP1.65□□□□□ -2.15
R3HDM1-205ENST00000425804 NDUFA6P56556 154 aa1.65□□□□□ -2.15
R3HDM1-205ENST00000425804 TAS2R20P59543 309 aa1.65□□□□□ -2.15
R3HDM1-205ENST00000425804 LSM3P62310 102 aaKnown RBP1.65□□□□□ -2.15
R3HDM1-205ENST00000425804 RPS25P62851 125 aaKnown RBP1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms