RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 ZMAT4Q9H898 229 aa12.92□□□□□ -0.34
PKP4-204ENST00000421462 CEACAM4O75871 244 aa12.92□□□□□ -0.34
PKP4-204ENST00000421462 ATP5LO75964 103 aa12.92□□□□□ -0.34
PKP4-204ENST00000421462 PSMB2P49721 201 aa12.92□□□□□ -0.34
PKP4-204ENST00000421462 RRN3P1Q2M238 152 aa12.92□□□□□ -0.34
PKP4-204ENST00000421462 RNASE6Q93091 150 aaKnown RBP12.92□□□□□ -0.34
PKP4-204ENST00000421462 PRSS47A8MTI9 375 aa12.91□□□□□ -0.34
PKP4-204ENST00000421462 CRYBA4P53673 196 aa12.91□□□□□ -0.34
PKP4-204ENST00000421462 GEMIN7Q9H840 131 aaKnown RBP12.91□□□□□ -0.34
PKP4-204ENST00000421462 RALYQ9UKM9 306 aaKnown RBP12.91□□□□□ -0.34
PKP4-204ENST00000421462 RPL7P18124 248 aaKnown RBP12.91□□□□□ -0.34
PKP4-204ENST00000421462 MFAP4P55083 255 aa12.91□□□□□ -0.34
PKP4-204ENST00000421462 KLRD1Q13241 179 aa12.9□□□□□ -0.34
PKP4-204ENST00000421462 SCGB1D4Q6XE38 83 aa12.9□□□□□ -0.34
PKP4-204ENST00000421462 ZNF575Q86XF7 245 aa12.9□□□□□ -0.34
PKP4-204ENST00000421462 OR11H12B2RN74 326 aa12.9□□□□□ -0.34
PKP4-204ENST00000421462 LY6HO94772 140 aa12.9□□□□□ -0.34
PKP4-204ENST00000421462 ASCL5Q7RTU5 278 aa12.9□□□□□ -0.34
PKP4-204ENST00000421462 OR11H1Q8NG94 326 aa12.9□□□□□ -0.34
PKP4-204ENST00000421462 OR11H2Q8NH07 326 aa12.9□□□□□ -0.34
PKP4-204ENST00000421462 VKORC1Q9BQB6 163 aa12.9□□□□□ -0.34
PKP4-204ENST00000421462 SCGB1A1P11684 91 aa12.9□□□□□ -0.35
PKP4-204ENST00000421462 LAGE3Q14657 143 aa12.9□□□□□ -0.35
PKP4-204ENST00000421462 SPATA25Q9BR10 227 aa12.9□□□□□ -0.35
PKP4-204ENST00000421462 C21orf62Q9NYP8 219 aa12.9□□□□□ -0.35
PKP4-204ENST00000421462 SPINK8P0C7L1 97 aa12.89□□□□□ -0.35
PKP4-204ENST00000421462 EMP1P54849 157 aa12.89□□□□□ -0.35
PKP4-204ENST00000421462 SRSF9Q13242 221 aaKnown RBP eCLIP12.89□□□□□ -0.35
PKP4-204ENST00000421462 PDE6HQ13956 83 aa12.89□□□□□ -0.35
PKP4-204ENST00000421462 SPANXN1Q5VSR9 72 aa12.89□□□□□ -0.35
PKP4-204ENST00000421462 Q8N8P6 123 aa12.89□□□□□ -0.35
PKP4-204ENST00000421462 PRO3102Q9H379 93 aa12.89□□□□□ -0.35
PKP4-204ENST00000421462 SMAD5-AS1Q9Y6J3 95 aa12.89□□□□□ -0.35
PKP4-204ENST00000421462 LINC01549A6NIU2 74 aa12.89□□□□□ -0.35
PKP4-204ENST00000421462 H3BVH4 76 aa12.89□□□□□ -0.35
PKP4-204ENST00000421462 HOXA3O43365 443 aaPredicted RBP12.89□□□□□ -0.35
PKP4-204ENST00000421462 HLA-DRB4P13762 266 aa12.89□□□□□ -0.35
PKP4-204ENST00000421462 NUP37Q8NFH4 326 aa12.89□□□□□ -0.35
PKP4-204ENST00000421462 HIF1ANQ9NWT6 349 aa12.89□□□□□ -0.35
PKP4-204ENST00000421462 HLA-DRB4X5D2U9 266 aa12.89□□□□□ -0.35
PKP4-204ENST00000421462 LINC01548A6NM66 108 aa12.88□□□□□ -0.35
PKP4-204ENST00000421462 DEFB123Q8N688 67 aa12.88□□□□□ -0.35
PKP4-204ENST00000421462 C8orf31Q8N9H6 132 aa12.88□□□□□ -0.35
PKP4-204ENST00000421462 AKAP13Q12802 2813 aa12.88□□□□□ -0.35
PKP4-204ENST00000421462 ZFP2Q6ZN57 461 aa12.88□□□□□ -0.35
PKP4-204ENST00000421462 DEFB124Q8NES8 71 aa12.88□□□□□ -0.35
PKP4-204ENST00000421462 C11orf21Q9P2W6 132 aa12.88□□□□□ -0.35
PKP4-204ENST00000421462 SMPXQ9UHP9 88 aa12.88□□□□□ -0.35
PKP4-204ENST00000421462 NBR2O15453 112 aa12.87□□□□□ -0.35
PKP4-204ENST00000421462 MT-ATP8P03928 68 aa12.87□□□□□ -0.35
PKP4-204ENST00000421462 ZNF502Q8TBZ5 544 aa12.87□□□□□ -0.35
PKP4-204ENST00000421462 FANCD2OSQ96PS1 177 aa12.87□□□□□ -0.35
PKP4-204ENST00000421462 IGHG4P01861 327 aa12.87□□□□□ -0.35
PKP4-204ENST00000421462 PTPRZ1P23471 2315 aaPredicted RBP12.87□□□□□ -0.35
PKP4-204ENST00000421462 IGKV3D-20A0A0C4DH25 116 aa12.87□□□□□ -0.35
PKP4-204ENST00000421462 A0A087WX48 190 aa12.86□□□□□ -0.35
PKP4-204ENST00000421462 THBDP07204 575 aa12.86□□□□□ -0.35
PKP4-204ENST00000421462 IGFL2Q6UWQ7 119 aa12.86□□□□□ -0.35
PKP4-204ENST00000421462 RAB1BQ9H0U4 201 aa12.86□□□□□ -0.35
PKP4-204ENST00000421462 ANKHD1Q8IWZ3 2542 aaKnown RBP12.86□□□□□ -0.35
PKP4-204ENST00000421462 FOXI1Q12951 378 aa12.86□□□□□ -0.35
PKP4-204ENST00000421462 KLHL30-AS1Q8NEE0 82 aa12.86□□□□□ -0.35
PKP4-204ENST00000421462 SCGB3A1Q96QR1 104 aa12.86□□□□□ -0.35
PKP4-204ENST00000421462 PRO0461Q9UI25 63 aa12.86□□□□□ -0.35
PKP4-204ENST00000421462 A0A0G2JNJ9 132 aa12.85□□□□□ -0.35
PKP4-204ENST00000421462 TNFRSF13BO14836 293 aaPredicted RBP12.85□□□□□ -0.35
PKP4-204ENST00000421462 NDPQ00604 133 aa12.85□□□□□ -0.35
PKP4-204ENST00000421462 PIFOQ8TCI5 191 aa12.85□□□□□ -0.35
PKP4-204ENST00000421462 Q9UFV3 132 aa12.85□□□□□ -0.35
PKP4-204ENST00000421462 RAXQ9Y2V3 346 aa12.85□□□□□ -0.35
PKP4-204ENST00000421462 M0R381 172 aa12.85□□□□□ -0.35
PKP4-204ENST00000421462 NFE4Q86UQ8 179 aa12.85□□□□□ -0.35
PKP4-204ENST00000421462 MRAP2Q96G30 205 aa12.85□□□□□ -0.35
PKP4-204ENST00000421462 SHISA9B4DS77 424 aa12.85□□□□□ -0.35
PKP4-204ENST00000421462 F8W735 103 aaPredicted RBP12.85□□□□□ -0.35
PKP4-204ENST00000421462 MORN3Q6PF18 240 aaPredicted RBP12.85□□□□□ -0.35
PKP4-204ENST00000421462 MYMXA0A1B0GTQ4 84 aa12.84□□□□□ -0.35
PKP4-204ENST00000421462 ZNF815PA8K554 130 aa12.84□□□□□ -0.35
PKP4-204ENST00000421462 C8orf86Q6ZUL3 223 aa12.84□□□□□ -0.35
PKP4-204ENST00000421462 VSTM5A8MXK1 200 aa12.84□□□□□ -0.35
PKP4-204ENST00000421462 E7EQL1 145 aa12.84□□□□□ -0.35
PKP4-204ENST00000421462 IGLV2-18A0A075B6J9 118 aa12.83□□□□□ -0.36
PKP4-204ENST00000421462 TRBV7-3A0A075B6L6 115 aa12.83□□□□□ -0.36
PKP4-204ENST00000421462 SRSF1Q07955 248 aaKnown RBP eCLIP12.83□□□□□ -0.369e-8■□□□□ 9.8
PKP4-204ENST00000421462 TLN1Q9Y490 2541 aaKnown RBP12.83□□□□□ -0.36
PKP4-204ENST00000421462 COL6A6A6NMZ7 2263 aa12.83□□□□□ -0.36
PKP4-204ENST00000421462 SMCPP49901 116 aaPredicted RBP12.83□□□□□ -0.36
PKP4-204ENST00000421462 TMEM78Q5T7P6 136 aa12.83□□□□□ -0.36
PKP4-204ENST00000421462 PLEKHB2Q96CS7 222 aa12.83□□□□□ -0.36
PKP4-204ENST00000421462 SRSF8Q9BRL6 282 aaKnown RBP12.83□□□□□ -0.36
PKP4-204ENST00000421462 GATA3P23771 443 aa12.82□□□□□ -0.36
PKP4-204ENST00000421462 PRADC1Q9BSG0 188 aa12.82□□□□□ -0.36
PKP4-204ENST00000421462 OTOGLQ3ZCN5 2332 aa12.82□□□□□ -0.36
PKP4-204ENST00000421462 CTSGP08311 255 aa12.82□□□□□ -0.36
PKP4-204ENST00000421462 C3orf36Q3SXR2 165 aa12.82□□□□□ -0.36
PKP4-204ENST00000421462 AGPAT4-IT1Q9H0P7 198 aa12.82□□□□□ -0.36
PKP4-204ENST00000421462 F8VRH5 84 aa12.82□□□□□ -0.36
PKP4-204ENST00000421462 H7C1H1 209 aa12.82□□□□□ -0.36
PKP4-204ENST00000421462 MGPP08493 103 aa12.82□□□□□ -0.36
PKP4-204ENST00000421462 LGALS1P09382 135 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms