RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 GAGE12GP0CL81 117 aa6.23□□□□□ -1.41
HMGXB4-202ENST00000418170 GAGE12IP0CL82 117 aa6.23□□□□□ -1.41
HMGXB4-202ENST00000418170 NDUFV3P56181 108 aaKnown RBP6.23□□□□□ -1.41
HMGXB4-202ENST00000418170 GAGE4Q13068 117 aa6.23□□□□□ -1.41
HMGXB4-202ENST00000418170 C9orf106Q8NAJ2 232 aa6.23□□□□□ -1.41
HMGXB4-202ENST00000418170 FBXL15Q9H469 300 aa6.23□□□□□ -1.41
HMGXB4-202ENST00000418170 SIGLEC9Q9Y336 463 aa6.23□□□□□ -1.41
HMGXB4-202ENST00000418170 IGHV1-46P01743 117 aa6.23□□□□□ -1.41
HMGXB4-202ENST00000418170 CD7P09564 240 aa6.23□□□□□ -1.41
HMGXB4-202ENST00000418170 ANKRD29Q8N6D5 301 aa6.23□□□□□ -1.41
HMGXB4-202ENST00000418170 IGHV3-72A0A0B4J1Y9 119 aa6.23□□□□□ -1.41
HMGXB4-202ENST00000418170 EFNA4P52798 201 aa6.23□□□□□ -1.41
HMGXB4-202ENST00000418170 OR11H6Q8NGC7 330 aa6.23□□□□□ -1.41
HMGXB4-202ENST00000418170 Q8TAT8 98 aa6.23□□□□□ -1.41
HMGXB4-202ENST00000418170 RAXQ9Y2V3 346 aa6.23□□□□□ -1.41
HMGXB4-202ENST00000418170 ORM1P02763 201 aa6.23□□□□□ -1.41
HMGXB4-202ENST00000418170 CNTFRP26992 372 aa6.23□□□□□ -1.41
HMGXB4-202ENST00000418170 NRACQ8N912 160 aa6.23□□□□□ -1.41
HMGXB4-202ENST00000418170 AJUBAQ96IF1 538 aa6.23□□□□□ -1.41
HMGXB4-202ENST00000418170 FCN3O75636 299 aa6.22□□□□□ -1.41
HMGXB4-202ENST00000418170 ASIPP42127 132 aa6.22□□□□□ -1.41
HMGXB4-202ENST00000418170 GAGE2BQ13066 116 aa6.22□□□□□ -1.41
HMGXB4-202ENST00000418170 GAGE2EQ4V326 116 aa6.22□□□□□ -1.41
HMGXB4-202ENST00000418170 PIP4P1Q86T03 277 aa6.22□□□□□ -1.41
HMGXB4-202ENST00000418170 SMIM20Q8N5G0 67 aa6.22□□□□□ -1.41
HMGXB4-202ENST00000418170 RAX2Q96IS3 184 aa6.22□□□□□ -1.41
HMGXB4-202ENST00000418170 GAGE2DQ9UEU5 116 aa6.22□□□□□ -1.41
HMGXB4-202ENST00000418170 SVEP1Q4LDE5 3571 aa6.22□□□□□ -1.41
HMGXB4-202ENST00000418170 FABP5P3A8MUU1 101 aa6.22□□□□□ -1.41
HMGXB4-202ENST00000418170 K7EIM0 57 aa6.22□□□□□ -1.41
HMGXB4-202ENST00000418170 PPP1R27Q86WC6 154 aa6.22□□□□□ -1.41
HMGXB4-202ENST00000418170 PLCE1Q9P212 2302 aa6.22□□□□□ -1.41
HMGXB4-202ENST00000418170 CCDC179H3BU77 68 aa6.22□□□□□ -1.41
HMGXB4-202ENST00000418170 NDUFA11Q86Y39 141 aa6.22□□□□□ -1.41
HMGXB4-202ENST00000418170 MALRD1Q5VYJ5 2156 aa6.22□□□□□ -1.41
HMGXB4-202ENST00000418170 M0R1B8 84 aa6.21□□□□□ -1.41
HMGXB4-202ENST00000418170 SRSF9Q13242 221 aaKnown RBP eCLIP6.21□□□□□ -1.41
HMGXB4-202ENST00000418170 IL17RELQ6ZVW7 336 aa6.21□□□□□ -1.41
HMGXB4-202ENST00000418170 PRADC1Q9BSG0 188 aa6.21□□□□□ -1.41
HMGXB4-202ENST00000418170 CTSZQ9UBR2 303 aa6.21□□□□□ -1.41
HMGXB4-202ENST00000418170 ZNF815PA8K554 130 aa6.21□□□□□ -1.42
HMGXB4-202ENST00000418170 SRSF8Q9BRL6 282 aaKnown RBP6.21□□□□□ -1.42
HMGXB4-202ENST00000418170 ZDBF2Q9HCK1 2354 aa6.21□□□□□ -1.42
HMGXB4-202ENST00000418170 H3BVH4 76 aa6.21□□□□□ -1.42
HMGXB4-202ENST00000418170 M0QXV9 152 aa6.21□□□□□ -1.42
HMGXB4-202ENST00000418170 SNCGO76070 127 aa6.21□□□□□ -1.42
HMGXB4-202ENST00000418170 CNIH1O95406 144 aa6.21□□□□□ -1.42
HMGXB4-202ENST00000418170 IGHG3P01860 377 aa6.21□□□□□ -1.42
HMGXB4-202ENST00000418170 ZNF672Q499Z4 452 aaPredicted RBP6.21□□□□□ -1.42
HMGXB4-202ENST00000418170 PLA2G2CQ5R387 149 aa6.21□□□□□ -1.42
HMGXB4-202ENST00000418170 SCGB1D4Q6XE38 83 aa6.21□□□□□ -1.42
HMGXB4-202ENST00000418170 PLEKHB2Q96CS7 222 aa6.21□□□□□ -1.42
HMGXB4-202ENST00000418170 CENPVL3A0A0U1RRI6 287 aa6.2□□□□□ -1.42
HMGXB4-202ENST00000418170 TRGV3P03979 118 aa6.2□□□□□ -1.42
HMGXB4-202ENST00000418170 IFITM1P13164 125 aa6.2□□□□□ -1.42
HMGXB4-202ENST00000418170 COX6B1P14854 86 aa6.2□□□□□ -1.42
HMGXB4-202ENST00000418170 ANXA2RQ3ZCQ2 193 aa6.2□□□□□ -1.42
HMGXB4-202ENST00000418170 Q6Q795 121 aa6.2□□□□□ -1.42
HMGXB4-202ENST00000418170 NEXN-AS1Q8NBZ9 246 aa6.2□□□□□ -1.42
HMGXB4-202ENST00000418170 TRAV4A0A0B4J268 109 aa6.2□□□□□ -1.42
HMGXB4-202ENST00000418170 TTC32Q5I0X7 151 aa6.2□□□□□ -1.42
HMGXB4-202ENST00000418170 VKORC1Q9BQB6 163 aa6.2□□□□□ -1.42
HMGXB4-202ENST00000418170 SPANXA1Q9NS26 97 aa6.2□□□□□ -1.42
HMGXB4-202ENST00000418170 TNFRSF18Q9Y5U5 241 aa6.2□□□□□ -1.42
HMGXB4-202ENST00000418170 TRAV26-2A0A0B4J265 109 aa6.19□□□□□ -1.42
HMGXB4-202ENST00000418170 IGHG4P01861 327 aa6.19□□□□□ -1.42
HMGXB4-202ENST00000418170 SCGB1C2P0DMR2 95 aa6.19□□□□□ -1.42
HMGXB4-202ENST00000418170 SLC25A20O43772 301 aa6.19□□□□□ -1.42
HMGXB4-202ENST00000418170 CRLF1O75462 422 aa6.19□□□□□ -1.42
HMGXB4-202ENST00000418170 BRI3O95415 125 aa6.19□□□□□ -1.42
HMGXB4-202ENST00000418170 DLX6P56179 175 aa6.19□□□□□ -1.42
HMGXB4-202ENST00000418170 C10orf126Q8N4M7 172 aa6.19□□□□□ -1.42
HMGXB4-202ENST00000418170 SCGB3A1Q96QR1 104 aa6.19□□□□□ -1.42
HMGXB4-202ENST00000418170 CSMD1Q96PZ7 3565 aa6.19□□□□□ -1.42
HMGXB4-202ENST00000418170 TRAV8-2A0A0B4J237 113 aa6.19□□□□□ -1.42
HMGXB4-202ENST00000418170 SLC25A16P16260 332 aa6.19□□□□□ -1.42
HMGXB4-202ENST00000418170 RPL7P18124 248 aaKnown RBP6.19□□□□□ -1.42
HMGXB4-202ENST00000418170 TOMM6Q96B49 74 aa6.19□□□□□ -1.42
HMGXB4-202ENST00000418170 CDX4O14627 284 aaPredicted RBP6.18□□□□□ -1.42
HMGXB4-202ENST00000418170 CFC1BP0CG36 223 aa6.18□□□□□ -1.42
HMGXB4-202ENST00000418170 CFC1P0CG37 223 aa6.18□□□□□ -1.42
HMGXB4-202ENST00000418170 PRTN3P24158 256 aa6.18□□□□□ -1.42
HMGXB4-202ENST00000418170 C1orf210Q8IVY1 113 aa6.18□□□□□ -1.42
HMGXB4-202ENST00000418170 SMIM2Q9BVW6 85 aa6.18□□□□□ -1.42
HMGXB4-202ENST00000418170 RAB1BQ9H0U4 201 aa6.18□□□□□ -1.42
HMGXB4-202ENST00000418170 IGHV1-8P0DP01 117 aa6.18□□□□□ -1.42
HMGXB4-202ENST00000418170 ZNF474Q6S9Z5 364 aaPredicted RBP6.18□□□□□ -1.42
HMGXB4-202ENST00000418170 RASL10AQ92737 203 aa6.18□□□□□ -1.42
HMGXB4-202ENST00000418170 A0A0J9YY99 117 aa6.18□□□□□ -1.42
HMGXB4-202ENST00000418170 TGFAP01135 160 aa6.18□□□□□ -1.42
HMGXB4-202ENST00000418170 CCL8P80075 99 aa6.18□□□□□ -1.42
HMGXB4-202ENST00000418170 ERCC8Q13216 396 aa6.18□□□□□ -1.42
HMGXB4-202ENST00000418170 C3orf36Q3SXR2 165 aa6.18□□□□□ -1.42
HMGXB4-202ENST00000418170 ORMDL2Q53FV1 153 aa6.18□□□□□ -1.42
HMGXB4-202ENST00000418170 CFHR4Q92496 578 aa6.18□□□□□ -1.42
HMGXB4-202ENST00000418170 ITPR1Q14643 2758 aa6.18□□□□□ -1.42
HMGXB4-202ENST00000418170 IGKV3D-20A0A0C4DH25 116 aa6.17□□□□□ -1.42
HMGXB4-202ENST00000418170 NCOR1O75376 2440 aa6.17□□□□□ -1.42
HMGXB4-202ENST00000418170 HLA-DMBP28068 263 aa6.17□□□□□ -1.42
HMGXB4-202ENST00000418170 TMEM155Q4W5P6 130 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms