RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 MRPS12O15235 138 aaKnown RBP2.84□□□□□ -1.95
HMGB3P20-201ENST00000417997 TCF21O43680 179 aa2.84□□□□□ -1.95
HMGB3P20-201ENST00000417997 TCRAP04437 139 aa2.84□□□□□ -1.95
HMGB3P20-201ENST00000417997 CT45A10P0DMU9 189 aa2.84□□□□□ -1.95
HMGB3P20-201ENST00000417997 FLI1Q01543 452 aaPredicted RBP2.84□□□□□ -1.95
HMGB3P20-201ENST00000417997 TMEM183BQ1AE95 376 aa2.84□□□□□ -1.95
HMGB3P20-201ENST00000417997 IBA57Q5T440 356 aaKnown RBP2.84□□□□□ -1.95
HMGB3P20-201ENST00000417997 PRR27Q6MZM9 219 aa2.84□□□□□ -1.95
HMGB3P20-201ENST00000417997 C10orf99Q6UWK7 81 aa2.84□□□□□ -1.95
HMGB3P20-201ENST00000417997 GOLT1AQ6ZVE7 132 aa2.84□□□□□ -1.95
HMGB3P20-201ENST00000417997 Q71RC1 249 aaPredicted RBP2.84□□□□□ -1.95
HMGB3P20-201ENST00000417997 SH2D6Q7Z4S9 175 aa2.84□□□□□ -1.95
HMGB3P20-201ENST00000417997 PRNTQ86SH4 94 aa2.84□□□□□ -1.95
HMGB3P20-201ENST00000417997 Q86TA4 180 aa2.84□□□□□ -1.95
HMGB3P20-201ENST00000417997 BAGE2Q86Y30 109 aa2.84□□□□□ -1.95
HMGB3P20-201ENST00000417997 Q8N2B8 174 aa2.84□□□□□ -1.95
HMGB3P20-201ENST00000417997 FAM24BQ8N5W8 94 aa2.84□□□□□ -1.95
HMGB3P20-201ENST00000417997 TMEM75Q8N9X5 138 aa2.84□□□□□ -1.95
HMGB3P20-201ENST00000417997 NHLRC2Q8NBF2 726 aa2.84□□□□□ -1.95
HMGB3P20-201ENST00000417997 KLHL30-AS1Q8NEE0 82 aa2.84□□□□□ -1.95
HMGB3P20-201ENST00000417997 OR10G8Q8NGN5 311 aa2.84□□□□□ -1.95
HMGB3P20-201ENST00000417997 DYNLRB2Q8TF09 96 aa2.84□□□□□ -1.95
HMGB3P20-201ENST00000417997 SMIM12Q96EX1 92 aa2.84□□□□□ -1.95
HMGB3P20-201ENST00000417997 SFRP2Q96HF1 295 aa2.84□□□□□ -1.95
HMGB3P20-201ENST00000417997 ZNF414Q96IQ9 312 aa2.84□□□□□ -1.95
HMGB3P20-201ENST00000417997 BTF3L4Q96K17 158 aa2.84□□□□□ -1.95
HMGB3P20-201ENST00000417997 UBE2E2Q96LR5 201 aa2.84□□□□□ -1.95
HMGB3P20-201ENST00000417997 IGF2BP2-AS1Q96M15 143 aa2.84□□□□□ -1.95
HMGB3P20-201ENST00000417997 SMR3AQ99954 134 aa2.84□□□□□ -1.95
HMGB3P20-201ENST00000417997 NDFIP1Q9BT67 221 aa2.84□□□□□ -1.95
HMGB3P20-201ENST00000417997 TUBA4BQ9H853 241 aa2.84□□□□□ -1.95
HMGB3P20-201ENST00000417997 ESM1Q9NQ30 184 aa2.84□□□□□ -1.95
HMGB3P20-201ENST00000417997 DAZ1Q9NQZ3 744 aaKnown RBP2.84□□□□□ -1.95
HMGB3P20-201ENST00000417997 URGCP-MRPS24S4R325 110 aa2.84□□□□□ -1.95
HMGB3P20-201ENST00000417997 USP9XQ93008 2570 aaPredicted RBP2.84□□□□□ -1.96
HMGB3P20-201ENST00000417997 TRBV20OR9-2A0A075B6H5 130 aa2.83□□□□□ -1.96
HMGB3P20-201ENST00000417997 IGKV3-7A0A075B6H7 116 aa2.83□□□□□ -1.96
HMGB3P20-201ENST00000417997 IGKV2-40A0A087WW87 121 aaPredicted RBP2.83□□□□□ -1.96
HMGB3P20-201ENST00000417997 IGHV7-4-1A0A0J9YVY3 117 aa2.83□□□□□ -1.96
HMGB3P20-201ENST00000417997 A0A1W2PPQ1 181 aa2.83□□□□□ -1.96
HMGB3P20-201ENST00000417997 CLPSL1A2RUU4 121 aa2.83□□□□□ -1.96
HMGB3P20-201ENST00000417997 ZNF705GA8MUZ8 300 aaPredicted RBP2.83□□□□□ -1.96
HMGB3P20-201ENST00000417997 C1orf196B1AJZ1 125 aa2.83□□□□□ -1.96
HMGB3P20-201ENST00000417997 LINC01619G3V211 115 aa2.83□□□□□ -1.96
HMGB3P20-201ENST00000417997 K7EMT4 169 aa2.83□□□□□ -1.96
HMGB3P20-201ENST00000417997 M0R3E3 92 aa2.83□□□□□ -1.96
HMGB3P20-201ENST00000417997 ISLRO14498 428 aa2.83□□□□□ -1.96
HMGB3P20-201ENST00000417997 CHEK1O14757 476 aa2.83□□□□□ -1.96
HMGB3P20-201ENST00000417997 GATCO43716 136 aaKnown RBP2.83□□□□□ -1.96
HMGB3P20-201ENST00000417997 IGKV2D-40P01614 121 aaPredicted RBP2.83□□□□□ -1.96
HMGB3P20-201ENST00000417997 MYCNOSP40205 109 aa2.83□□□□□ -1.96
HMGB3P20-201ENST00000417997 ID1P41134 155 aa2.83□□□□□ -1.96
HMGB3P20-201ENST00000417997 RPS10P46783 165 aaKnown RBP2.83□□□□□ -1.96
HMGB3P20-201ENST00000417997 SYNJ2BPP57105 145 aa2.83□□□□□ -1.96
HMGB3P20-201ENST00000417997 RAB5BP61020 215 aa2.83□□□□□ -1.96
HMGB3P20-201ENST00000417997 OR5I1Q13606 314 aa2.83□□□□□ -1.96
HMGB3P20-201ENST00000417997 PSG3Q16557 428 aa2.83□□□□□ -1.96
HMGB3P20-201ENST00000417997 DEFB136Q30KP8 78 aa2.83□□□□□ -1.96
HMGB3P20-201ENST00000417997 SAMD13Q5VXD3 122 aa2.83□□□□□ -1.96
HMGB3P20-201ENST00000417997 UNQ9165/PRO28630Q6UXU0 137 aa2.83□□□□□ -1.96
HMGB3P20-201ENST00000417997 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.83□□□□□ -1.96
HMGB3P20-201ENST00000417997 TCF24Q7RTU0 167 aa2.83□□□□□ -1.96
HMGB3P20-201ENST00000417997 GPHB5Q86YW7 130 aa2.83□□□□□ -1.96
HMGB3P20-201ENST00000417997 ZNF738Q8NE65 137 aa2.83□□□□□ -1.96
HMGB3P20-201ENST00000417997 OCC1Q8TAD7 63 aa2.83□□□□□ -1.96
HMGB3P20-201ENST00000417997 MYOZ3Q8TDC0 251 aa2.83□□□□□ -1.96
HMGB3P20-201ENST00000417997 C4orf3Q8WVX3 66 aa2.83□□□□□ -1.96
HMGB3P20-201ENST00000417997 MRPL53Q96EL3 112 aaKnown RBP2.83□□□□□ -1.96
HMGB3P20-201ENST00000417997 RHPN1-AS1Q9BWJ2 59 aa2.83□□□□□ -1.96
HMGB3P20-201ENST00000417997 ZNF331Q9NQX6 463 aaPredicted RBP2.83□□□□□ -1.96
HMGB3P20-201ENST00000417997 OSTCQ9NRP0 149 aa2.83□□□□□ -1.96
HMGB3P20-201ENST00000417997 TMEM242Q9NWH2 141 aa2.83□□□□□ -1.96
HMGB3P20-201ENST00000417997 CLEC5AQ9NY25 188 aa2.83□□□□□ -1.96
HMGB3P20-201ENST00000417997 MLXQ9UH92 298 aa2.83□□□□□ -1.96
HMGB3P20-201ENST00000417997 PSG8Q9UQ74 426 aa2.83□□□□□ -1.96
HMGB3P20-201ENST00000417997 ZFYVE26Q68DK2 2539 aa2.82□□□□□ -1.96
HMGB3P20-201ENST00000417997 MYO18BQ8IUG5 2567 aa2.82□□□□□ -1.96
HMGB3P20-201ENST00000417997 FBN2P35556 2912 aa2.82□□□□□ -1.96
HMGB3P20-201ENST00000417997 TRAV8-1A0A0A6YYK1 113 aa2.82□□□□□ -1.96
HMGB3P20-201ENST00000417997 TGIF2-C20orf24A0A0A6YYL0 155 aa2.82□□□□□ -1.96
HMGB3P20-201ENST00000417997 TRBV6-1A0A0K0K1D8 114 aa2.82□□□□□ -1.96
HMGB3P20-201ENST00000417997 A8MWP6 167 aa2.82□□□□□ -1.96
HMGB3P20-201ENST00000417997 K7EN84 100 aa2.82□□□□□ -1.96
HMGB3P20-201ENST00000417997 LGALS9O00182 355 aa2.82□□□□□ -1.96
HMGB3P20-201ENST00000417997 NDUFA7O95182 113 aa2.82□□□□□ -1.96
HMGB3P20-201ENST00000417997 GCGP01275 180 aa2.82□□□□□ -1.96
HMGB3P20-201ENST00000417997 LTAP01374 205 aa2.82□□□□□ -1.96
HMGB3P20-201ENST00000417997 P01737 135 aa2.82□□□□□ -1.96
HMGB3P20-201ENST00000417997 VPREB1P12018 145 aa2.82□□□□□ -1.96
HMGB3P20-201ENST00000417997 RAB5AP20339 215 aa2.82□□□□□ -1.96
HMGB3P20-201ENST00000417997 HLA-DMBP28068 263 aa2.82□□□□□ -1.96
HMGB3P20-201ENST00000417997 CDX1P47902 265 aaPredicted RBP2.82□□□□□ -1.96
HMGB3P20-201ENST00000417997 TFPI2P48307 235 aa2.82□□□□□ -1.96
HMGB3P20-201ENST00000417997 ELOBQ15370 118 aa2.82□□□□□ -1.96
HMGB3P20-201ENST00000417997 SAPCD1Q5SSQ6 148 aa2.82□□□□□ -1.96
HMGB3P20-201ENST00000417997 TMEM78Q5T7P6 136 aa2.82□□□□□ -1.96
HMGB3P20-201ENST00000417997 TMEM183AQ8IXX5 376 aa2.82□□□□□ -1.96
HMGB3P20-201ENST00000417997 RNF182Q8N6D2 247 aa2.82□□□□□ -1.96
HMGB3P20-201ENST00000417997 ARL6IP6Q8N6S5 226 aa2.82□□□□□ -1.96
HMGB3P20-201ENST00000417997 MAPKAPK5-AS1Q8N8E1 139 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms