RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 SIVA1O15304 175 aa10□□□□□ -0.81
MCF2L-210ENST00000409954 ZNF266Q14584 549 aa10□□□□□ -0.81
MCF2L-210ENST00000409954 MRPL23Q16540 153 aaKnown RBP10□□□□□ -0.81
MCF2L-210ENST00000409954 TP53TG3Q9ULZ0 132 aa10□□□□□ -0.81
MCF2L-210ENST00000409954 MPC2O95563 127 aa9.99□□□□□ -0.81
MCF2L-210ENST00000409954 H2BFSP57053 126 aa9.99□□□□□ -0.81
MCF2L-210ENST00000409954 IFITM3Q01628 133 aa9.99□□□□□ -0.81
MCF2L-210ENST00000409954 ZNF415Q09FC8 603 aa9.99□□□□□ -0.81
MCF2L-210ENST00000409954 FFAR4Q5NUL3 377 aa9.99□□□□□ -0.81
MCF2L-210ENST00000409954 SPATA12Q7Z6I5 190 aa9.99□□□□□ -0.81
MCF2L-210ENST00000409954 IQCF2Q8IXL9 164 aa9.99□□□□□ -0.81
MCF2L-210ENST00000409954 ARL6IP6Q8N6S5 226 aa9.99□□□□□ -0.81
MCF2L-210ENST00000409954 TMED6Q8WW62 240 aa9.99□□□□□ -0.81
MCF2L-210ENST00000409954 PHYHIPLQ96FC7 376 aa9.99□□□□□ -0.81
MCF2L-210ENST00000409954 SPXQ9BT56 116 aa9.99□□□□□ -0.81
MCF2L-210ENST00000409954 KRTAP1-5Q9BYS1 174 aa9.99□□□□□ -0.81
MCF2L-210ENST00000409954 HSPB11Q9Y547 144 aa9.99□□□□□ -0.81
MCF2L-210ENST00000409954 SSNA1O43805 119 aa9.98□□□□□ -0.81
MCF2L-210ENST00000409954 RPL12P30050 165 aaKnown RBP9.98□□□□□ -0.81
MCF2L-210ENST00000409954 CRYBA4P53673 196 aa9.98□□□□□ -0.81
MCF2L-210ENST00000409954 DEFA1P59665 94 aa9.98□□□□□ -0.81
MCF2L-210ENST00000409954 DEFA3P59666 94 aa9.98□□□□□ -0.81
MCF2L-210ENST00000409954 FHL2Q14192 279 aa9.98□□□□□ -0.81
MCF2L-210ENST00000409954 KHDC3LQ587J8 217 aa9.98□□□□□ -0.81
MCF2L-210ENST00000409954 FAM74A1Q5RGS3 127 aa9.98□□□□□ -0.81
MCF2L-210ENST00000409954 PRR9Q5T870 116 aa9.98□□□□□ -0.81
MCF2L-210ENST00000409954 FAM159AQ6UWV7 190 aa9.98□□□□□ -0.81
MCF2L-210ENST00000409954 TRAV9-2A0A087WT02 112 aa9.97□□□□□ -0.81
MCF2L-210ENST00000409954 A6NHS1 94 aa9.97□□□□□ -0.81
MCF2L-210ENST00000409954 DIRC3C9JPN6 131 aa9.97□□□□□ -0.81
MCF2L-210ENST00000409954 UBE2L3P68036 154 aaKnown RBP9.97□□□□□ -0.81
MCF2L-210ENST00000409954 Q6AWC8 147 aa9.97□□□□□ -0.81
MCF2L-210ENST00000409954 Q6ZQT7 251 aa9.97□□□□□ -0.81
MCF2L-210ENST00000409954 NEGR1Q7Z3B1 354 aa9.97□□□□□ -0.81
MCF2L-210ENST00000409954 RASL10AQ92737 203 aa9.97□□□□□ -0.81
MCF2L-210ENST00000409954 MRPL16Q9NX20 251 aaKnown RBP9.97□□□□□ -0.81
MCF2L-210ENST00000409954 TRGV11A0A075B6L2 103 aa9.96□□□□□ -0.82
MCF2L-210ENST00000409954 A0A1W2PPV4 95 aa9.96□□□□□ -0.82
MCF2L-210ENST00000409954 PGPA6NDG6 321 aa9.96□□□□□ -0.82
MCF2L-210ENST00000409954 K7EP13 123 aa9.96□□□□□ -0.82
MCF2L-210ENST00000409954 IGHV3-53P01767 116 aa9.96□□□□□ -0.82
MCF2L-210ENST00000409954 ACOT6Q3I5F7 207 aaPredicted RBP9.96□□□□□ -0.82
MCF2L-210ENST00000409954 LYPD5Q6UWN5 251 aa9.96□□□□□ -0.82
MCF2L-210ENST00000409954 Q8TAT8 98 aa9.96□□□□□ -0.82
MCF2L-210ENST00000409954 CMTM2Q8TAZ6 248 aa9.96□□□□□ -0.82
MCF2L-210ENST00000409954 OTORQ9NRC9 128 aa9.96□□□□□ -0.82
MCF2L-210ENST00000409954 PGPEP1Q9NXJ5 209 aa9.96□□□□□ -0.82
MCF2L-210ENST00000409954 PTTG2Q9NZH5 202 aa9.96□□□□□ -0.82
MCF2L-210ENST00000409954 MDFICQ9P1T7 246 aa9.96□□□□□ -0.82
MCF2L-210ENST00000409954 MBD2Q9UBB5 411 aa9.96□□□□□ -0.82
MCF2L-210ENST00000409954 TRGV4A0A0C4DH28 118 aa9.95□□□□□ -0.82
MCF2L-210ENST00000409954 EREGO14944 169 aa9.95□□□□□ -0.82
MCF2L-210ENST00000409954 NXPH4O95158 308 aa9.95□□□□□ -0.82
MCF2L-210ENST00000409954 TDRG1Q3Y452 100 aa9.95□□□□□ -0.82
MCF2L-210ENST00000409954 MUC21Q5SSG8 566 aa9.95□□□□□ -0.82
MCF2L-210ENST00000409954 PQLC2Q6ZP29 291 aa9.95□□□□□ -0.82
MCF2L-210ENST00000409954 NFE4Q86UQ8 179 aa9.95□□□□□ -0.82
MCF2L-210ENST00000409954 HYLS1Q96M11 299 aa9.95□□□□□ -0.82
MCF2L-210ENST00000409954 C8orf49Q96NF6 230 aa9.95□□□□□ -0.82
MCF2L-210ENST00000409954 ORM1P02763 201 aa9.94□□□□□ -0.82
MCF2L-210ENST00000409954 LINC00315P59091 139 aa9.94□□□□□ -0.82
MCF2L-210ENST00000409954 MAPKAPK5-AS1Q8N8E1 139 aa9.94□□□□□ -0.82
MCF2L-210ENST00000409954 OR10G4Q8NGN3 311 aa9.94□□□□□ -0.82
MCF2L-210ENST00000409954 PCLOQ9Y6V0 5065 aa9.93□□□□□ -0.82
MCF2L-210ENST00000409954 TMEM183BQ1AE95 376 aa9.93□□□□□ -0.82
MCF2L-210ENST00000409954 TMEM183AQ8IXX5 376 aa9.93□□□□□ -0.82
MCF2L-210ENST00000409954 KRTAP4-5Q9BYR2 181 aa9.93□□□□□ -0.82
MCF2L-210ENST00000409954 SMIM3Q9BZL3 60 aa9.93□□□□□ -0.82
MCF2L-210ENST00000409954 TRAV21A0A0B4J279 112 aa9.92□□□□□ -0.82
MCF2L-210ENST00000409954 SRIP30626 198 aa9.92□□□□□ -0.82
MCF2L-210ENST00000409954 Q8N1X5 172 aa9.92□□□□□ -0.82
MCF2L-210ENST00000409954 PCNPQ8WW12 178 aaKnown RBP9.92□□□□□ -0.82
MCF2L-210ENST00000409954 ZNF479Q96JC4 524 aa9.92□□□□□ -0.82
MCF2L-210ENST00000409954 KCNS1Q96KK3 526 aa9.92□□□□□ -0.82
MCF2L-210ENST00000409954 K7EQD1 137 aa9.91□□□□□ -0.82
MCF2L-210ENST00000409954 M0R2P5 195 aa9.91□□□□□ -0.82
MCF2L-210ENST00000409954 KRTAP10-2P60368 255 aa9.91□□□□□ -0.82
MCF2L-210ENST00000409954 Q6ZRN7 208 aaPredicted RBP9.91□□□□□ -0.82
MCF2L-210ENST00000409954 SH2D6Q7Z4S9 175 aa9.91□□□□□ -0.82
MCF2L-210ENST00000409954 OR4C5Q8NGB2 326 aa9.91□□□□□ -0.82
MCF2L-210ENST00000409954 OR10G9Q8NGN4 311 aa9.91□□□□□ -0.82
MCF2L-210ENST00000409954 OR10G7Q8NGN6 311 aa9.91□□□□□ -0.82
MCF2L-210ENST00000409954 TXNDC17Q9BRA2 123 aa9.91□□□□□ -0.82
MCF2L-210ENST00000409954 WFDC1Q9HC57 220 aa9.91□□□□□ -0.82
MCF2L-210ENST00000409954 TREM1Q9NP99 234 aa9.91□□□□□ -0.82
MCF2L-210ENST00000409954 LY96Q9Y6Y9 160 aa9.91□□□□□ -0.82
MCF2L-210ENST00000409954 TRAV4A0A0B4J268 109 aa9.9□□□□□ -0.82
MCF2L-210ENST00000409954 SERTM2A0A1B0GWG4 89 aa9.9□□□□□ -0.82
MCF2L-210ENST00000409954 C9JCJ5 164 aa9.9□□□□□ -0.82
MCF2L-210ENST00000409954 GNRH2O43555 120 aa9.9□□□□□ -0.82
MCF2L-210ENST00000409954 CIDEAO60543 219 aa9.9□□□□□ -0.82
MCF2L-210ENST00000409954 SFTA3P0C7M3 94 aa9.9□□□□□ -0.82
MCF2L-210ENST00000409954 GYPEP15421 78 aa9.9□□□□□ -0.82
MCF2L-210ENST00000409954 EVI2AP22794 236 aa9.9□□□□□ -0.82
MCF2L-210ENST00000409954 GOLT1AQ6ZVE7 132 aa9.9□□□□□ -0.82
MCF2L-210ENST00000409954 BOLA1Q9Y3E2 137 aa9.9□□□□□ -0.82
MCF2L-210ENST00000409954 RYR1P21817 5038 aa9.9□□□□□ -0.83
MCF2L-210ENST00000409954 ERVFC1-1P60608 527 aa9.89□□□□□ -0.83
MCF2L-210ENST00000409954 SDF2L1Q9HCN8 221 aa9.89□□□□□ -0.83
MCF2L-210ENST00000409954 NAGKQ9UJ70 344 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms