RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 OR1A1Q9P1Q5 309 aa3.53□□□□□ -1.84
SF3B1-202ENST00000409915 KAAG1Q9UBP8 84 aa3.53□□□□□ -1.84
SF3B1-202ENST00000409915 CKLFQ9UBR5 152 aa3.53□□□□□ -1.84
SF3B1-202ENST00000409915 RPUSD1Q9UJJ7 312 aaKnown RBP3.53□□□□□ -1.84
SF3B1-202ENST00000409915 ATRQ13535 2644 aa3.53□□□□□ -1.84
SF3B1-202ENST00000409915 ANK2Q01484 3957 aa3.53□□□□□ -1.85
SF3B1-202ENST00000409915 IGLV5-37A0A075B6J1 123 aa3.52□□□□□ -1.85
SF3B1-202ENST00000409915 A0A0G2JLM5 398 aa3.52□□□□□ -1.85
SF3B1-202ENST00000409915 LOC100131303A0A0U1RQF7 123 aa3.52□□□□□ -1.85
SF3B1-202ENST00000409915 TINCRA0A1B0GVN0 87 aa3.52□□□□□ -1.85
SF3B1-202ENST00000409915 C2orf70A6NJV1 201 aa3.52□□□□□ -1.85
SF3B1-202ENST00000409915 F6UB75 175 aa3.52□□□□□ -1.85
SF3B1-202ENST00000409915 ZNF737O75373 536 aa3.52□□□□□ -1.85
SF3B1-202ENST00000409915 OR2H2O95918 312 aa3.52□□□□□ -1.85
SF3B1-202ENST00000409915 IGHV4-59P01825 116 aa3.52□□□□□ -1.85
SF3B1-202ENST00000409915 SPINK8P0C7L1 97 aa3.52□□□□□ -1.85
SF3B1-202ENST00000409915 RBMY1CP0DJD4 496 aa3.52□□□□□ -1.85
SF3B1-202ENST00000409915 CT45A10P0DMU9 189 aa3.52□□□□□ -1.85
SF3B1-202ENST00000409915 SUB1P53999 127 aaKnown RBP eCLIP3.52□□□□□ -1.85
SF3B1-202ENST00000409915 MFAP2P55001 183 aa3.52□□□□□ -1.85
SF3B1-202ENST00000409915 EDDM3BP56851 147 aa3.52□□□□□ -1.85
SF3B1-202ENST00000409915 QRFPP83859 136 aa3.52□□□□□ -1.85
SF3B1-202ENST00000409915 SERF2P84101 59 aa3.52□□□□□ -1.85
SF3B1-202ENST00000409915 PAX8Q06710 450 aa3.52□□□□□ -1.85
SF3B1-202ENST00000409915 ZNF146Q15072 292 aa3.52□□□□□ -1.85
SF3B1-202ENST00000409915 GLIPR1L1Q6UWM5 242 aa3.52□□□□□ -1.85
SF3B1-202ENST00000409915 Q6ZUT4 128 aa3.52□□□□□ -1.85
SF3B1-202ENST00000409915 TCF23Q7RTU1 214 aa3.52□□□□□ -1.85
SF3B1-202ENST00000409915 VMO1Q7Z5L0 202 aa3.52□□□□□ -1.85
SF3B1-202ENST00000409915 BAGE3Q86Y29 109 aa3.52□□□□□ -1.85
SF3B1-202ENST00000409915 BAGE2Q86Y30 109 aa3.52□□□□□ -1.85
SF3B1-202ENST00000409915 MKXQ8IYA7 352 aa3.52□□□□□ -1.85
SF3B1-202ENST00000409915 Q8IYB0 196 aa3.52□□□□□ -1.85
SF3B1-202ENST00000409915 OR1L1Q8NH94 360 aa3.52□□□□□ -1.85
SF3B1-202ENST00000409915 ARPC1AQ92747 370 aa3.52□□□□□ -1.85
SF3B1-202ENST00000409915 VGLL1Q99990 258 aa3.52□□□□□ -1.85
SF3B1-202ENST00000409915 C19orf24Q9BVV8 132 aa3.52□□□□□ -1.85
SF3B1-202ENST00000409915 GNB4Q9HAV0 340 aa3.52□□□□□ -1.85
SF3B1-202ENST00000409915 ZNF257Q9Y2Q1 563 aa3.52□□□□□ -1.85
SF3B1-202ENST00000409915 KLF12Q9Y4X4 402 aa3.52□□□□□ -1.85
SF3B1-202ENST00000409915 SPCS1Q9Y6A9 102 aa3.52□□□□□ -1.85
SF3B1-202ENST00000409915 LY96Q9Y6Y9 160 aa3.52□□□□□ -1.85
SF3B1-202ENST00000409915 KIAA2026Q5HYC2 2103 aa3.52□□□□□ -1.85
SF3B1-202ENST00000409915 MEIS3P1A6NDR6 274 aa3.51□□□□□ -1.85
SF3B1-202ENST00000409915 CRYM-AS1A6NIL9 109 aa3.51□□□□□ -1.85
SF3B1-202ENST00000409915 LINC01548A6NM66 108 aa3.51□□□□□ -1.85
SF3B1-202ENST00000409915 COX8AP10176 69 aa3.51□□□□□ -1.85
SF3B1-202ENST00000409915 HIST1H1EP10412 219 aaKnown RBP3.51□□□□□ -1.85
SF3B1-202ENST00000409915 FABP2P12104 132 aa3.51□□□□□ -1.85
SF3B1-202ENST00000409915 GATA2P23769 480 aaPredicted RBP3.51□□□□□ -1.85
SF3B1-202ENST00000409915 COX7A1P24310 79 aa3.51□□□□□ -1.85
SF3B1-202ENST00000409915 HRH1P35367 487 aa3.51□□□□□ -1.85
SF3B1-202ENST00000409915 DLX6P56179 175 aa3.51□□□□□ -1.85
SF3B1-202ENST00000409915 MEF2CQ06413 473 aaPredicted RBP3.51□□□□□ -1.85
SF3B1-202ENST00000409915 ZNF726P1Q15940 193 aa3.51□□□□□ -1.85
SF3B1-202ENST00000409915 Q6AWC8 147 aa3.51□□□□□ -1.85
SF3B1-202ENST00000409915 Q6P435 159 aa3.51□□□□□ -1.85
SF3B1-202ENST00000409915 C2orf91Q6ZV80 131 aa3.51□□□□□ -1.85
SF3B1-202ENST00000409915 TRAPPC6BQ86SZ2 158 aa3.51□□□□□ -1.85
SF3B1-202ENST00000409915 PPP1R27Q86WC6 154 aa3.51□□□□□ -1.85
SF3B1-202ENST00000409915 Q8N7P7 452 aa3.51□□□□□ -1.85
SF3B1-202ENST00000409915 LY6G5BQ8NDX9 201 aa3.51□□□□□ -1.85
SF3B1-202ENST00000409915 TAF15Q92804 592 aaKnown RBP eCLIP3.51□□□□□ -1.85
SF3B1-202ENST00000409915 C1orf147Q96MC9 270 aaPredicted RBP3.51□□□□□ -1.85
SF3B1-202ENST00000409915 AP1S3Q96PC3 154 aa3.51□□□□□ -1.85
SF3B1-202ENST00000409915 TXNDC17Q9BRA2 123 aa3.51□□□□□ -1.85
SF3B1-202ENST00000409915 SPANXDQ9BXN6 97 aa3.51□□□□□ -1.85
SF3B1-202ENST00000409915 SMIM3Q9BZL3 60 aa3.51□□□□□ -1.85
SF3B1-202ENST00000409915 TNFRSF19Q9NS68 423 aa3.51□□□□□ -1.85
SF3B1-202ENST00000409915 MDFICQ9P1T7 246 aa3.51□□□□□ -1.85
SF3B1-202ENST00000409915 PRO0461Q9UI25 63 aa3.51□□□□□ -1.85
SF3B1-202ENST00000409915 ANXA10Q9UJ72 324 aa3.51□□□□□ -1.85
SF3B1-202ENST00000409915 DOCK11Q5JSL3 2073 aa3.5□□□□□ -1.85
SF3B1-202ENST00000409915 IGHV1-69DA0A0B4J2H0 117 aa3.5□□□□□ -1.85
SF3B1-202ENST00000409915 DNAJC9-AS1A6NH13 148 aa3.5□□□□□ -1.85
SF3B1-202ENST00000409915 SYS1-DBNDD2H3BUS1 97 aa3.5□□□□□ -1.85
SF3B1-202ENST00000409915 SOCS1O15524 211 aa3.5□□□□□ -1.85
SF3B1-202ENST00000409915 OR7C1O76099 320 aaPredicted RBP3.5□□□□□ -1.85
SF3B1-202ENST00000409915 MOSP00540 346 aa3.5□□□□□ -1.85
SF3B1-202ENST00000409915 TSHBP01222 138 aa3.5□□□□□ -1.85
SF3B1-202ENST00000409915 IGHV1-69P01742 117 aa3.5□□□□□ -1.85
SF3B1-202ENST00000409915 PRTN3P24158 256 aa3.5□□□□□ -1.85
SF3B1-202ENST00000409915 UBE2E1P51965 193 aa3.5□□□□□ -1.85
SF3B1-202ENST00000409915 RBM11P57052 281 aaKnown RBP3.5□□□□□ -1.85
SF3B1-202ENST00000409915 UBE2G1P62253 170 aa3.5□□□□□ -1.85
SF3B1-202ENST00000409915 DEFB112Q30KQ8 113 aa3.5□□□□□ -1.85
SF3B1-202ENST00000409915 KRTAP24-1Q3LI83 254 aa3.5□□□□□ -1.85
SF3B1-202ENST00000409915 PSMG4Q5JS54 123 aa3.5□□□□□ -1.85
SF3B1-202ENST00000409915 LINC00242Q5T6M2 205 aa3.5□□□□□ -1.85
SF3B1-202ENST00000409915 HCP5Q6MZN7 132 aa3.5□□□□□ -1.85
SF3B1-202ENST00000409915 RASL11AQ6T310 242 aa3.5□□□□□ -1.85
SF3B1-202ENST00000409915 OSR2Q8N2R0 312 aa3.5□□□□□ -1.85
SF3B1-202ENST00000409915 ZNF439Q8NDP4 499 aa3.5□□□□□ -1.85
SF3B1-202ENST00000409915 OR13A1Q8NGR1 328 aa3.5□□□□□ -1.85
SF3B1-202ENST00000409915 UBALD1Q8TB05 177 aa3.5□□□□□ -1.85
SF3B1-202ENST00000409915 TSKUQ8WUA8 353 aa3.5□□□□□ -1.85
SF3B1-202ENST00000409915 GTSF1Q8WW33 167 aa3.5□□□□□ -1.85
SF3B1-202ENST00000409915 RTN4IP1Q8WWV3 396 aaPredicted RBP3.5□□□□□ -1.85
SF3B1-202ENST00000409915 DDB2Q92466 427 aa3.5□□□□□ -1.85
SF3B1-202ENST00000409915 BORCS7Q96B45 105 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms