RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 SORL1Q92673 2214 aa3.13□□□□□ -1.91
HMGB3P19-201ENST00000403971 ATRQ13535 2644 aa3.12□□□□□ -1.91
HMGB3P19-201ENST00000403971 IGKV1OR2-108A0A075B7D4 117 aa3.12□□□□□ -1.91
HMGB3P19-201ENST00000403971 UBE2L5PA0A1B0GUS4 154 aa3.12□□□□□ -1.91
HMGB3P19-201ENST00000403971 TCRBV4S1A1TA0A5B7 111 aa3.12□□□□□ -1.91
HMGB3P19-201ENST00000403971 SMCO3A2RU48 225 aa3.12□□□□□ -1.91
HMGB3P19-201ENST00000403971 CLPSL1A2RUU4 121 aa3.12□□□□□ -1.91
HMGB3P19-201ENST00000403971 UMAD1C9J7I0 102 aa3.12□□□□□ -1.91
HMGB3P19-201ENST00000403971 TGOLN2O43493 480 aa3.12□□□□□ -1.91
HMGB3P19-201ENST00000403971 GNG7O60262 68 aa3.12□□□□□ -1.91
HMGB3P19-201ENST00000403971 IFNA7P01567 189 aa3.12□□□□□ -1.91
HMGB3P19-201ENST00000403971 MBP02144 154 aa3.12□□□□□ -1.91
HMGB3P19-201ENST00000403971 PRH1P02810 166 aa3.12□□□□□ -1.91
HMGB3P19-201ENST00000403971 FGF7P21781 194 aa3.12□□□□□ -1.91
HMGB3P19-201ENST00000403971 ATP6V0CP27449 155 aa3.12□□□□□ -1.91
HMGB3P19-201ENST00000403971 SULT1A2P50226 295 aa3.12□□□□□ -1.91
HMGB3P19-201ENST00000403971 RAB5CP51148 216 aa3.12□□□□□ -1.91
HMGB3P19-201ENST00000403971 TPPP2P59282 170 aa3.12□□□□□ -1.91
HMGB3P19-201ENST00000403971 PLP1P60201 277 aa3.12□□□□□ -1.91
HMGB3P19-201ENST00000403971 YPEL3P61236 119 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P19-201ENST00000403971 RUNX1Q01196 453 aa3.12□□□□□ -1.91
HMGB3P19-201ENST00000403971 ATP5G2Q06055 141 aa3.12□□□□□ -1.91
HMGB3P19-201ENST00000403971 C6orf226Q5I0X4 101 aa3.12□□□□□ -1.91
HMGB3P19-201ENST00000403971 TEX261Q6UWH6 196 aa3.12□□□□□ -1.91
HMGB3P19-201ENST00000403971 C19orf35Q6ZS72 473 aa3.12□□□□□ -1.91
HMGB3P19-201ENST00000403971 CYP2G1PQ6ZSU1 146 aa3.12□□□□□ -1.91
HMGB3P19-201ENST00000403971 ZNF767PQ75MW2 155 aa3.12□□□□□ -1.91
HMGB3P19-201ENST00000403971 ZNF680Q8NEM1 530 aa3.12□□□□□ -1.91
HMGB3P19-201ENST00000403971 OR4X2Q8NGF9 303 aa3.12□□□□□ -1.91
HMGB3P19-201ENST00000403971 LRRC20Q8TCA0 184 aa3.12□□□□□ -1.91
HMGB3P19-201ENST00000403971 EEF1AKMT3Q96AZ1 226 aa3.12□□□□□ -1.91
HMGB3P19-201ENST00000403971 ACY3Q96HD9 319 aa3.12□□□□□ -1.91
HMGB3P19-201ENST00000403971 MGST2Q99735 147 aa3.12□□□□□ -1.91
HMGB3P19-201ENST00000403971 GGTLC1Q9BX51 225 aa3.12□□□□□ -1.91
HMGB3P19-201ENST00000403971 NPCDR1Q9BY65 106 aa3.12□□□□□ -1.91
HMGB3P19-201ENST00000403971 ZNF355PQ9NSJ1 428 aa3.12□□□□□ -1.91
HMGB3P19-201ENST00000403971 MRPL36Q9P0J6 103 aaKnown RBP3.12□□□□□ -1.91
HMGB3P19-201ENST00000403971 XCL2Q9UBD3 114 aa3.12□□□□□ -1.91
HMGB3P19-201ENST00000403971 LINC00527Q9UJ94 153 aa3.12□□□□□ -1.91
HMGB3P19-201ENST00000403971 IGKV1D-37A0A075B6S9 117 aa3.11□□□□□ -1.91
HMGB3P19-201ENST00000403971 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.11□□□□□ -1.91
HMGB3P19-201ENST00000403971 C11orf94C9JXX5 98 aa3.11□□□□□ -1.91
HMGB3P19-201ENST00000403971 NUPL2O15504 423 aaKnown RBP3.11□□□□□ -1.91
HMGB3P19-201ENST00000403971 IGKV1-17P01599 117 aa3.11□□□□□ -1.91
HMGB3P19-201ENST00000403971 CTSGP08311 255 aa3.11□□□□□ -1.91
HMGB3P19-201ENST00000403971 LGALS1P09382 135 aaKnown RBP3.11□□□□□ -1.91
HMGB3P19-201ENST00000403971 LINC00869P0C866 280 aa3.11□□□□□ -1.91
HMGB3P19-201ENST00000403971 OR10J1P30954 320 aa3.11□□□□□ -1.91
HMGB3P19-201ENST00000403971 S100A7P31151 101 aa3.11□□□□□ -1.91
HMGB3P19-201ENST00000403971 NMUP48645 174 aa3.11□□□□□ -1.91
HMGB3P19-201ENST00000403971 FGF8P55075 233 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P19-201ENST00000403971 IFITM2Q01629 132 aa3.11□□□□□ -1.91
HMGB3P19-201ENST00000403971 ZNF616Q08AN1 781 aa3.11□□□□□ -1.91
HMGB3P19-201ENST00000403971 Q56UQ5 140 aa3.11□□□□□ -1.91
HMGB3P19-201ENST00000403971 DPPA3Q6W0C5 159 aa3.11□□□□□ -1.91
HMGB3P19-201ENST00000403971 S100A7AQ86SG5 101 aa3.11□□□□□ -1.91
HMGB3P19-201ENST00000403971 HSD17B11Q8NBQ5 300 aa3.11□□□□□ -1.91
HMGB3P19-201ENST00000403971 BPIFCQ8NFQ6 507 aa3.11□□□□□ -1.91
HMGB3P19-201ENST00000403971 Q8WTZ3 238 aa3.11□□□□□ -1.91
HMGB3P19-201ENST00000403971 PFDN5Q99471 154 aa3.11□□□□□ -1.91
HMGB3P19-201ENST00000403971 RSG1Q9BU20 258 aa3.11□□□□□ -1.91
HMGB3P19-201ENST00000403971 PEF1Q9UBV8 284 aaKnown RBP3.11□□□□□ -1.91
HMGB3P19-201ENST00000403971 PXMP4Q9Y6I8 212 aa3.11□□□□□ -1.91
HMGB3P19-201ENST00000403971 IGHV3-21A0A0B4J1V1 117 aa3.1□□□□□ -1.91
HMGB3P19-201ENST00000403971 OR2T8A6NH00 312 aa3.1□□□□□ -1.91
HMGB3P19-201ENST00000403971 SEC14L6B5MCN3 397 aa3.1□□□□□ -1.91
HMGB3P19-201ENST00000403971 I3L521 148 aa3.1□□□□□ -1.91
HMGB3P19-201ENST00000403971 K7EMT4 169 aa3.1□□□□□ -1.91
HMGB3P19-201ENST00000403971 NDUFA4O00483 81 aa3.1□□□□□ -1.91
HMGB3P19-201ENST00000403971 GGCTO75223 188 aaKnown RBP3.1□□□□□ -1.91
HMGB3P19-201ENST00000403971 YIF1AO95070 293 aa3.1□□□□□ -1.91
HMGB3P19-201ENST00000403971 RD3LP0DJH9 198 aa3.1□□□□□ -1.91
HMGB3P19-201ENST00000403971 M6PRP20645 277 aa3.1□□□□□ -1.91
HMGB3P19-201ENST00000403971 B2MP61769 119 aa3.1□□□□□ -1.91
HMGB3P19-201ENST00000403971 ZNF90Q03938 601 aa3.1□□□□□ -1.91
HMGB3P19-201ENST00000403971 GUCA2BQ16661 112 aa3.1□□□□□ -1.91
HMGB3P19-201ENST00000403971 ACOT6Q3I5F7 207 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P19-201ENST00000403971 AKR1C8PQ5T2L2 129 aa3.1□□□□□ -1.91
HMGB3P19-201ENST00000403971 MIC13Q5XKP0 118 aa3.1□□□□□ -1.91
HMGB3P19-201ENST00000403971 C10orf99Q6UWK7 81 aa3.1□□□□□ -1.91
HMGB3P19-201ENST00000403971 CLEC19AQ6UXS0 136 aa3.1□□□□□ -1.91
HMGB3P19-201ENST00000403971 GPHB5Q86YW7 130 aa3.1□□□□□ -1.91
HMGB3P19-201ENST00000403971 OR10G9Q8NGN4 311 aa3.1□□□□□ -1.91
HMGB3P19-201ENST00000403971 C4orf3Q8WVX3 66 aa3.1□□□□□ -1.91
HMGB3P19-201ENST00000403971 MRPL32Q9BYC8 188 aaKnown RBP3.1□□□□□ -1.91
HMGB3P19-201ENST00000403971 SH3BGRL3Q9H299 93 aa3.1□□□□□ -1.91
HMGB3P19-201ENST00000403971 RPRMQ9NS64 109 aa3.1□□□□□ -1.91
HMGB3P19-201ENST00000403971 SLC39A9Q9NUM3 307 aa3.1□□□□□ -1.91
HMGB3P19-201ENST00000403971 PRO0461Q9UI25 63 aa3.1□□□□□ -1.91
HMGB3P19-201ENST00000403971 KLK12Q9UKR0 248 aa3.1□□□□□ -1.91
HMGB3P19-201ENST00000403971 TSSC4Q9Y5U2 329 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P19-201ENST00000403971 TRAV1-1A0A0B4J248 108 aa3.09□□□□□ -1.91
HMGB3P19-201ENST00000403971 CTXND1A0A1B0GTU2 59 aa3.09□□□□□ -1.91
HMGB3P19-201ENST00000403971 A8MWP6 167 aa3.09□□□□□ -1.91
HMGB3P19-201ENST00000403971 TEX46H3BTG2 121 aa3.09□□□□□ -1.91
HMGB3P19-201ENST00000403971 LGALS9O00182 355 aa3.09□□□□□ -1.91
HMGB3P19-201ENST00000403971 HYPMO75409 117 aa3.09□□□□□ -1.91
HMGB3P19-201ENST00000403971 IGHV3-11P01762 117 aa3.09□□□□□ -1.91
HMGB3P19-201ENST00000403971 HBE1P02100 147 aa3.09□□□□□ -1.91
HMGB3P19-201ENST00000403971 NMBP08949 121 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms