RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 FN1P02751 2386 aaKnown RBP19.22■□□□□ 0.67
CPNE1-205ENST00000401607 FABP5P3A8MUU1 101 aa19.21■□□□□ 0.67
CPNE1-205ENST00000401607 ZNF688P0C7X2 276 aa19.21■□□□□ 0.67
CPNE1-205ENST00000401607 COX19Q49B96 90 aa19.21■□□□□ 0.67
CPNE1-205ENST00000401607 WDR73Q6P4I2 378 aa19.21■□□□□ 0.67
CPNE1-205ENST00000401607 MRPL18Q9H0U6 180 aaKnown RBP19.21■□□□□ 0.67
CPNE1-205ENST00000401607 A0A1B0GXF2 115 aa19.21■□□□□ 0.67
CPNE1-205ENST00000401607 ADARB2-AS1A8MUL3 147 aa19.21■□□□□ 0.67
CPNE1-205ENST00000401607 NDUFA6P56556 154 aa19.21■□□□□ 0.67
CPNE1-205ENST00000401607 RASL11AQ6T310 242 aa19.21■□□□□ 0.67
CPNE1-205ENST00000401607 ATP5L2Q7Z4Y8 100 aa19.21■□□□□ 0.67
CPNE1-205ENST00000401607 FAM19A4Q96LR4 140 aa19.21■□□□□ 0.67
CPNE1-205ENST00000401607 PSMG4Q5JS54 123 aa19.2■□□□□ 0.66
CPNE1-205ENST00000401607 PRR9Q5T870 116 aa19.2■□□□□ 0.66
CPNE1-205ENST00000401607 TMSB15BA0A087X1C1 80 aa19.19■□□□□ 0.66
CPNE1-205ENST00000401607 KRTAP10-3P60369 221 aa19.19■□□□□ 0.66
CPNE1-205ENST00000401607 GDF5OSQ5U4N7 250 aa19.19■□□□□ 0.66
CPNE1-205ENST00000401607 ZNF575Q86XF7 245 aa19.19■□□□□ 0.66
CPNE1-205ENST00000401607 MT-ND6P03923 174 aa19.19■□□□□ 0.66
CPNE1-205ENST00000401607 SNRPD3P62318 126 aaKnown RBP19.19■□□□□ 0.66
CPNE1-205ENST00000401607 ZFAND2AQ8N6M9 145 aa19.19■□□□□ 0.66
CPNE1-205ENST00000401607 NSD1Q96L73 2696 aaPredicted RBP19.18■□□□□ 0.66
CPNE1-205ENST00000401607 UBE2CO00762 179 aa19.18■□□□□ 0.66
CPNE1-205ENST00000401607 RAB4BP61018 213 aa19.17■□□□□ 0.66
CPNE1-205ENST00000401607 PAFAH1B2P68402 229 aa19.17■□□□□ 0.66
CPNE1-205ENST00000401607 TMEM61Q8N0U2 210 aa19.17■□□□□ 0.66
CPNE1-205ENST00000401607 HLA-DQA1P01909 254 aa19.16■□□□□ 0.66
CPNE1-205ENST00000401607 DEFB114Q30KQ6 69 aa19.16■□□□□ 0.66
CPNE1-205ENST00000401607 LINC01559Q495D7 138 aa19.16■□□□□ 0.66
CPNE1-205ENST00000401607 DYNLRB2Q8TF09 96 aa19.16■□□□□ 0.66
CPNE1-205ENST00000401607 C11orf21Q9P2W6 132 aa19.16■□□□□ 0.66
CPNE1-205ENST00000401607 XKRY2A2RUG3 117 aa19.16■□□□□ 0.66
CPNE1-205ENST00000401607 RPS20P60866 119 aaKnown RBP19.16■□□□□ 0.66
CPNE1-205ENST00000401607 ORM1P02763 201 aa19.15■□□□□ 0.66
CPNE1-205ENST00000401607 CAMPP49913 170 aa19.15■□□□□ 0.66
CPNE1-205ENST00000401607 HBBP68871 147 aa19.15■□□□□ 0.66
CPNE1-205ENST00000401607 Q6ZQT7 251 aa19.15■□□□□ 0.66
CPNE1-205ENST00000401607 TRBV7-9A0A0J9YWB2 115 aa19.14■□□□□ 0.66
CPNE1-205ENST00000401607 Q6AWC8 147 aa19.14■□□□□ 0.66
CPNE1-205ENST00000401607 APRG1Q8IVJ8 170 aa19.14■□□□□ 0.66
CPNE1-205ENST00000401607 TRAV2A0A0B4J234 112 aa19.14■□□□□ 0.65
CPNE1-205ENST00000401607 IGKV3D-20A0A0C4DH25 116 aa19.14■□□□□ 0.65
CPNE1-205ENST00000401607 ARMS2P0C7Q2 107 aa19.14■□□□□ 0.65
CPNE1-205ENST00000401607 CRISP2P16562 243 aa19.14■□□□□ 0.65
CPNE1-205ENST00000401607 CD33P20138 364 aa19.14■□□□□ 0.65
CPNE1-205ENST00000401607 HOXA5P20719 270 aa19.14■□□□□ 0.65
CPNE1-205ENST00000401607 A0A0J9YX75 114 aa19.13■□□□□ 0.65
CPNE1-205ENST00000401607 J3KRW8 73 aa19.13■□□□□ 0.65
CPNE1-205ENST00000401607 NSUN5P1Q3KNT7 163 aa19.13■□□□□ 0.65
CPNE1-205ENST00000401607 IGLC6P0CF74 106 aa19.12■□□□□ 0.65
CPNE1-205ENST00000401607 SLAQ13239 276 aa19.12■□□□□ 0.65
CPNE1-205ENST00000401607 CD300EQ496F6 205 aaPredicted RBP19.12■□□□□ 0.65
CPNE1-205ENST00000401607 A0A1B0GUT8 65 aa19.11■□□□□ 0.65
CPNE1-205ENST00000401607 GFI1BQ5VTD9 330 aa19.11■□□□□ 0.65
CPNE1-205ENST00000401607 LYZL1Q6UWQ5 148 aa19.11■□□□□ 0.65
CPNE1-205ENST00000401607 TPPP3Q9BW30 176 aa19.11■□□□□ 0.65
CPNE1-205ENST00000401607 SIGLEC8Q9NYZ4 499 aa19.11■□□□□ 0.65
CPNE1-205ENST00000401607 KIR3DS1Q14943 382 aa19.11■□□□□ 0.65
CPNE1-205ENST00000401607 COA6Q5JTJ3 125 aaKnown RBP19.11■□□□□ 0.65
CPNE1-205ENST00000401607 SSBP4Q9BWG4 385 aaPredicted RBP19.11■□□□□ 0.65
CPNE1-205ENST00000401607 GRIFINA4D1Z8 144 aa19.1■□□□□ 0.65
CPNE1-205ENST00000401607 APCSP02743 223 aa19.1■□□□□ 0.65
CPNE1-205ENST00000401607 KIAA1644Q3SXP7 199 aa19.1■□□□□ 0.65
CPNE1-205ENST00000401607 SETXQ7Z333 2677 aaKnown RBP19.09■□□□□ 0.65
CPNE1-205ENST00000401607 GPX1P07203 203 aa19.09■□□□□ 0.65
CPNE1-205ENST00000401607 CTRLP40313 264 aa19.09■□□□□ 0.65
CPNE1-205ENST00000401607 NDUFA11Q86Y39 141 aa19.09■□□□□ 0.65
CPNE1-205ENST00000401607 FER1L6-AS1Q8NA97 138 aa19.09■□□□□ 0.65
CPNE1-205ENST00000401607 A0A1B0GUS0 222 aa19.09■□□□□ 0.65
CPNE1-205ENST00000401607 CYSRT1A8MQ03 144 aa19.09■□□□□ 0.65
CPNE1-205ENST00000401607 KLLNB2CW77 178 aa19.09■□□□□ 0.65
CPNE1-205ENST00000401607 PRR31Q5SQ13 230 aa19.09■□□□□ 0.65
CPNE1-205ENST00000401607 EBLN2Q6P2I7 272 aa19.09■□□□□ 0.65
CPNE1-205ENST00000401607 FOXI2Q6ZQN5 318 aa19.09■□□□□ 0.65
CPNE1-205ENST00000401607 FLNBO75369 2602 aaKnown RBP19.08■□□□□ 0.65
CPNE1-205ENST00000401607 RIGQ13278 110 aa19.08■□□□□ 0.64
CPNE1-205ENST00000401607 ODF3Q96PU9 254 aa19.08■□□□□ 0.64
CPNE1-205ENST00000401607 TRAV21A0A0B4J279 112 aa19.07■□□□□ 0.64
CPNE1-205ENST00000401607 IFITM10A6NMD0 228 aa19.06■□□□□ 0.64
CPNE1-205ENST00000401607 RNASE4P34096 147 aaKnown RBP19.06■□□□□ 0.64
CPNE1-205ENST00000401607 DEFB131AP59861 70 aa19.06■□□□□ 0.64
CPNE1-205ENST00000401607 HIST3H2BBQ8N257 126 aa19.06■□□□□ 0.64
CPNE1-205ENST00000401607 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP19.06■□□□□ 0.64
CPNE1-205ENST00000401607 GATD1Q8NB37 220 aa19.06■□□□□ 0.64
CPNE1-205ENST00000401607 SPAG8Q99932 426 aaPredicted RBP19.06■□□□□ 0.64
CPNE1-205ENST00000401607 TRAV25A0A0B4J276 109 aa19.06■□□□□ 0.64
CPNE1-205ENST00000401607 BORCS7Q96B45 105 aa19.06■□□□□ 0.64
CPNE1-205ENST00000401607 ZNF256Q9Y2P7 627 aaPredicted RBP19.06■□□□□ 0.64
CPNE1-205ENST00000401607 A0A1B0GW15 77 aa19.04■□□□□ 0.64
CPNE1-205ENST00000401607 DUSP14O95147 198 aaKnown RBP19.04■□□□□ 0.64
CPNE1-205ENST00000401607 IGKV3-20P01619 116 aa19.04■□□□□ 0.64
CPNE1-205ENST00000401607 MAP6D1Q9H9H5 199 aa19.04■□□□□ 0.64
CPNE1-205ENST00000401607 MUC21A0A0G2JKD1 596 aa19.04■□□□□ 0.64
CPNE1-205ENST00000401607 MUC21A0A140T8X8 626 aa19.04■□□□□ 0.64
CPNE1-205ENST00000401607 OR4C46A6NHA9 309 aa19.04■□□□□ 0.64
CPNE1-205ENST00000401607 AKR1D1P51857 326 aa19.04■□□□□ 0.64
CPNE1-205ENST00000401607 PDZD11Q5EBL8 140 aa19.04■□□□□ 0.64
CPNE1-205ENST00000401607 MUC21Q5SSG8 566 aa19.04■□□□□ 0.64
CPNE1-205ENST00000401607 TP53TG3Q9ULZ0 132 aa19.04■□□□□ 0.64
CPNE1-205ENST00000401607 KNCNA6PVL3 124 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms