RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 WISP1O95388 367 aa12.84□□□□□ -0.35
ITSN1-209ENST00000399352 RUSC1-AS1Q66K80 236 aa12.84□□□□□ -0.35
ITSN1-209ENST00000399352 NUPR1O60356 82 aa12.84□□□□□ -0.35
ITSN1-209ENST00000399352 C1orf43Q9BWL3 253 aa12.84□□□□□ -0.35
ITSN1-209ENST00000399352 BPESC1Q9GZL8 116 aa12.84□□□□□ -0.35
ITSN1-209ENST00000399352 PRSS29PA6NIE9 313 aa12.83□□□□□ -0.35
ITSN1-209ENST00000399352 BOD1L2Q8IYS8 172 aa12.83□□□□□ -0.35
ITSN1-209ENST00000399352 CASP8AP2Q9UKL3 1982 aa12.83□□□□□ -0.35
ITSN1-209ENST00000399352 COL5A3P25940 1745 aaPredicted RBP12.83□□□□□ -0.36
ITSN1-209ENST00000399352 TRAV13-2A0A0B4J235 113 aa12.83□□□□□ -0.36
ITSN1-209ENST00000399352 DOCK8Q8NF50 2099 aa12.83□□□□□ -0.36
ITSN1-209ENST00000399352 TMEM14CQ9P0S9 112 aa12.83□□□□□ -0.36
ITSN1-209ENST00000399352 K7EMI3 77 aa12.83□□□□□ -0.36
ITSN1-209ENST00000399352 TMEM258P61165 79 aa12.83□□□□□ -0.36
ITSN1-209ENST00000399352 ZNF833PQ6ZTB9 187 aa12.83□□□□□ -0.36
ITSN1-209ENST00000399352 NKAPP1Q8N9T2 125 aa12.83□□□□□ -0.36
ITSN1-209ENST00000399352 TMEM243Q9BU79 118 aa12.83□□□□□ -0.36
ITSN1-209ENST00000399352 KLF5Q13887 457 aaPredicted RBP12.82□□□□□ -0.36
ITSN1-209ENST00000399352 LCTP09848 1927 aa12.82□□□□□ -0.36
ITSN1-209ENST00000399352 MBD3L4A6NDZ8 208 aaPredicted RBP12.82□□□□□ -0.36
ITSN1-209ENST00000399352 MBD3L3A6NE82 208 aaPredicted RBP12.82□□□□□ -0.36
ITSN1-209ENST00000399352 MBD3L5A6NJ08 208 aaPredicted RBP12.82□□□□□ -0.36
ITSN1-209ENST00000399352 CRYGCP07315 174 aa12.82□□□□□ -0.36
ITSN1-209ENST00000399352 WDR86Q86TI4 376 aa12.82□□□□□ -0.36
ITSN1-209ENST00000399352 MBD3L2Q8NHZ7 208 aaPredicted RBP12.82□□□□□ -0.36
ITSN1-209ENST00000399352 WNK3Q9BYP7 1800 aa12.82□□□□□ -0.36
ITSN1-209ENST00000399352 CD59P13987 128 aa12.82□□□□□ -0.36
ITSN1-209ENST00000399352 C17orf58Q2M2W7 97 aa12.82□□□□□ -0.36
ITSN1-209ENST00000399352 RALGAPA2Q2PPJ7 1873 aa12.82□□□□□ -0.36
ITSN1-209ENST00000399352 hADV29S1A0JD25 119 aa12.81□□□□□ -0.36
ITSN1-209ENST00000399352 SHISA9B4DS77 424 aa12.81□□□□□ -0.36
ITSN1-209ENST00000399352 BAALC-AS2P0C853 105 aa12.81□□□□□ -0.36
ITSN1-209ENST00000399352 C17orf77Q96MU5 243 aa12.81□□□□□ -0.36
ITSN1-209ENST00000399352 IGLL5B9A064 214 aa12.81□□□□□ -0.36
ITSN1-209ENST00000399352 IGLC1P0CG04 106 aa12.81□□□□□ -0.36
ITSN1-209ENST00000399352 Q6ZR03 302 aa12.81□□□□□ -0.36
ITSN1-209ENST00000399352 LINC00173Q6ZV60 143 aa12.81□□□□□ -0.36
ITSN1-209ENST00000399352 E7EQL1 145 aa12.81□□□□□ -0.36
ITSN1-209ENST00000399352 ZNF134P52741 427 aa12.81□□□□□ -0.36
ITSN1-209ENST00000399352 PYGO2Q9BRQ0 406 aa12.81□□□□□ -0.36
ITSN1-209ENST00000399352 HOXD3P31249 432 aaPredicted RBP12.8□□□□□ -0.36
ITSN1-209ENST00000399352 CRIPAKQ8N1N5 446 aa12.8□□□□□ -0.36
ITSN1-209ENST00000399352 IL15RAQ13261 267 aa12.8□□□□□ -0.36
ITSN1-209ENST00000399352 C5orf47Q569G3 176 aa12.8□□□□□ -0.36
ITSN1-209ENST00000399352 F5H768 121 aa12.8□□□□□ -0.36
ITSN1-209ENST00000399352 LTAP01374 205 aa12.8□□□□□ -0.36
ITSN1-209ENST00000399352 LYPD6BQ8NI32 183 aa12.8□□□□□ -0.36
ITSN1-209ENST00000399352 VOPP1Q96AW1 172 aa12.8□□□□□ -0.36
ITSN1-209ENST00000399352 GATA1P15976 413 aaPredicted RBP12.8□□□□□ -0.36
ITSN1-209ENST00000399352 TNS1Q9HBL0 1735 aaKnown RBP12.8□□□□□ -0.36
ITSN1-209ENST00000399352 PRR20EP86478 221 aa12.79□□□□□ -0.36
ITSN1-209ENST00000399352 PRR20CP86479 221 aa12.79□□□□□ -0.36
ITSN1-209ENST00000399352 PRR20DP86480 221 aa12.79□□□□□ -0.36
ITSN1-209ENST00000399352 PRR20BP86481 221 aa12.79□□□□□ -0.36
ITSN1-209ENST00000399352 PRR20AP86496 221 aa12.79□□□□□ -0.36
ITSN1-209ENST00000399352 THAP8Q8NA92 274 aa12.79□□□□□ -0.36
ITSN1-209ENST00000399352 C20orf78Q9BR46 151 aa12.79□□□□□ -0.36
ITSN1-209ENST00000399352 PLXNA1Q9UIW2 1896 aa12.79□□□□□ -0.36
ITSN1-209ENST00000399352 SPRY2O43597 315 aa12.79□□□□□ -0.36
ITSN1-209ENST00000399352 DIAPH2-AS1Q14236 149 aa12.79□□□□□ -0.36
ITSN1-209ENST00000399352 ANKRD39Q53RE8 183 aa12.79□□□□□ -0.36
ITSN1-209ENST00000399352 NBL1P41271 181 aa12.79□□□□□ -0.36
ITSN1-209ENST00000399352 DSCR9P59020 149 aa12.79□□□□□ -0.36
ITSN1-209ENST00000399352 COA6Q5JTJ3 125 aaKnown RBP12.78□□□□□ -0.36
ITSN1-209ENST00000399352 ZNF493Q6ZR52 646 aa12.78□□□□□ -0.36
ITSN1-209ENST00000399352 CFHR4Q92496 578 aa12.78□□□□□ -0.36
ITSN1-209ENST00000399352 RIF1Q5UIP0 2472 aaKnown RBP12.78□□□□□ -0.36
ITSN1-209ENST00000399352 PRB2P02812 416 aaPredicted RBP12.78□□□□□ -0.36
ITSN1-209ENST00000399352 HERVK_113P63121 156 aa12.78□□□□□ -0.36
ITSN1-209ENST00000399352 CLPSL2Q6UWE3 100 aa12.78□□□□□ -0.36
ITSN1-209ENST00000399352 RNF166Q96A37 237 aaPredicted RBP12.78□□□□□ -0.36
ITSN1-209ENST00000399352 K7EM74 188 aa12.78□□□□□ -0.36
ITSN1-209ENST00000399352 DEFB121Q5J5C9 76 aa12.78□□□□□ -0.36
ITSN1-209ENST00000399352 E9PQ18 207 aa12.77□□□□□ -0.36
ITSN1-209ENST00000399352 EGR2P11161 476 aaPredicted RBP12.77□□□□□ -0.36
ITSN1-209ENST00000399352 WIPF2Q8TF74 440 aaPredicted RBP12.77□□□□□ -0.36
ITSN1-209ENST00000399352 ZNF524Q96C55 264 aa12.77□□□□□ -0.36
ITSN1-209ENST00000399352 WFDC2Q14508 124 aa12.77□□□□□ -0.37
ITSN1-209ENST00000399352 A0A096LPF7 62 aa12.77□□□□□ -0.37
ITSN1-209ENST00000399352 C15orf65H3BRN8 121 aa12.77□□□□□ -0.37
ITSN1-209ENST00000399352 C3orf56Q8N813 242 aa12.77□□□□□ -0.37
ITSN1-209ENST00000399352 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.76□□□□□ -0.372e-6■■■■■ 29
ITSN1-209ENST00000399352 ZNF503-AS2A6NEH8 195 aa12.76□□□□□ -0.37
ITSN1-209ENST00000399352 Q9H8V8 135 aa12.76□□□□□ -0.37
ITSN1-209ENST00000399352 ARTNQ5T4W7 220 aa12.76□□□□□ -0.37
ITSN1-209ENST00000399352 FOXI2Q6ZQN5 318 aa12.76□□□□□ -0.37
ITSN1-209ENST00000399352 GREB1LQ9C091 1923 aaPredicted RBP12.76□□□□□ -0.37
ITSN1-209ENST00000399352 GNRH2O43555 120 aa12.75□□□□□ -0.37
ITSN1-209ENST00000399352 CR1LQ2VPA4 569 aa12.75□□□□□ -0.37
ITSN1-209ENST00000399352 UBE2E1P51965 193 aa12.75□□□□□ -0.37
ITSN1-209ENST00000399352 CSRP1P21291 193 aaKnown RBP12.75□□□□□ -0.37
ITSN1-209ENST00000399352 DAD1P61803 113 aa12.75□□□□□ -0.37
ITSN1-209ENST00000399352 FOXE3Q13461 319 aa12.75□□□□□ -0.37
ITSN1-209ENST00000399352 DYNAPQ8N1N2 210 aa12.75□□□□□ -0.37
ITSN1-209ENST00000399352 PRSS47A8MTI9 375 aa12.75□□□□□ -0.37
ITSN1-209ENST00000399352 LOXP28300 417 aaPredicted RBP12.75□□□□□ -0.37
ITSN1-209ENST00000399352 NRXN2Q9P2S2 1712 aa12.75□□□□□ -0.37
ITSN1-209ENST00000399352 RSPO1Q2MKA7 263 aaPredicted RBP12.75□□□□□ -0.37
ITSN1-209ENST00000399352 TTTY13Q9BZ97 58 aa12.75□□□□□ -0.37
ITSN1-209ENST00000399352 F6UB75 175 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms