RNA–Protein interactions for RNA: ENST00000397491.6

CHL1-202, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 5,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-202ENST00000397491 H3BRN7 92 aa11.97□□□□□ -0.49
CHL1-202ENST00000397491 TTTY13Q9BZ97 58 aa11.97□□□□□ -0.49
CHL1-202ENST00000397491 SPANXCQ9NY87 97 aa11.97□□□□□ -0.49
CHL1-202ENST00000397491 HAMPP81172 84 aa11.97□□□□□ -0.49
CHL1-202ENST00000397491 RHPN1-AS1Q9BWJ2 59 aa11.97□□□□□ -0.49
CHL1-202ENST00000397491 A0A1W2PRX2 142 aa11.96□□□□□ -0.49
CHL1-202ENST00000397491 C15orf65H3BRN8 121 aa11.96□□□□□ -0.49
CHL1-202ENST00000397491 I3L3M4 83 aa11.96□□□□□ -0.49
CHL1-202ENST00000397491 Q8NFD4 153 aa11.96□□□□□ -0.49
CHL1-202ENST00000397491 THBDP07204 575 aa11.96□□□□□ -0.49
CHL1-202ENST00000397491 C17orf58Q2M2W7 97 aa11.96□□□□□ -0.49
CHL1-202ENST00000397491 ZNF833PQ6ZTB9 187 aa11.96□□□□□ -0.49
CHL1-202ENST00000397491 THAP8Q8NA92 274 aa11.96□□□□□ -0.49
CHL1-202ENST00000397491 ZNF407Q9C0G0 2248 aa11.96□□□□□ -0.5
CHL1-202ENST00000397491 OOSP1A8MZH6 123 aa11.95□□□□□ -0.5
CHL1-202ENST00000397491 SSC4DQ8WTU2 575 aa11.95□□□□□ -0.5
CHL1-202ENST00000397491 C1orf43Q9BWL3 253 aa11.95□□□□□ -0.5
CHL1-202ENST00000397491 NDUFB8O95169 186 aa11.95□□□□□ -0.5
CHL1-202ENST00000397491 PF4P02776 101 aa11.95□□□□□ -0.5
CHL1-202ENST00000397491 SYNJ2BPP57105 145 aa11.95□□□□□ -0.5
CHL1-202ENST00000397491 KNCNA6PVL3 124 aa11.95□□□□□ -0.5
CHL1-202ENST00000397491 K7EM74 188 aa11.95□□□□□ -0.5
CHL1-202ENST00000397491 TPSG1Q9NRR2 321 aa11.95□□□□□ -0.5
CHL1-202ENST00000397491 MINOS1Q5TGZ0 78 aa11.95□□□□□ -0.5
CHL1-202ENST00000397491 MINOS1-NBL1R4GNA1 71 aa11.95□□□□□ -0.5
CHL1-202ENST00000397491 THADAQ6YHU6 1953 aa11.95□□□□□ -0.5
CHL1-202ENST00000397491 DENND4AQ7Z401 1863 aa11.95□□□□□ -0.5
CHL1-202ENST00000397491 C3orf56Q8N813 242 aa11.94□□□□□ -0.5
CHL1-202ENST00000397491 INS-IGF2F8WCM5 200 aa11.94□□□□□ -0.5
CHL1-202ENST00000397491 INSP01308 110 aa11.94□□□□□ -0.5
CHL1-202ENST00000397491 C17orf77Q96MU5 243 aa11.94□□□□□ -0.5
CHL1-202ENST00000397491 TRAV12-1A0A0B4J245 112 aa11.94□□□□□ -0.5
CHL1-202ENST00000397491 TINCRA0A1B0GVN0 87 aa11.94□□□□□ -0.5
CHL1-202ENST00000397491 GATA1P15976 413 aaPredicted RBP11.94□□□□□ -0.5
CHL1-202ENST00000397491 RBX1P62877 108 aa11.94□□□□□ -0.5
CHL1-202ENST00000397491 RBMY1FQ15415 496 aaKnown RBP11.94□□□□□ -0.5
CHL1-202ENST00000397491 ZNF503-AS2A6NEH8 195 aa11.94□□□□□ -0.5
CHL1-202ENST00000397491 DUX4L9Q6RFH8 374 aaPredicted RBP11.94□□□□□ -0.5
CHL1-202ENST00000397491 ZNF493Q6ZR52 646 aa11.94□□□□□ -0.5
CHL1-202ENST00000397491 C20orf78Q9BR46 151 aa11.94□□□□□ -0.5
CHL1-202ENST00000397491 Q6ZR03 302 aa11.94□□□□□ -0.5
CHL1-202ENST00000397491 LYPD6Q86Y78 171 aa11.93□□□□□ -0.5
CHL1-202ENST00000397491 EGR2P11161 476 aaPredicted RBP11.93□□□□□ -0.5
CHL1-202ENST00000397491 RBM3P98179 157 aaKnown RBP11.93□□□□□ -0.5
CHL1-202ENST00000397491 IGF2BP2-AS1Q96M15 143 aa11.93□□□□□ -0.5
CHL1-202ENST00000397491 PFN2P35080 140 aa11.93□□□□□ -0.5
CHL1-202ENST00000397491 YLPM1P49750 1951 aaKnown RBP11.92□□□□□ -0.5
CHL1-202ENST00000397491 FAM236AA0A1B0GUQ0 79 aa11.92□□□□□ -0.5
CHL1-202ENST00000397491 FAM236BA0A1B0GV22 79 aa11.92□□□□□ -0.5
CHL1-202ENST00000397491 PRSS47A8MTI9 375 aa11.92□□□□□ -0.5
CHL1-202ENST00000397491 CR1LQ2VPA4 569 aa11.92□□□□□ -0.5
CHL1-202ENST00000397491 TEX36Q5VZQ5 186 aa11.92□□□□□ -0.5
CHL1-202ENST00000397491 PRSS22Q9GZN4 317 aa11.92□□□□□ -0.5
CHL1-202ENST00000397491 HIGD1BQ9P298 99 aa11.92□□□□□ -0.5
CHL1-202ENST00000397491 ARFGEF3Q5TH69 2177 aa11.91□□□□□ -0.5
CHL1-202ENST00000397491 J3KT08 172 aa11.91□□□□□ -0.5
CHL1-202ENST00000397491 SPATA12Q7Z6I5 190 aa11.91□□□□□ -0.5
CHL1-202ENST00000397491 PCNX2A6NKB5 2137 aa11.91□□□□□ -0.5
CHL1-202ENST00000397491 SHISA9B4DS77 424 aa11.91□□□□□ -0.5
CHL1-202ENST00000397491 OVOL3O00110 214 aa11.91□□□□□ -0.5
CHL1-202ENST00000397491 ACYP1P07311 99 aa11.91□□□□□ -0.5
CHL1-202ENST00000397491 CD59P13987 128 aa11.91□□□□□ -0.5
CHL1-202ENST00000397491 MYO18BQ8IUG5 2567 aa11.9□□□□□ -0.5
CHL1-202ENST00000397491 FAM223BA6NKX1 122 aa11.9□□□□□ -0.5
CHL1-202ENST00000397491 FAM223AQ8IWN6 122 aa11.9□□□□□ -0.5
CHL1-202ENST00000397491 DAZ1Q9NQZ3 744 aaKnown RBP11.9□□□□□ -0.5
CHL1-202ENST00000397491 BAALC-AS2P0C853 105 aa11.9□□□□□ -0.51
CHL1-202ENST00000397491 MRPL23Q16540 153 aaKnown RBP11.9□□□□□ -0.51
CHL1-202ENST00000397491 GTSF1Q8WW33 167 aa11.9□□□□□ -0.51
CHL1-202ENST00000397491 RNF183Q96D59 192 aa11.9□□□□□ -0.51
CHL1-202ENST00000397491 KLK9Q9UKQ9 250 aa11.9□□□□□ -0.51
CHL1-202ENST00000397491 M0R1W7 72 aa11.89□□□□□ -0.51
CHL1-202ENST00000397491 POU2AF1Q16633 256 aa11.89□□□□□ -0.51
CHL1-202ENST00000397491 MSRB2Q9Y3D2 182 aa11.89□□□□□ -0.51
CHL1-202ENST00000397491 MDS2Q8NDY4 140 aa11.89□□□□□ -0.51
CHL1-202ENST00000397491 PLXND1Q9Y4D7 1925 aa11.89□□□□□ -0.51
CHL1-202ENST00000397491 KLHL30-AS1Q8NEE0 82 aa11.89□□□□□ -0.51
CHL1-202ENST00000397491 USMG5Q96IX5 58 aa11.89□□□□□ -0.51
CHL1-202ENST00000397491 PLXNA3P51805 1871 aa11.89□□□□□ -0.51
CHL1-202ENST00000397491 C2orf70A6NJV1 201 aa11.89□□□□□ -0.51
CHL1-202ENST00000397491 DIAPH2-AS1Q14236 149 aa11.88□□□□□ -0.51
CHL1-202ENST00000397491 RNASE13Q5GAN3 156 aaKnown RBP11.88□□□□□ -0.51
CHL1-202ENST00000397491 TSC2P49815 1807 aa11.88□□□□□ -0.51
CHL1-202ENST00000397491 SPINK13Q1W4C9 94 aa11.88□□□□□ -0.51
CHL1-202ENST00000397491 ZNF491Q8N8L2 437 aa11.88□□□□□ -0.51
CHL1-202ENST00000397491 PTH2Q96A98 100 aa11.88□□□□□ -0.51
CHL1-202ENST00000397491 A4D1N5 150 aa11.88□□□□□ -0.51
CHL1-202ENST00000397491 IGHV3-16A0A0C4DH30 117 aa11.87□□□□□ -0.51
CHL1-202ENST00000397491 LINC01620Q4KN68 170 aa11.87□□□□□ -0.51
CHL1-202ENST00000397491 UBE2E2Q96LR5 201 aa11.87□□□□□ -0.51
CHL1-202ENST00000397491 SONP18583 2426 aaKnown RBP11.87□□□□□ -0.51
CHL1-202ENST00000397491 TCF20Q9UGU0 1960 aaKnown RBP11.87□□□□□ -0.51
CHL1-202ENST00000397491 TRAV13-2A0A0B4J235 113 aa11.87□□□□□ -0.51
CHL1-202ENST00000397491 IGHV3-38A0A0C4DH36 116 aa11.87□□□□□ -0.51
CHL1-202ENST00000397491 TMEM258P61165 79 aa11.87□□□□□ -0.51
CHL1-202ENST00000397491 HERV-K104P63124 156 aa11.87□□□□□ -0.51
CHL1-202ENST00000397491 PROK2Q9HC23 129 aa11.87□□□□□ -0.51
CHL1-202ENST00000397491 ATP6V0E1O15342 81 aa11.87□□□□□ -0.51
CHL1-202ENST00000397491 BRD3OSQ6XYD6 125 aa11.87□□□□□ -0.51
CHL1-202ENST00000397491 CFHR4Q92496 578 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms