RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 PRR9Q5T870 116 aa20.35■□□□□ 0.85
CPNE1-203ENST00000397442 V9GYV3 84 aa20.35■□□□□ 0.85
CPNE1-203ENST00000397442 CRISP2P16562 243 aa20.34■□□□□ 0.85
CPNE1-203ENST00000397442 AMTNQ6UX39 209 aa20.34■□□□□ 0.85
CPNE1-203ENST00000397442 OR4B1Q8NGF8 309 aa20.34■□□□□ 0.85
CPNE1-203ENST00000397442 ODF3Q96PU9 254 aa20.34■□□□□ 0.85
CPNE1-203ENST00000397442 H7BYZ3 331 aa20.33■□□□□ 0.85
CPNE1-203ENST00000397442 PPP1R2P9O14990 202 aa20.33■□□□□ 0.85
CPNE1-203ENST00000397442 IGKV3-20P01619 116 aa20.33■□□□□ 0.85
CPNE1-203ENST00000397442 CMC4P56277 68 aaPredicted RBP20.33■□□□□ 0.85
CPNE1-203ENST00000397442 BTN1A1Q13410 526 aa20.33■□□□□ 0.85
CPNE1-203ENST00000397442 C15orf54Q8N8G6 183 aa20.33■□□□□ 0.85
CPNE1-203ENST00000397442 KIR3DS1Q14943 382 aa20.32■□□□□ 0.84
CPNE1-203ENST00000397442 ANK2Q01484 3957 aa20.32■□□□□ 0.84
CPNE1-203ENST00000397442 FAM162BQ5T6X4 162 aa20.32■□□□□ 0.84
CPNE1-203ENST00000397442 SH2D1AO60880 128 aa20.31■□□□□ 0.84
CPNE1-203ENST00000397442 RBMY1BA6NDE4 496 aaKnown RBP20.3■□□□□ 0.84
CPNE1-203ENST00000397442 RBMY1EA6NEQ0 496 aaKnown RBP20.3■□□□□ 0.84
CPNE1-203ENST00000397442 KLLNB2CW77 178 aa20.3■□□□□ 0.84
CPNE1-203ENST00000397442 RBMY1DP0C7P1 496 aaKnown RBP20.3■□□□□ 0.84
CPNE1-203ENST00000397442 WFDC10AQ9H1F0 79 aa20.3■□□□□ 0.84
CPNE1-203ENST00000397442 SMCO4Q9NRQ5 59 aa20.3■□□□□ 0.84
CPNE1-203ENST00000397442 P01737 135 aa20.29■□□□□ 0.84
CPNE1-203ENST00000397442 Q6ZQT7 251 aa20.29■□□□□ 0.84
CPNE1-203ENST00000397442 DAZAP1Q96EP5 407 aaKnown RBP20.29■□□□□ 0.84
CPNE1-203ENST00000397442 PKD1L1Q8TDX9 2849 aa20.29■□□□□ 0.84
CPNE1-203ENST00000397442 ZNF705GA8MUZ8 300 aaPredicted RBP20.29■□□□□ 0.84
CPNE1-203ENST00000397442 J3KRW8 73 aa20.29■□□□□ 0.84
CPNE1-203ENST00000397442 GATCO43716 136 aaKnown RBP20.29■□□□□ 0.84
CPNE1-203ENST00000397442 PRR31Q5SQ13 230 aa20.29■□□□□ 0.84
CPNE1-203ENST00000397442 CXorf65A6NEN9 183 aa20.28■□□□□ 0.84
CPNE1-203ENST00000397442 CA1P00915 261 aaPredicted RBP20.28■□□□□ 0.84
CPNE1-203ENST00000397442 PFN1P07737 140 aaKnown RBP20.28■□□□□ 0.84
CPNE1-203ENST00000397442 CLUHP3Q96NS8 147 aa20.28■□□□□ 0.84
CPNE1-203ENST00000397442 TUBA4BQ9H853 241 aa20.28■□□□□ 0.84
CPNE1-203ENST00000397442 FABP5P3A8MUU1 101 aa20.27■□□□□ 0.84
CPNE1-203ENST00000397442 GPX1P07203 203 aa20.27■□□□□ 0.84
CPNE1-203ENST00000397442 RPP21Q9H633 154 aaKnown RBP20.27■□□□□ 0.84
CPNE1-203ENST00000397442 M0R2Z0 102 aa20.26■□□□□ 0.83
CPNE1-203ENST00000397442 LEPP41159 167 aa20.26■□□□□ 0.83
CPNE1-203ENST00000397442 OXLD1Q5BKU9 147 aa20.26■□□□□ 0.83
CPNE1-203ENST00000397442 YPEL4Q96NS1 127 aa20.26■□□□□ 0.83
CPNE1-203ENST00000397442 SPINK13Q1W4C9 94 aa20.26■□□□□ 0.83
CPNE1-203ENST00000397442 TRPT1Q86TN4 253 aaKnown RBP20.26■□□□□ 0.83
CPNE1-203ENST00000397442 RNASE4P34096 147 aaKnown RBP20.25■□□□□ 0.83
CPNE1-203ENST00000397442 CDKN1BP46527 198 aa20.25■□□□□ 0.83
CPNE1-203ENST00000397442 RPL19P84098 196 aaKnown RBP20.25■□□□□ 0.83
CPNE1-203ENST00000397442 Q6AWC8 147 aa20.25■□□□□ 0.83
CPNE1-203ENST00000397442 IL36BQ9NZH7 164 aa20.25■□□□□ 0.83
CPNE1-203ENST00000397442 C11orf21Q9P2W6 132 aa20.25■□□□□ 0.83
CPNE1-203ENST00000397442 URGCP-MRPS24S4R325 110 aa20.25■□□□□ 0.83
CPNE1-203ENST00000397442 CMYA5Q8N3K9 4069 aa20.25■□□□□ 0.83
CPNE1-203ENST00000397442 CT83Q5H943 113 aa20.24■□□□□ 0.83
CPNE1-203ENST00000397442 STHQ8IWL8 128 aa20.24■□□□□ 0.83
CPNE1-203ENST00000397442 TSPOP30536 169 aa20.23■□□□□ 0.83
CPNE1-203ENST00000397442 GTSCR1Q86UQ5 136 aa20.23■□□□□ 0.83
CPNE1-203ENST00000397442 ZNF575Q86XF7 245 aa20.23■□□□□ 0.83
CPNE1-203ENST00000397442 OR2D3Q8NGH3 330 aa20.23■□□□□ 0.83
CPNE1-203ENST00000397442 IMMP2LQ96T52 175 aa20.23■□□□□ 0.83
CPNE1-203ENST00000397442 TRAV12-2A0A075B6T6 113 aa20.22■□□□□ 0.83
CPNE1-203ENST00000397442 GFI1BQ5VTD9 330 aa20.22■□□□□ 0.83
CPNE1-203ENST00000397442 FXYD7P58549 80 aa20.22■□□□□ 0.83
CPNE1-203ENST00000397442 ELOBQ15370 118 aa20.22■□□□□ 0.83
CPNE1-203ENST00000397442 SMIM27A0A1W2PRY6 76 aa20.21■□□□□ 0.83
CPNE1-203ENST00000397442 CRXO43186 299 aaPredicted RBP20.21■□□□□ 0.83
CPNE1-203ENST00000397442 FAM3BP58499 235 aaPredicted RBP20.21■□□□□ 0.83
CPNE1-203ENST00000397442 DEFB125Q8N687 156 aa20.21■□□□□ 0.83
CPNE1-203ENST00000397442 TSKUQ8WUA8 353 aa20.21■□□□□ 0.83
CPNE1-203ENST00000397442 TRAV21A0A0B4J279 112 aa20.2■□□□□ 0.82
CPNE1-203ENST00000397442 C7orf71A4D174 169 aa20.2■□□□□ 0.82
CPNE1-203ENST00000397442 RIPPLY3P57055 190 aa20.2■□□□□ 0.82
CPNE1-203ENST00000397442 LINC01559Q495D7 138 aa20.2■□□□□ 0.82
CPNE1-203ENST00000397442 Q8N1Y9 231 aa20.2■□□□□ 0.82
CPNE1-203ENST00000397442 IGKV3D-20A0A0C4DH25 116 aa20.19■□□□□ 0.82
CPNE1-203ENST00000397442 ZNF324O75467 553 aaPredicted RBP20.19■□□□□ 0.82
CPNE1-203ENST00000397442 TMEM189A5PLL7 270 aa20.19■□□□□ 0.82
CPNE1-203ENST00000397442 A8MWL6 223 aa20.19■□□□□ 0.82
CPNE1-203ENST00000397442 ORM1P02763 201 aa20.19■□□□□ 0.82
CPNE1-203ENST00000397442 GZMBP10144 247 aa20.19■□□□□ 0.82
CPNE1-203ENST00000397442 GTSF1Q8WW33 167 aa20.19■□□□□ 0.82
CPNE1-203ENST00000397442 TRAV12-3A0A0B4J271 114 aa20.18■□□□□ 0.82
CPNE1-203ENST00000397442 COLCA2A8K830 154 aa20.18■□□□□ 0.82
CPNE1-203ENST00000397442 TCL1AP56279 114 aa20.18■□□□□ 0.82
CPNE1-203ENST00000397442 EGFEM1PQ0D2K5 195 aa20.18■□□□□ 0.82
CPNE1-203ENST00000397442 NEU1Q99519 415 aa20.18■□□□□ 0.82
CPNE1-203ENST00000397442 TMSB15BA0A087X1C1 80 aa20.17■□□□□ 0.82
CPNE1-203ENST00000397442 S100PP25815 95 aa20.16■□□□□ 0.82
CPNE1-203ENST00000397442 KRTAP10-11P60412 298 aa20.16■□□□□ 0.82
CPNE1-203ENST00000397442 KCNIP4Q6PIL6 250 aa20.16■□□□□ 0.82
CPNE1-203ENST00000397442 TGIF2-C20orf24A0A0A6YYL0 155 aa20.16■□□□□ 0.82
CPNE1-203ENST00000397442 CXCL1P09341 107 aa20.16■□□□□ 0.82
CPNE1-203ENST00000397442 RBMY1A1P0DJD3 496 aaKnown RBP20.16■□□□□ 0.82
CPNE1-203ENST00000397442 RBMY1CP0DJD4 496 aa20.16■□□□□ 0.82
CPNE1-203ENST00000397442 RBMY1FQ15415 496 aaKnown RBP20.16■□□□□ 0.82
CPNE1-203ENST00000397442 GFRA4Q9GZZ7 299 aa20.16■□□□□ 0.82
CPNE1-203ENST00000397442 PYGO2Q9BRQ0 406 aa20.15■□□□□ 0.82
CPNE1-203ENST00000397442 A0A1W2PPQ1 181 aa20.14■□□□□ 0.81
CPNE1-203ENST00000397442 FAM231BA6NCW3 169 aa20.14■□□□□ 0.81
CPNE1-203ENST00000397442 HIGD1CA8MV81 97 aa20.14■□□□□ 0.81
CPNE1-203ENST00000397442 TRBV24-1A0A075B6N3 115 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms