RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 Q6AWC8 147 aa14.16□□□□□ -0.14
TSPAN4-204ENST00000397404 Q8TAT8 98 aa14.16□□□□□ -0.14
TSPAN4-204ENST00000397404 RNASE7Q9H1E1 156 aaKnown RBP14.16□□□□□ -0.14
TSPAN4-204ENST00000397404 TRAV21A0A0B4J279 112 aa14.15□□□□□ -0.14
TSPAN4-204ENST00000397404 AMBPP02760 352 aa14.15□□□□□ -0.14
TSPAN4-204ENST00000397404 IZUMO1RA6ND01 250 aa14.14□□□□□ -0.15
TSPAN4-204ENST00000397404 KLLNB2CW77 178 aa14.14□□□□□ -0.15
TSPAN4-204ENST00000397404 H3BMM0 161 aa14.14□□□□□ -0.15
TSPAN4-204ENST00000397404 GPX1P07203 203 aa14.14□□□□□ -0.15
TSPAN4-204ENST00000397404 CDKN1BP46527 198 aa14.14□□□□□ -0.15
TSPAN4-204ENST00000397404 GTSCR1Q86UQ5 136 aa14.14□□□□□ -0.15
TSPAN4-204ENST00000397404 TSKUQ8WUA8 353 aa14.14□□□□□ -0.15
TSPAN4-204ENST00000397404 C8orf49Q96NF6 230 aa14.14□□□□□ -0.15
TSPAN4-204ENST00000397404 TRBV24-1A0A075B6N3 115 aa14.13□□□□□ -0.15
TSPAN4-204ENST00000397404 SCO1O75880 301 aa14.13□□□□□ -0.15
TSPAN4-204ENST00000397404 CXCL1P09341 107 aa14.13□□□□□ -0.15
TSPAN4-204ENST00000397404 NUTF2P61970 127 aaKnown RBP14.13□□□□□ -0.15
TSPAN4-204ENST00000397404 ODF3L2Q3SX64 289 aa14.13□□□□□ -0.15
TSPAN4-204ENST00000397404 PRR31Q5SQ13 230 aa14.13□□□□□ -0.15
TSPAN4-204ENST00000397404 TMEM88Q6PEY1 159 aa14.13□□□□□ -0.15
TSPAN4-204ENST00000397404 ZFAND2AQ8N6M9 145 aa14.13□□□□□ -0.15
TSPAN4-204ENST00000397404 SELENOKQ9Y6D0 94 aa14.13□□□□□ -0.15
TSPAN4-204ENST00000397404 FBN1P35555 2871 aaKnown RBP14.13□□□□□ -0.15
TSPAN4-204ENST00000397404 F6UB75 175 aa14.12□□□□□ -0.15
TSPAN4-204ENST00000397404 CBLN2Q8IUK8 224 aa14.12□□□□□ -0.15
TSPAN4-204ENST00000397404 STHQ8IWL8 128 aa14.12□□□□□ -0.15
TSPAN4-204ENST00000397404 C20orf144Q9BQM9 153 aa14.12□□□□□ -0.15
TSPAN4-204ENST00000397404 NAT8BQ9UHF3 227 aa14.12□□□□□ -0.15
TSPAN4-204ENST00000397404 COL6A5A8TX70 2615 aa14.12□□□□□ -0.15
TSPAN4-204ENST00000397404 SMIM27A0A1W2PRY6 76 aa14.12□□□□□ -0.15
TSPAN4-204ENST00000397404 SH2D1AO60880 128 aa14.12□□□□□ -0.15
TSPAN4-204ENST00000397404 FOXA3P55318 350 aaPredicted RBP14.12□□□□□ -0.15
TSPAN4-204ENST00000397404 LINC01559Q495D7 138 aa14.12□□□□□ -0.15
TSPAN4-204ENST00000397404 COX19Q49B96 90 aa14.12□□□□□ -0.15
TSPAN4-204ENST00000397404 A0A1W2PPQ1 181 aa14.11□□□□□ -0.15
TSPAN4-204ENST00000397404 CRIP1P50238 77 aa14.11□□□□□ -0.15
TSPAN4-204ENST00000397404 ELOBQ15370 118 aa14.11□□□□□ -0.15
TSPAN4-204ENST00000397404 ACTL10Q5JWF8 245 aa14.11□□□□□ -0.15
TSPAN4-204ENST00000397404 TMEM189A5PLL7 270 aa14.1□□□□□ -0.15
TSPAN4-204ENST00000397404 ZNF705DP0CH99 300 aaPredicted RBP14.1□□□□□ -0.15
TSPAN4-204ENST00000397404 ZNF705BP0CI00 300 aaPredicted RBP14.1□□□□□ -0.15
TSPAN4-204ENST00000397404 GDF5OSQ5U4N7 250 aa14.1□□□□□ -0.15
TSPAN4-204ENST00000397404 LINC00322Q6ZN03 302 aaPredicted RBP14.1□□□□□ -0.15
TSPAN4-204ENST00000397404 OR2D3Q8NGH3 330 aa14.1□□□□□ -0.15
TSPAN4-204ENST00000397404 RASL11AQ6T310 242 aa14.09□□□□□ -0.15
TSPAN4-204ENST00000397404 AMTNQ6UX39 209 aa14.09□□□□□ -0.15
TSPAN4-204ENST00000397404 ATP5L2Q7Z4Y8 100 aa14.09□□□□□ -0.15
TSPAN4-204ENST00000397404 KCNS1Q96KK3 526 aa14.09□□□□□ -0.15
TSPAN4-204ENST00000397404 YPEL4Q96NS1 127 aa14.09□□□□□ -0.15
TSPAN4-204ENST00000397404 PYGO2Q9BRQ0 406 aa14.09□□□□□ -0.15
TSPAN4-204ENST00000397404 C7orf71A4D174 169 aa14.08□□□□□ -0.16
TSPAN4-204ENST00000397404 STAB1Q9NY15 2570 aa14.08□□□□□ -0.16
TSPAN4-204ENST00000397404 TYMSP04818 313 aa14.07□□□□□ -0.16
TSPAN4-204ENST00000397404 ZNF80P51504 273 aaPredicted RBP14.07□□□□□ -0.16
TSPAN4-204ENST00000397404 MORN3Q6PF18 240 aaPredicted RBP14.07□□□□□ -0.16
TSPAN4-204ENST00000397404 URGCP-MRPS24S4R325 110 aa14.07□□□□□ -0.16
TSPAN4-204ENST00000397404 SORL1Q92673 2214 aa14.07□□□□□ -0.16
TSPAN4-204ENST00000397404 A0A1B0GW15 77 aa14.06□□□□□ -0.16
TSPAN4-204ENST00000397404 COLCA2A8K830 154 aa14.06□□□□□ -0.16
TSPAN4-204ENST00000397404 ORM1P02763 201 aa14.06□□□□□ -0.16
TSPAN4-204ENST00000397404 RIPPLY3P57055 190 aa14.06□□□□□ -0.16
TSPAN4-204ENST00000397404 TRPT1Q86TN4 253 aaKnown RBP14.06□□□□□ -0.16
TSPAN4-204ENST00000397404 C1QTNF4Q9BXJ3 329 aa14.06□□□□□ -0.16
TSPAN4-204ENST00000397404 C19orf73Q9NVV2 129 aa14.06□□□□□ -0.16
TSPAN4-204ENST00000397404 VWFP04275 2813 aa14.06□□□□□ -0.16
TSPAN4-204ENST00000397404 KNCNA6PVL3 124 aa14.06□□□□□ -0.16
TSPAN4-204ENST00000397404 F2Z2F3 143 aa14.06□□□□□ -0.16
TSPAN4-204ENST00000397404 FAM3BP58499 235 aaPredicted RBP14.06□□□□□ -0.16
TSPAN4-204ENST00000397404 DEFB1P60022 68 aa14.06□□□□□ -0.16
TSPAN4-204ENST00000397404 TDRG1Q3Y452 100 aa14.06□□□□□ -0.16
TSPAN4-204ENST00000397404 BORCS7Q96B45 105 aa14.06□□□□□ -0.16
TSPAN4-204ENST00000397404 FAM210BQ96KR6 192 aa14.06□□□□□ -0.16
TSPAN4-204ENST00000397404 NEU1Q99519 415 aa14.06□□□□□ -0.16
TSPAN4-204ENST00000397404 HIGD1CA8MV81 97 aa14.05□□□□□ -0.16
TSPAN4-204ENST00000397404 S100A8P05109 93 aa14.05□□□□□ -0.16
TSPAN4-204ENST00000397404 RNASE4P34096 147 aaKnown RBP14.05□□□□□ -0.16
TSPAN4-204ENST00000397404 DNLZQ5SXM8 178 aa14.05□□□□□ -0.16
TSPAN4-204ENST00000397404 CD7P09564 240 aa14.04□□□□□ -0.16
TSPAN4-204ENST00000397404 MED14OSP0DP75 135 aa14.04□□□□□ -0.16
TSPAN4-204ENST00000397404 IGLL1P15814 213 aa14.04□□□□□ -0.16
TSPAN4-204ENST00000397404 FAM159AQ6UWV7 190 aa14.04□□□□□ -0.16
TSPAN4-204ENST00000397404 TMEM256Q8N2U0 113 aa14.04□□□□□ -0.16
TSPAN4-204ENST00000397404 ANK2Q01484 3957 aa14.04□□□□□ -0.16
TSPAN4-204ENST00000397404 ZNF324O75467 553 aaPredicted RBP14.03□□□□□ -0.16
TSPAN4-204ENST00000397404 PRB4P10163 310 aaPredicted RBP14.03□□□□□ -0.16
TSPAN4-204ENST00000397404 GFI1BQ5VTD9 330 aa14.03□□□□□ -0.16
TSPAN4-204ENST00000397404 WDR73Q6P4I2 378 aa14.03□□□□□ -0.16
TSPAN4-204ENST00000397404 NUP35Q8NFH5 326 aa14.03□□□□□ -0.16
TSPAN4-204ENST00000397404 LINC00467Q9BRT7 94 aa14.03□□□□□ -0.16
TSPAN4-204ENST00000397404 TRRAPQ9Y4A5 3859 aa14.02□□□□□ -0.16
TSPAN4-204ENST00000397404 INSP01308 110 aa14.02□□□□□ -0.16
TSPAN4-204ENST00000397404 MT-ND6P03923 174 aa14.02□□□□□ -0.16
TSPAN4-204ENST00000397404 RAB5AP20339 215 aa14.02□□□□□ -0.16
TSPAN4-204ENST00000397404 SPINK13Q1W4C9 94 aa14.02□□□□□ -0.16
TSPAN4-204ENST00000397404 PRR9Q5T870 116 aa14.02□□□□□ -0.16
TSPAN4-204ENST00000397404 SRD5A3Q9H8P0 318 aa14.02□□□□□ -0.16
TSPAN4-204ENST00000397404 CA1P00915 261 aaPredicted RBP14.01□□□□□ -0.17
TSPAN4-204ENST00000397404 IGKV3-20P01619 116 aa14.01□□□□□ -0.17
TSPAN4-204ENST00000397404 EGFEM1PQ0D2K5 195 aa14.01□□□□□ -0.17
TSPAN4-204ENST00000397404 CNFNQ9BYD5 112 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms