RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 LRP2P98164 4655 aa5.53□□□□□ -1.52
SCFD1-202ENST00000396629 LECT2O14960 151 aa5.52□□□□□ -1.53
SCFD1-202ENST00000396629 GATA1P15976 413 aaPredicted RBP5.52□□□□□ -1.53
SCFD1-202ENST00000396629 OR10J3Q5JRS4 329 aa5.52□□□□□ -1.53
SCFD1-202ENST00000396629 NHLRC2Q8NBF2 726 aa5.52□□□□□ -1.53
SCFD1-202ENST00000396629 DAZAP1Q96EP5 407 aaKnown RBP5.52□□□□□ -1.53
SCFD1-202ENST00000396629 TMEM14CQ9P0S9 112 aa5.52□□□□□ -1.53
SCFD1-202ENST00000396629 RSL24D1Q9UHA3 163 aaKnown RBP5.52□□□□□ -1.53
SCFD1-202ENST00000396629 IGKV2-40A0A087WW87 121 aaPredicted RBP5.52□□□□□ -1.53
SCFD1-202ENST00000396629 TRBV7-9A0A0J9YWB2 115 aa5.52□□□□□ -1.53
SCFD1-202ENST00000396629 TSC22D2O75157 780 aa5.52□□□□□ -1.53
SCFD1-202ENST00000396629 IGKV2D-40P01614 121 aaPredicted RBP5.52□□□□□ -1.53
SCFD1-202ENST00000396629 IGLV2-11P01706 119 aa5.52□□□□□ -1.53
SCFD1-202ENST00000396629 PFN1P07737 140 aaKnown RBP5.52□□□□□ -1.53
SCFD1-202ENST00000396629 HIST1H1EP10412 219 aaKnown RBP5.52□□□□□ -1.53
SCFD1-202ENST00000396629 TAS2R30P59541 319 aa5.52□□□□□ -1.53
SCFD1-202ENST00000396629 RPL37AP61513 92 aaKnown RBP5.52□□□□□ -1.53
SCFD1-202ENST00000396629 PDE6HQ13956 83 aa5.52□□□□□ -1.53
SCFD1-202ENST00000396629 TMEM78Q5T7P6 136 aa5.52□□□□□ -1.53
SCFD1-202ENST00000396629 LELP1Q5T871 98 aa5.52□□□□□ -1.53
SCFD1-202ENST00000396629 OR4C5Q8NGB2 326 aa5.52□□□□□ -1.53
SCFD1-202ENST00000396629 OR1L4Q8NGR5 311 aa5.52□□□□□ -1.53
SCFD1-202ENST00000396629 RAB2BQ8WUD1 216 aa5.52□□□□□ -1.53
SCFD1-202ENST00000396629 SOSTQ9BQB4 213 aa5.52□□□□□ -1.53
SCFD1-202ENST00000396629 FAUP35544 74 aaKnown RBP5.51□□□□□ -1.53
SCFD1-202ENST00000396629 MIC13Q5XKP0 118 aa5.51□□□□□ -1.53
SCFD1-202ENST00000396629 Q6ZRG5 221 aa5.51□□□□□ -1.53
SCFD1-202ENST00000396629 EXOC3-AS1Q8N2X6 119 aa5.51□□□□□ -1.53
SCFD1-202ENST00000396629 C12orf45Q8N5I9 185 aaPredicted RBP5.51□□□□□ -1.53
SCFD1-202ENST00000396629 PFDN5Q99471 154 aa5.51□□□□□ -1.53
SCFD1-202ENST00000396629 SLC25A21Q9BQT8 299 aaPredicted RBP5.51□□□□□ -1.53
SCFD1-202ENST00000396629 TIMM9Q9Y5J7 89 aa5.51□□□□□ -1.53
SCFD1-202ENST00000396629 TRAV8-3A0A0A6YYJ7 113 aa5.5□□□□□ -1.53
SCFD1-202ENST00000396629 RNF222A6NCQ9 220 aa5.5□□□□□ -1.53
SCFD1-202ENST00000396629 RBFOX3A6NFN3 312 aa5.5□□□□□ -1.53
SCFD1-202ENST00000396629 CAMLGP49069 296 aa5.5□□□□□ -1.53
SCFD1-202ENST00000396629 ZNF138P52744 262 aa5.5□□□□□ -1.53
SCFD1-202ENST00000396629 ZNF266Q14584 549 aa5.5□□□□□ -1.53
SCFD1-202ENST00000396629 MUC21Q5SSG8 566 aa5.5□□□□□ -1.53
SCFD1-202ENST00000396629 BAALCQ8WXS3 180 aa5.5□□□□□ -1.53
SCFD1-202ENST00000396629 TRGV11A0A075B6L2 103 aa5.5□□□□□ -1.53
SCFD1-202ENST00000396629 TMEM183BQ1AE95 376 aa5.5□□□□□ -1.53
SCFD1-202ENST00000396629 Q6AWC8 147 aa5.5□□□□□ -1.53
SCFD1-202ENST00000396629 NRARPQ7Z6K4 114 aa5.5□□□□□ -1.53
SCFD1-202ENST00000396629 TMEM183AQ8IXX5 376 aa5.5□□□□□ -1.53
SCFD1-202ENST00000396629 Q8N976 141 aa5.5□□□□□ -1.53
SCFD1-202ENST00000396629 AAMDCQ9H7C9 122 aa5.5□□□□□ -1.53
SCFD1-202ENST00000396629 IGHV3-16A0A0C4DH30 117 aa5.49□□□□□ -1.53
SCFD1-202ENST00000396629 M0R2P5 195 aa5.49□□□□□ -1.53
SCFD1-202ENST00000396629 UBE2MP61081 183 aaKnown RBP5.49□□□□□ -1.53
SCFD1-202ENST00000396629 RAB31Q13636 194 aa5.49□□□□□ -1.53
SCFD1-202ENST00000396629 Q8N3U1 123 aa5.49□□□□□ -1.53
SCFD1-202ENST00000396629 COX11Q9Y6N1 276 aa5.49□□□□□ -1.53
SCFD1-202ENST00000396629 C9orf170A2RU37 121 aa5.48□□□□□ -1.53
SCFD1-202ENST00000396629 FABP12A6NFH5 140 aa5.48□□□□□ -1.53
SCFD1-202ENST00000396629 PYYP10082 97 aa5.48□□□□□ -1.53
SCFD1-202ENST00000396629 RPL29P47914 159 aaKnown RBP5.48□□□□□ -1.53
SCFD1-202ENST00000396629 SPCS2Q15005 226 aa5.48□□□□□ -1.53
SCFD1-202ENST00000396629 SLC25A29Q8N8R3 303 aa5.48□□□□□ -1.53
SCFD1-202ENST00000396629 ATP6V0E2Q8NHE4 81 aa5.48□□□□□ -1.53
SCFD1-202ENST00000396629 MCFD2Q8NI22 146 aa5.48□□□□□ -1.53
SCFD1-202ENST00000396629 Q8TAT8 98 aa5.48□□□□□ -1.53
SCFD1-202ENST00000396629 TRIM63Q969Q1 353 aa5.48□□□□□ -1.53
SCFD1-202ENST00000396629 GTSF1LQ9H1H1 148 aa5.48□□□□□ -1.53
SCFD1-202ENST00000396629 AP3S2P59780 193 aa5.48□□□□□ -1.53
SCFD1-202ENST00000396629 BAK1Q16611 211 aa5.48□□□□□ -1.53
SCFD1-202ENST00000396629 TOR2AQ5JU69 321 aa5.48□□□□□ -1.53
SCFD1-202ENST00000396629 FAM122CQ6P4D5 195 aa5.48□□□□□ -1.53
SCFD1-202ENST00000396629 FAM159AQ6UWV7 190 aa5.48□□□□□ -1.53
SCFD1-202ENST00000396629 Q6ZRU5 148 aa5.48□□□□□ -1.53
SCFD1-202ENST00000396629 PRADC1Q9BSG0 188 aa5.48□□□□□ -1.53
SCFD1-202ENST00000396629 SLC39A9Q9NUM3 307 aa5.48□□□□□ -1.53
SCFD1-202ENST00000396629 WDR83OSQ9Y284 106 aa5.48□□□□□ -1.53
SCFD1-202ENST00000396629 TRBV6-4A0A1B0GX49 114 aa5.47□□□□□ -1.53
SCFD1-202ENST00000396629 C7orf66A4D0T2 115 aa5.47□□□□□ -1.53
SCFD1-202ENST00000396629 RBAKDNA6NC62 111 aa5.47□□□□□ -1.53
SCFD1-202ENST00000396629 FBLL1A6NHQ2 334 aaKnown RBP5.47□□□□□ -1.53
SCFD1-202ENST00000396629 CIDEAO60543 219 aa5.47□□□□□ -1.53
SCFD1-202ENST00000396629 SCGB1D2O95969 90 aa5.47□□□□□ -1.53
SCFD1-202ENST00000396629 RHOHQ15669 191 aa5.47□□□□□ -1.53
SCFD1-202ENST00000396629 DAZ4Q86SG3 579 aaKnown RBP5.47□□□□□ -1.53
SCFD1-202ENST00000396629 TOMM5Q8N4H5 51 aa5.47□□□□□ -1.53
SCFD1-202ENST00000396629 CHAC2Q8WUX2 184 aa5.47□□□□□ -1.53
SCFD1-202ENST00000396629 DEDD2Q8WXF8 326 aa5.47□□□□□ -1.53
SCFD1-202ENST00000396629 ANAPC16Q96DE5 110 aa5.47□□□□□ -1.53
SCFD1-202ENST00000396629 PAXXQ9BUH6 204 aa5.47□□□□□ -1.53
SCFD1-202ENST00000396629 DAZ3Q9NR90 486 aaKnown RBP5.47□□□□□ -1.53
SCFD1-202ENST00000396629 GGTLC3B5MD39 225 aa5.47□□□□□ -1.53
SCFD1-202ENST00000396629 GNRH2O43555 120 aa5.47□□□□□ -1.53
SCFD1-202ENST00000396629 VWC2Q2TAL6 325 aa5.47□□□□□ -1.53
SCFD1-202ENST00000396629 DYNC2LI1Q8TCX1 351 aa5.47□□□□□ -1.53
SCFD1-202ENST00000396629 SLC25A2Q9BXI2 301 aa5.47□□□□□ -1.53
SCFD1-202ENST00000396629 C20orf85Q9H1P6 137 aa5.47□□□□□ -1.53
SCFD1-202ENST00000396629 LENEPQ9Y5L5 61 aa5.47□□□□□ -1.53
SCFD1-202ENST00000396629 MBPP02686 304 aaPredicted RBP5.46□□□□□ -1.54
SCFD1-202ENST00000396629 NBEAP1P0C6P0 100 aa5.46□□□□□ -1.54
SCFD1-202ENST00000396629 ASIPP42127 132 aa5.46□□□□□ -1.54
SCFD1-202ENST00000396629 IAH1Q2TAA2 248 aaPredicted RBP5.46□□□□□ -1.54
SCFD1-202ENST00000396629 RMI2Q96E14 147 aa5.46□□□□□ -1.54
SCFD1-202ENST00000396629 FAM167A-AS1Q96KT0 104 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms