RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 CELSR1Q9NYQ6 3014 aa11.36□□□□□ -0.59
CBX3-202ENST00000396386 POLQO75417 2590 aa11.36□□□□□ -0.59
CBX3-202ENST00000396386 RPLP1P05386 114 aaKnown RBP11.36□□□□□ -0.59
CBX3-202ENST00000396386 ELANEP08246 267 aa11.36□□□□□ -0.59
CBX3-202ENST00000396386 TEX43Q6ZNM6 134 aa11.36□□□□□ -0.59
CBX3-202ENST00000396386 LGALS1P09382 135 aaKnown RBP11.35□□□□□ -0.59
CBX3-202ENST00000396386 DMRTA1Q5VZB9 504 aa11.35□□□□□ -0.59
CBX3-202ENST00000396386 TEX29Q8N6K0 151 aa11.35□□□□□ -0.59
CBX3-202ENST00000396386 LINC00477Q96M19 166 aa11.35□□□□□ -0.59
CBX3-202ENST00000396386 CSPG4Q6UVK1 2322 aa11.34□□□□□ -0.59
CBX3-202ENST00000396386 M0QZ24 198 aa11.34□□□□□ -0.59
CBX3-202ENST00000396386 SAMD13Q5VXD3 122 aa11.34□□□□□ -0.59
CBX3-202ENST00000396386 MYOZ3Q8TDC0 251 aa11.34□□□□□ -0.59
CBX3-202ENST00000396386 CNFNQ9BYD5 112 aa11.34□□□□□ -0.59
CBX3-202ENST00000396386 ABCA12Q86UK0 2595 aa11.34□□□□□ -0.59
CBX3-202ENST00000396386 KIR2DL5BA0A0G2JN68 375 aa11.34□□□□□ -0.59
CBX3-202ENST00000396386 KIR2DL5BA0A0G2JPC4 375 aa11.34□□□□□ -0.59
CBX3-202ENST00000396386 FAM181BA6NEQ2 426 aa11.34□□□□□ -0.59
CBX3-202ENST00000396386 C3orf79P0CE67 100 aa11.34□□□□□ -0.59
CBX3-202ENST00000396386 CTAG1AP78358 180 aa11.34□□□□□ -0.59
CBX3-202ENST00000396386 DEFA6Q01524 100 aa11.34□□□□□ -0.59
CBX3-202ENST00000396386 TWIST1Q15672 202 aa11.34□□□□□ -0.59
CBX3-202ENST00000396386 FAM104BQ5XKR9 115 aa11.34□□□□□ -0.59
CBX3-202ENST00000396386 KIR2DL5AQ8N109 375 aa11.34□□□□□ -0.59
CBX3-202ENST00000396386 IGKV3-7A0A075B6H7 116 aa11.33□□□□□ -0.6
CBX3-202ENST00000396386 MUC21A0A0G2JKD1 596 aa11.33□□□□□ -0.6
CBX3-202ENST00000396386 MUC21A0A140T8X8 626 aa11.33□□□□□ -0.6
CBX3-202ENST00000396386 SSTP61278 116 aa11.33□□□□□ -0.6
CBX3-202ENST00000396386 MUC21Q5SSG8 566 aa11.33□□□□□ -0.6
CBX3-202ENST00000396386 ZNF575Q86XF7 245 aa11.33□□□□□ -0.6
CBX3-202ENST00000396386 Q8N976 141 aa11.33□□□□□ -0.6
CBX3-202ENST00000396386 WFDC11Q8NEX6 87 aa11.33□□□□□ -0.6
CBX3-202ENST00000396386 IGKV3D-20A0A0C4DH25 116 aa11.32□□□□□ -0.6
CBX3-202ENST00000396386 LINC00614P0C842 121 aa11.32□□□□□ -0.6
CBX3-202ENST00000396386 EDN2P20800 178 aa11.32□□□□□ -0.6
CBX3-202ENST00000396386 HIST2H2BCQ6DN03 193 aa11.32□□□□□ -0.6
CBX3-202ENST00000396386 REC114Q7Z4M0 266 aa11.32□□□□□ -0.6
CBX3-202ENST00000396386 AMN1Q8IY45 258 aa11.32□□□□□ -0.6
CBX3-202ENST00000396386 Q8N2B8 174 aa11.32□□□□□ -0.6
CBX3-202ENST00000396386 RNF152Q8N8N0 203 aa11.32□□□□□ -0.6
CBX3-202ENST00000396386 C11orf21Q9P2W6 132 aa11.32□□□□□ -0.6
CBX3-202ENST00000396386 U3KQK5 164 aa11.32□□□□□ -0.6
CBX3-202ENST00000396386 ZFHX3Q15911 3703 aa11.32□□□□□ -0.6
CBX3-202ENST00000396386 CREBBPQ92793 2442 aa11.32□□□□□ -0.6
CBX3-202ENST00000396386 IGHV1-24A0A0C4DH33 117 aa11.32□□□□□ -0.6
CBX3-202ENST00000396386 RAB4AP20338 218 aa11.32□□□□□ -0.6
CBX3-202ENST00000396386 OR8A1Q8NGG7 326 aa11.32□□□□□ -0.6
CBX3-202ENST00000396386 UBE2E2Q96LR5 201 aa11.32□□□□□ -0.6
CBX3-202ENST00000396386 VAMP8Q9BV40 100 aa11.32□□□□□ -0.6
CBX3-202ENST00000396386 CSMD2Q7Z408 3487 aa11.31□□□□□ -0.6
CBX3-202ENST00000396386 D6R8Y8 96 aa11.31□□□□□ -0.6
CBX3-202ENST00000396386 ID1P41134 155 aa11.31□□□□□ -0.6
CBX3-202ENST00000396386 PRR9Q5T870 116 aa11.31□□□□□ -0.6
CBX3-202ENST00000396386 ORMDL3Q8N138 153 aa11.31□□□□□ -0.6
CBX3-202ENST00000396386 TMEM191AQ9H0A3 160 aa11.31□□□□□ -0.6
CBX3-202ENST00000396386 CSN3P07498 182 aa11.3□□□□□ -0.6
CBX3-202ENST00000396386 PMCHL1Q16048 86 aa11.3□□□□□ -0.6
CBX3-202ENST00000396386 MRPL51Q4U2R6 128 aaKnown RBP11.3□□□□□ -0.6
CBX3-202ENST00000396386 TMEM86BQ8N661 226 aa11.3□□□□□ -0.6
CBX3-202ENST00000396386 ZFAND2AQ8N6M9 145 aa11.3□□□□□ -0.6
CBX3-202ENST00000396386 PRELID3AQ96N28 172 aa11.3□□□□□ -0.6
CBX3-202ENST00000396386 IGHV4OR15-8A0A075B7B6 117 aa11.29□□□□□ -0.6
CBX3-202ENST00000396386 A0A087WW49 117 aa11.29□□□□□ -0.6
CBX3-202ENST00000396386 LGALS9O00182 355 aa11.29□□□□□ -0.6
CBX3-202ENST00000396386 DUX5Q96PT3 197 aa11.29□□□□□ -0.6
CBX3-202ENST00000396386 TRAV21A0A0B4J279 112 aa11.29□□□□□ -0.6
CBX3-202ENST00000396386 TRBV7-9A0A0J9YWB2 115 aa11.29□□□□□ -0.6
CBX3-202ENST00000396386 SRD5A1P18405 259 aa11.29□□□□□ -0.6
CBX3-202ENST00000396386 BTF3P20290 206 aaKnown RBP11.29□□□□□ -0.6
CBX3-202ENST00000396386 DEFB1P60022 68 aa11.29□□□□□ -0.6
CBX3-202ENST00000396386 EBLN2Q6P2I7 272 aa11.29□□□□□ -0.6
CBX3-202ENST00000396386 FA2HQ7L5A8 372 aa11.29□□□□□ -0.6
CBX3-202ENST00000396386 DCANP1Q8TF63 244 aa11.29□□□□□ -0.6
CBX3-202ENST00000396386 FAM19A4Q96LR4 140 aa11.29□□□□□ -0.6
CBX3-202ENST00000396386 SELENOKQ9Y6D0 94 aa11.29□□□□□ -0.6
CBX3-202ENST00000396386 C2orf70A6NJV1 201 aa11.28□□□□□ -0.6
CBX3-202ENST00000396386 F6UB75 175 aa11.28□□□□□ -0.6
CBX3-202ENST00000396386 OR5AL1P0C617 328 aa11.28□□□□□ -0.6
CBX3-202ENST00000396386 SYNJ2BPP57105 145 aa11.28□□□□□ -0.6
CBX3-202ENST00000396386 C20orf144Q9BQM9 153 aa11.28□□□□□ -0.6
CBX3-202ENST00000396386 NDUFAF3Q9BU61 184 aa11.28□□□□□ -0.6
CBX3-202ENST00000396386 AP5S1Q9NUS5 200 aa11.28□□□□□ -0.6
CBX3-202ENST00000396386 PAM16Q9Y3D7 125 aa11.28□□□□□ -0.6
CBX3-202ENST00000396386 J3KRW8 73 aa11.27□□□□□ -0.6
CBX3-202ENST00000396386 LEPROTL1O95214 131 aa11.27□□□□□ -0.6
CBX3-202ENST00000396386 HOXD3P31249 432 aaPredicted RBP11.27□□□□□ -0.6
CBX3-202ENST00000396386 PRSS3P2Q8NHM4 247 aa11.27□□□□□ -0.6
CBX3-202ENST00000396386 C14orf144Q96I85 54 aa11.27□□□□□ -0.6
CBX3-202ENST00000396386 MSRB1Q9NZV6 116 aa11.27□□□□□ -0.6
CBX3-202ENST00000396386 SNAI2O43623 268 aa11.27□□□□□ -0.61
CBX3-202ENST00000396386 CKS2P33552 79 aa11.27□□□□□ -0.61
CBX3-202ENST00000396386 CACNG7P62955 275 aa11.27□□□□□ -0.61
CBX3-202ENST00000396386 TDRG1Q3Y452 100 aa11.27□□□□□ -0.61
CBX3-202ENST00000396386 APRG1Q8IVJ8 170 aa11.27□□□□□ -0.61
CBX3-202ENST00000396386 MAP1AP78559 2803 aaPredicted RBP11.27□□□□□ -0.61
CBX3-202ENST00000396386 Q6ZQT7 251 aa11.26□□□□□ -0.61
CBX3-202ENST00000396386 WFDC3Q8IUB2 231 aa11.26□□□□□ -0.61
CBX3-202ENST00000396386 KLHDC1Q8N7A1 406 aa11.26□□□□□ -0.61
CBX3-202ENST00000396386 OR10AG1Q8NH19 301 aa11.26□□□□□ -0.61
CBX3-202ENST00000396386 RNF185Q96GF1 192 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms