RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 MRPL16Q9NX20 251 aaKnown RBP12.66□□□□□ -0.38
FXN-203ENST00000396366 RYR1P21817 5038 aa12.65□□□□□ -0.38
FXN-203ENST00000396366 DIRC3C9JPN6 131 aa12.65□□□□□ -0.38
FXN-203ENST00000396366 H3BNG1 76 aa12.65□□□□□ -0.38
FXN-203ENST00000396366 IGHV3-53P01767 116 aa12.65□□□□□ -0.38
FXN-203ENST00000396366 MED14OSP0DP75 135 aa12.65□□□□□ -0.38
FXN-203ENST00000396366 RAB2AP61019 212 aa12.65□□□□□ -0.38
FXN-203ENST00000396366 KHDC3LQ587J8 217 aa12.65□□□□□ -0.38
FXN-203ENST00000396366 LYPD1Q8N2G4 141 aa12.65□□□□□ -0.38
FXN-203ENST00000396366 C18orf15Q96N68 181 aa12.65□□□□□ -0.38
FXN-203ENST00000396366 MUC4Q99102 2169 aa12.64□□□□□ -0.39
FXN-203ENST00000396366 A0A096LPF7 62 aa12.64□□□□□ -0.39
FXN-203ENST00000396366 HMGB3O15347 200 aaKnown RBP12.64□□□□□ -0.39
FXN-203ENST00000396366 TAS2R45P59539 299 aa12.64□□□□□ -0.39
FXN-203ENST00000396366 IBA57Q5T440 356 aaKnown RBP12.64□□□□□ -0.39
FXN-203ENST00000396366 MDFICQ9P1T7 246 aa12.64□□□□□ -0.39
FXN-203ENST00000396366 RBAKDNA6NC62 111 aa12.63□□□□□ -0.39
FXN-203ENST00000396366 PGPA6NDG6 321 aa12.63□□□□□ -0.39
FXN-203ENST00000396366 ZNF266Q14584 549 aa12.63□□□□□ -0.39
FXN-203ENST00000396366 ARPC5LQ9BPX5 153 aa12.63□□□□□ -0.39
FXN-203ENST00000396366 BATF3Q9NR55 127 aa12.63□□□□□ -0.39
FXN-203ENST00000396366 RPH3ALQ9UNE2 315 aa12.63□□□□□ -0.39
FXN-203ENST00000396366 TRBV7-9A0A0J9YWB2 115 aa12.62□□□□□ -0.39
FXN-203ENST00000396366 ACOT6Q3I5F7 207 aaPredicted RBP12.62□□□□□ -0.39
FXN-203ENST00000396366 ST6GAL2Q96JF0 529 aa12.62□□□□□ -0.39
FXN-203ENST00000396366 OTORQ9NRC9 128 aa12.62□□□□□ -0.39
FXN-203ENST00000396366 MRPS16Q9Y3D3 137 aaKnown RBP12.62□□□□□ -0.39
FXN-203ENST00000396366 A0A1W2PPV4 95 aa12.61□□□□□ -0.39
FXN-203ENST00000396366 Q5BKY6 102 aa12.61□□□□□ -0.39
FXN-203ENST00000396366 OR10G4Q8NGN3 311 aa12.61□□□□□ -0.39
FXN-203ENST00000396366 OR10G9Q8NGN4 311 aa12.61□□□□□ -0.39
FXN-203ENST00000396366 OR10G7Q8NGN6 311 aa12.61□□□□□ -0.39
FXN-203ENST00000396366 UPK3BQ9BT76 320 aa12.61□□□□□ -0.39
FXN-203ENST00000396366 FHL2Q14192 279 aa12.6□□□□□ -0.39
FXN-203ENST00000396366 Q6AWC8 147 aa12.6□□□□□ -0.39
FXN-203ENST00000396366 TVP23CQ96ET8 276 aa12.6□□□□□ -0.39
FXN-203ENST00000396366 LRP1BQ9NZR2 4599 aa12.59□□□□□ -0.39
FXN-203ENST00000396366 TRAV8-1A0A0A6YYK1 113 aa12.59□□□□□ -0.39
FXN-203ENST00000396366 PAX4O43316 350 aa12.59□□□□□ -0.39
FXN-203ENST00000396366 GNG5P63218 68 aa12.59□□□□□ -0.39
FXN-203ENST00000396366 ZNF415Q09FC8 603 aa12.59□□□□□ -0.39
FXN-203ENST00000396366 TMEM183BQ1AE95 376 aa12.59□□□□□ -0.39
FXN-203ENST00000396366 GOLT1AQ6ZVE7 132 aa12.59□□□□□ -0.39
FXN-203ENST00000396366 TMEM183AQ8IXX5 376 aa12.59□□□□□ -0.39
FXN-203ENST00000396366 HSD17B11Q8NBQ5 300 aa12.59□□□□□ -0.39
FXN-203ENST00000396366 CMTM2Q8TAZ6 248 aa12.59□□□□□ -0.39
FXN-203ENST00000396366 C8orf49Q96NF6 230 aa12.59□□□□□ -0.39
FXN-203ENST00000396366 GNRH2O43555 120 aa12.58□□□□□ -0.4
FXN-203ENST00000396366 CRYBA4P53673 196 aa12.58□□□□□ -0.4
FXN-203ENST00000396366 PQLC2Q6ZP29 291 aa12.58□□□□□ -0.4
FXN-203ENST00000396366 SGK494Q96LW2 274 aa12.58□□□□□ -0.4
FXN-203ENST00000396366 MED28Q9H204 178 aa12.58□□□□□ -0.4
FXN-203ENST00000396366 NAGKQ9UJ70 344 aa12.58□□□□□ -0.4
FXN-203ENST00000396366 HHLA3Q9XRX5 114 aa12.58□□□□□ -0.4
FXN-203ENST00000396366 ABCA13Q86UQ4 5058 aa12.57□□□□□ -0.4
FXN-203ENST00000396366 SFTA3P0C7M3 94 aa12.57□□□□□ -0.4
FXN-203ENST00000396366 ARL14EPLP0DKL9 152 aa12.57□□□□□ -0.4
FXN-203ENST00000396366 FAM159AQ6UWV7 190 aa12.57□□□□□ -0.4
FXN-203ENST00000396366 TMED6Q8WW62 240 aa12.57□□□□□ -0.4
FXN-203ENST00000396366 LENEPQ9Y5L5 61 aa12.57□□□□□ -0.4
FXN-203ENST00000396366 HSPG2P98160 4391 aa12.57□□□□□ -0.4
FXN-203ENST00000396366 F6UZH7 168 aa12.56□□□□□ -0.4
FXN-203ENST00000396366 PTTG1O95997 202 aa12.56□□□□□ -0.4
FXN-203ENST00000396366 FAM74A1Q5RGS3 127 aa12.56□□□□□ -0.4
FXN-203ENST00000396366 ZNF479Q96JC4 524 aa12.56□□□□□ -0.4
FXN-203ENST00000396366 PRO0255Q9UI72 69 aa12.56□□□□□ -0.4
FXN-203ENST00000396366 ICOSQ9Y6W8 199 aa12.56□□□□□ -0.4
FXN-203ENST00000396366 C16orf90A8MZG2 172 aa12.55□□□□□ -0.4
FXN-203ENST00000396366 STAG3L2P0CL84 134 aa12.55□□□□□ -0.4
FXN-203ENST00000396366 STAG3L3P0CL85 134 aa12.55□□□□□ -0.4
FXN-203ENST00000396366 ATP6V0CP27449 155 aa12.55□□□□□ -0.4
FXN-203ENST00000396366 CDC34P49427 236 aaPredicted RBP12.55□□□□□ -0.4
FXN-203ENST00000396366 TTC32Q5I0X7 151 aa12.55□□□□□ -0.4
FXN-203ENST00000396366 OR2G3Q8NGZ4 309 aa12.55□□□□□ -0.4
FXN-203ENST00000396366 RASL10AQ92737 203 aa12.55□□□□□ -0.4
FXN-203ENST00000396366 RAB24Q969Q5 203 aa12.55□□□□□ -0.4
FXN-203ENST00000396366 AQP10Q96PS8 301 aa12.55□□□□□ -0.4
FXN-203ENST00000396366 SH3BGRL3Q9H299 93 aa12.55□□□□□ -0.4
FXN-203ENST00000396366 A0A1W2PPQ1 181 aa12.54□□□□□ -0.4
FXN-203ENST00000396366 LYPD5Q6UWN5 251 aa12.54□□□□□ -0.4
FXN-203ENST00000396366 TREM1Q9NP99 234 aa12.54□□□□□ -0.4
FXN-203ENST00000396366 TRGV11A0A075B6L2 103 aa12.53□□□□□ -0.4
FXN-203ENST00000396366 TRGV4A0A0C4DH28 118 aa12.53□□□□□ -0.4
FXN-203ENST00000396366 IGHV3-16A0A0C4DH30 117 aa12.53□□□□□ -0.4
FXN-203ENST00000396366 NXPH4O95158 308 aa12.53□□□□□ -0.4
FXN-203ENST00000396366 GCHFRP30047 84 aa12.53□□□□□ -0.4
FXN-203ENST00000396366 TDRG1Q3Y452 100 aa12.53□□□□□ -0.4
FXN-203ENST00000396366 SPXQ9BT56 116 aa12.53□□□□□ -0.4
FXN-203ENST00000396366 PSMG3Q9BT73 122 aaPredicted RBP12.53□□□□□ -0.4
FXN-203ENST00000396366 DNAH5Q8TE73 4624 aa12.52□□□□□ -0.4
FXN-203ENST00000396366 SIVA1O15304 175 aa12.52□□□□□ -0.41
FXN-203ENST00000396366 SLAQ13239 276 aa12.52□□□□□ -0.41
FXN-203ENST00000396366 SPATA12Q7Z6I5 190 aa12.52□□□□□ -0.41
FXN-203ENST00000396366 ARL6IP6Q8N6S5 226 aa12.52□□□□□ -0.41
FXN-203ENST00000396366 SUN5Q8TC36 379 aa12.52□□□□□ -0.41
FXN-203ENST00000396366 KRTAP4-5Q9BYR2 181 aa12.52□□□□□ -0.41
FXN-203ENST00000396366 TNFRSF18Q9Y5U5 241 aa12.52□□□□□ -0.41
FXN-203ENST00000396366 TRAV21A0A0B4J279 112 aa12.51□□□□□ -0.41
FXN-203ENST00000396366 K7EQD1 137 aa12.51□□□□□ -0.41
FXN-203ENST00000396366 TYMSP04818 313 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms