RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 SVEP1Q4LDE5 3571 aa12.77□□□□□ -0.36
NUP50-202ENST00000396096 IGHV7-4-1A0A0J9YVY3 117 aa12.77□□□□□ -0.37
NUP50-202ENST00000396096 CKS2P33552 79 aa12.77□□□□□ -0.37
NUP50-202ENST00000396096 SSTP61278 116 aa12.77□□□□□ -0.37
NUP50-202ENST00000396096 DEFB112Q30KQ8 113 aa12.77□□□□□ -0.37
NUP50-202ENST00000396096 ZNF738Q8NE65 137 aa12.77□□□□□ -0.37
NUP50-202ENST00000396096 MSRB1Q9NZV6 116 aa12.77□□□□□ -0.37
NUP50-202ENST00000396096 LAMTOR2Q9Y2Q5 125 aa12.77□□□□□ -0.37
NUP50-202ENST00000396096 A0A096LNJ9 63 aa12.76□□□□□ -0.37
NUP50-202ENST00000396096 TMEM89A2RUT3 159 aa12.76□□□□□ -0.37
NUP50-202ENST00000396096 SRSF1Q07955 248 aaKnown RBP eCLIP12.76□□□□□ -0.37
NUP50-202ENST00000396096 LINC01545Q5VT33 79 aa12.76□□□□□ -0.37
NUP50-202ENST00000396096 COL12A1Q99715 3063 aa12.76□□□□□ -0.37
NUP50-202ENST00000396096 USP24Q9UPU5 2620 aa12.76□□□□□ -0.37
NUP50-202ENST00000396096 K7EMT4 169 aa12.76□□□□□ -0.37
NUP50-202ENST00000396096 IGHV4-59P01825 116 aa12.76□□□□□ -0.37
NUP50-202ENST00000396096 LOXL1Q08397 574 aaPredicted RBP12.76□□□□□ -0.37
NUP50-202ENST00000396096 Q6ZN92 141 aa12.76□□□□□ -0.37
NUP50-202ENST00000396096 ST20Q9HBF5 79 aa12.76□□□□□ -0.37
NUP50-202ENST00000396096 IGHV4-4A0A075B6R2 117 aa12.75□□□□□ -0.37
NUP50-202ENST00000396096 LINC01546A6NGU7 62 aa12.75□□□□□ -0.37
NUP50-202ENST00000396096 NPYP01303 97 aa12.75□□□□□ -0.37
NUP50-202ENST00000396096 PSMB8P28062 276 aa12.75□□□□□ -0.37
NUP50-202ENST00000396096 HNRNPA3P51991 378 aaKnown RBP12.75□□□□□ -0.37
NUP50-202ENST00000396096 FAM106AQ4KMX7 169 aa12.75□□□□□ -0.37
NUP50-202ENST00000396096 ZNF843Q8N446 348 aa12.75□□□□□ -0.37
NUP50-202ENST00000396096 DAZ1Q9NQZ3 744 aaKnown RBP12.75□□□□□ -0.37
NUP50-202ENST00000396096 PEF1Q9UBV8 284 aaKnown RBP12.75□□□□□ -0.37
NUP50-202ENST00000396096 MRPS16Q9Y3D3 137 aaKnown RBP12.75□□□□□ -0.37
NUP50-202ENST00000396096 SNAI2O43623 268 aa12.74□□□□□ -0.37
NUP50-202ENST00000396096 FSHBP01225 129 aa12.74□□□□□ -0.37
NUP50-202ENST00000396096 FOXE3Q13461 319 aa12.74□□□□□ -0.37
NUP50-202ENST00000396096 LCNL1Q6ZST4 164 aa12.74□□□□□ -0.37
NUP50-202ENST00000396096 OR10J6PQ8NGY7 276 aa12.74□□□□□ -0.37
NUP50-202ENST00000396096 LOC389332A0A1B0GUA5 103 aa12.74□□□□□ -0.37
NUP50-202ENST00000396096 TCF21O43680 179 aa12.74□□□□□ -0.37
NUP50-202ENST00000396096 TSPOP30536 169 aa12.74□□□□□ -0.37
NUP50-202ENST00000396096 FAM19A4Q96LR4 140 aa12.74□□□□□ -0.37
NUP50-202ENST00000396096 RHPN1-AS1Q9BWJ2 59 aa12.74□□□□□ -0.37
NUP50-202ENST00000396096 SMPXQ9UHP9 88 aa12.74□□□□□ -0.37
NUP50-202ENST00000396096 TRBV7-9A0A0J9YWB2 115 aa12.73□□□□□ -0.37
NUP50-202ENST00000396096 SMKR1H3BMG3 65 aa12.73□□□□□ -0.37
NUP50-202ENST00000396096 RPLP1P05386 114 aaKnown RBP12.73□□□□□ -0.37
NUP50-202ENST00000396096 PRR9Q5T870 116 aa12.73□□□□□ -0.37
NUP50-202ENST00000396096 ZFAND2AQ8N6M9 145 aa12.73□□□□□ -0.37
NUP50-202ENST00000396096 MYO18BQ8IUG5 2567 aa12.73□□□□□ -0.37
NUP50-202ENST00000396096 VPS13CQ709C8 3753 aa12.73□□□□□ -0.37
NUP50-202ENST00000396096 TGFAP01135 160 aa12.72□□□□□ -0.37
NUP50-202ENST00000396096 CACNG7P62955 275 aa12.72□□□□□ -0.37
NUP50-202ENST00000396096 TM4SF20Q53R12 229 aa12.72□□□□□ -0.37
NUP50-202ENST00000396096 PRSS57Q6UWY2 283 aa12.72□□□□□ -0.37
NUP50-202ENST00000396096 APRG1Q8IVJ8 170 aa12.72□□□□□ -0.37
NUP50-202ENST00000396096 NCR2O95944 276 aa12.72□□□□□ -0.37
NUP50-202ENST00000396096 TMEM95Q3KNT9 176 aa12.72□□□□□ -0.37
NUP50-202ENST00000396096 MAP1LC3AQ9H492 121 aa12.72□□□□□ -0.37
NUP50-202ENST00000396096 HBDP02042 147 aa12.71□□□□□ -0.37
NUP50-202ENST00000396096 SAMD13Q5VXD3 122 aa12.71□□□□□ -0.37
NUP50-202ENST00000396096 MS4A6AQ9H2W1 248 aa12.71□□□□□ -0.37
NUP50-202ENST00000396096 OR8A1Q8NGG7 326 aa12.7□□□□□ -0.38
NUP50-202ENST00000396096 BEX4Q9NWD9 120 aaPredicted RBP12.7□□□□□ -0.38
NUP50-202ENST00000396096 TRAV21A0A0B4J279 112 aa12.7□□□□□ -0.38
NUP50-202ENST00000396096 hDV102S1A0JD36 115 aa12.7□□□□□ -0.38
NUP50-202ENST00000396096 HSBP1L1C9JCN9 74 aa12.7□□□□□ -0.38
NUP50-202ENST00000396096 TCAPO15273 167 aa12.7□□□□□ -0.38
NUP50-202ENST00000396096 TNFRSF6BO95407 300 aa12.7□□□□□ -0.38
NUP50-202ENST00000396096 IGHV4-31P0DP07 118 aa12.7□□□□□ -0.38
NUP50-202ENST00000396096 Q6ZQT7 251 aa12.7□□□□□ -0.38
NUP50-202ENST00000396096 NXT2Q9NPJ8 142 aaKnown RBP12.7□□□□□ -0.38
NUP50-202ENST00000396096 COL5A1-AS1Q5SY13 56 aa12.69□□□□□ -0.38
NUP50-202ENST00000396096 SMIM15Q7Z3B0 74 aa12.69□□□□□ -0.38
NUP50-202ENST00000396096 LRRC75A-AS1Q8N1F1 130 aa12.69□□□□□ -0.38
NUP50-202ENST00000396096 DEFB125Q8N687 156 aa12.69□□□□□ -0.38
NUP50-202ENST00000396096 VPREB3Q9UKI3 123 aa12.69□□□□□ -0.38
NUP50-202ENST00000396096 UFC1Q9Y3C8 167 aa12.69□□□□□ -0.38
NUP50-202ENST00000396096 TIMM8BQ9Y5J9 83 aaPredicted RBP12.69□□□□□ -0.38
NUP50-202ENST00000396096 A1L4Q6 167 aa12.68□□□□□ -0.38
NUP50-202ENST00000396096 PRSS47A8MTI9 375 aa12.68□□□□□ -0.38
NUP50-202ENST00000396096 RNF223E7ERA6 249 aa12.68□□□□□ -0.38
NUP50-202ENST00000396096 RPL11P62913 178 aaKnown RBP12.68□□□□□ -0.38
NUP50-202ENST00000396096 Q6YL49 198 aa12.68□□□□□ -0.38
NUP50-202ENST00000396096 CR1P17927 2039 aa12.68□□□□□ -0.38
NUP50-202ENST00000396096 UBR5O95071 2799 aaPredicted RBP12.68□□□□□ -0.38
NUP50-202ENST00000396096 ZFHX3Q15911 3703 aa12.68□□□□□ -0.38
NUP50-202ENST00000396096 ANKRD17O75179 2603 aaKnown RBP12.68□□□□□ -0.38
NUP50-202ENST00000396096 ZNF462Q96JM2 2506 aa12.68□□□□□ -0.38
NUP50-202ENST00000396096 GAS8-AS1O95177 125 aa12.68□□□□□ -0.38
NUP50-202ENST00000396096 MED14OSP0DP75 135 aa12.68□□□□□ -0.38
NUP50-202ENST00000396096 LGALS9BQ3B8N2 356 aa12.68□□□□□ -0.38
NUP50-202ENST00000396096 LGALS9CQ6DKI2 356 aa12.68□□□□□ -0.38
NUP50-202ENST00000396096 CSPG4Q6UVK1 2322 aa12.67□□□□□ -0.38
NUP50-202ENST00000396096 EVI2AP22794 236 aa12.67□□□□□ -0.38
NUP50-202ENST00000396096 BATFQ16520 125 aa12.67□□□□□ -0.38
NUP50-202ENST00000396096 MAPK1IP1LQ8NDC0 245 aa12.67□□□□□ -0.38
NUP50-202ENST00000396096 MYOZ3Q8TDC0 251 aa12.67□□□□□ -0.38
NUP50-202ENST00000396096 MCRIP2Q9BUT9 160 aaKnown RBP12.67□□□□□ -0.38
NUP50-202ENST00000396096 SCRT2Q9NQ03 307 aa12.67□□□□□ -0.38
NUP50-202ENST00000396096 CELSR1Q9NYQ6 3014 aa12.67□□□□□ -0.38
NUP50-202ENST00000396096 H0Y8G0 127 aa12.66□□□□□ -0.38
NUP50-202ENST00000396096 ID1P41134 155 aa12.66□□□□□ -0.38
NUP50-202ENST00000396096 DEFB113Q30KQ7 82 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 593.6 ms