RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 H3BUT2 72 aa8.19□□□□□ -1.1
ACTN1-203ENST00000394419 H3BVH4 76 aa8.19□□□□□ -1.1
ACTN1-203ENST00000394419 GAS8-AS1O95177 125 aa8.19□□□□□ -1.1
ACTN1-203ENST00000394419 SCGB2A2Q13296 93 aa8.19□□□□□ -1.1
ACTN1-203ENST00000394419 TTTY13Q9BZ97 58 aa8.19□□□□□ -1.1
ACTN1-203ENST00000394419 MS4A6AQ9H2W1 248 aa8.19□□□□□ -1.1
ACTN1-203ENST00000394419 TRAV40A0A0B4J280 105 aa8.19□□□□□ -1.1
ACTN1-203ENST00000394419 UCNP55089 124 aa8.19□□□□□ -1.1
ACTN1-203ENST00000394419 MSRB2Q9Y3D2 182 aa8.19□□□□□ -1.1
ACTN1-203ENST00000394419 HRNRQ86YZ3 2850 aaPredicted RBP8.18□□□□□ -1.1
ACTN1-203ENST00000394419 PKD1L2Q7Z442 2459 aa8.18□□□□□ -1.1
ACTN1-203ENST00000394419 CELSR1Q9NYQ6 3014 aa8.18□□□□□ -1.1
ACTN1-203ENST00000394419 MINOS1Q5TGZ0 78 aa8.18□□□□□ -1.1
ACTN1-203ENST00000394419 GTSCR1Q86UQ5 136 aa8.18□□□□□ -1.1
ACTN1-203ENST00000394419 PCP2Q8IVA1 136 aa8.18□□□□□ -1.1
ACTN1-203ENST00000394419 SCRT2Q9NQ03 307 aa8.18□□□□□ -1.1
ACTN1-203ENST00000394419 CHTOPQ9Y3Y2 248 aaKnown RBP8.18□□□□□ -1.1
ACTN1-203ENST00000394419 SMAD5-AS1Q9Y6J3 95 aa8.18□□□□□ -1.1
ACTN1-203ENST00000394419 MINOS1-NBL1R4GNA1 71 aa8.18□□□□□ -1.1
ACTN1-203ENST00000394419 IGKV3-20P01619 116 aa8.18□□□□□ -1.1
ACTN1-203ENST00000394419 LINC01545Q5VT33 79 aa8.18□□□□□ -1.1
ACTN1-203ENST00000394419 BSNQ9UPA5 3926 aa8.18□□□□□ -1.1
ACTN1-203ENST00000394419 ABCA12Q86UK0 2595 aa8.18□□□□□ -1.1
ACTN1-203ENST00000394419 A0A1W2PPR1 153 aa8.17□□□□□ -1.1
ACTN1-203ENST00000394419 TNFRSF6BO95407 300 aa8.17□□□□□ -1.1
ACTN1-203ENST00000394419 MYOZ3Q8TDC0 251 aa8.17□□□□□ -1.1
ACTN1-203ENST00000394419 TMEM158Q8WZ71 300 aa8.17□□□□□ -1.1
ACTN1-203ENST00000394419 AGPAT4-IT1Q9H0P7 198 aa8.17□□□□□ -1.1
ACTN1-203ENST00000394419 A6NDN8 102 aa8.17□□□□□ -1.1
ACTN1-203ENST00000394419 F8W735 103 aaPredicted RBP8.17□□□□□ -1.1
ACTN1-203ENST00000394419 COX8AP10176 69 aa8.17□□□□□ -1.1
ACTN1-203ENST00000394419 FOXE3Q13461 319 aa8.17□□□□□ -1.1
ACTN1-203ENST00000394419 Q6ZQT7 251 aa8.17□□□□□ -1.1
ACTN1-203ENST00000394419 ODF3BA8MYP8 253 aa8.17□□□□□ -1.1
ACTN1-203ENST00000394419 NPFFO15130 113 aa8.17□□□□□ -1.1
ACTN1-203ENST00000394419 MRPS12O15235 138 aaKnown RBP8.17□□□□□ -1.1
ACTN1-203ENST00000394419 ARL3P36405 182 aa8.17□□□□□ -1.1
ACTN1-203ENST00000394419 K7EMI3 77 aa8.16□□□□□ -1.1
ACTN1-203ENST00000394419 TAX1BP3O14907 124 aa8.16□□□□□ -1.1
ACTN1-203ENST00000394419 EFNA4P52798 201 aa8.16□□□□□ -1.1
ACTN1-203ENST00000394419 PEF1Q9UBV8 284 aaKnown RBP8.16□□□□□ -1.1
ACTN1-203ENST00000394419 F5H697 171 aa8.16□□□□□ -1.1
ACTN1-203ENST00000394419 CRXO43186 299 aaPredicted RBP8.16□□□□□ -1.1
ACTN1-203ENST00000394419 BUB3O43684 328 aa8.16□□□□□ -1.1
ACTN1-203ENST00000394419 UBE2E1P51965 193 aa8.16□□□□□ -1.1
ACTN1-203ENST00000394419 PAX8Q06710 450 aa8.16□□□□□ -1.1
ACTN1-203ENST00000394419 C8orf86Q6ZUL3 223 aa8.16□□□□□ -1.1
ACTN1-203ENST00000394419 DTX2Q86UW9 622 aa8.16□□□□□ -1.1
ACTN1-203ENST00000394419 NAV2Q8IVL1 2488 aa8.16□□□□□ -1.1
ACTN1-203ENST00000394419 NACAE9PAV3 2078 aa8.16□□□□□ -1.1
ACTN1-203ENST00000394419 IGHV2-70DA0A0C4DH43 119 aa8.16□□□□□ -1.1
ACTN1-203ENST00000394419 FAM110DQ8TAY7 271 aaPredicted RBP8.16□□□□□ -1.1
ACTN1-203ENST00000394419 PHLDA3Q9Y5J5 127 aa8.16□□□□□ -1.1
ACTN1-203ENST00000394419 TRAV41A0A0B4J266 112 aa8.15□□□□□ -1.1
ACTN1-203ENST00000394419 OR10J6PQ8NGY7 276 aa8.15□□□□□ -1.1
ACTN1-203ENST00000394419 OOSP1A8MZH6 123 aa8.15□□□□□ -1.1
ACTN1-203ENST00000394419 HTN1P15515 57 aa8.15□□□□□ -1.1
ACTN1-203ENST00000394419 RNASE4P34096 147 aaKnown RBP8.15□□□□□ -1.1
ACTN1-203ENST00000394419 ZNF502Q8TBZ5 544 aa8.15□□□□□ -1.1
ACTN1-203ENST00000394419 SLC50A1Q9BRV3 221 aa8.15□□□□□ -1.1
ACTN1-203ENST00000394419 CSTL1Q9H114 145 aa8.15□□□□□ -1.1
ACTN1-203ENST00000394419 F6UB75 175 aa8.15□□□□□ -1.11
ACTN1-203ENST00000394419 GNLYP22749 145 aa8.15□□□□□ -1.11
ACTN1-203ENST00000394419 RAB9AP51151 201 aa8.15□□□□□ -1.11
ACTN1-203ENST00000394419 RPL24P83731 157 aaKnown RBP8.15□□□□□ -1.11
ACTN1-203ENST00000394419 FBXL19-AS1Q494R0 122 aa8.15□□□□□ -1.11
ACTN1-203ENST00000394419 ZC2HC1BQ5TFG8 222 aa8.15□□□□□ -1.11
ACTN1-203ENST00000394419 PIP4P2Q8N4L2 257 aa8.15□□□□□ -1.11
ACTN1-203ENST00000394419 DEFB125Q8N687 156 aa8.15□□□□□ -1.11
ACTN1-203ENST00000394419 PAX2Q02962 417 aa8.14□□□□□ -1.11
ACTN1-203ENST00000394419 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.14□□□□□ -1.11
ACTN1-203ENST00000394419 SMAD7O15105 426 aaKnown RBP8.14□□□□□ -1.11
ACTN1-203ENST00000394419 CD5LO43866 347 aa8.14□□□□□ -1.11
ACTN1-203ENST00000394419 KIR3DS1Q14943 382 aa8.14□□□□□ -1.11
ACTN1-203ENST00000394419 COL25A1Q9BXS0 654 aaPredicted RBP8.14□□□□□ -1.11
ACTN1-203ENST00000394419 GAGE12BA1L429 117 aa8.13□□□□□ -1.11
ACTN1-203ENST00000394419 IGF1P05019 195 aa8.13□□□□□ -1.11
ACTN1-203ENST00000394419 SMIM17P0DL12 118 aa8.13□□□□□ -1.11
ACTN1-203ENST00000394419 GTF2H5Q6ZYL4 71 aa8.13□□□□□ -1.11
ACTN1-203ENST00000394419 C14orf178Q8N769 122 aaPredicted RBP8.13□□□□□ -1.11
ACTN1-203ENST00000394419 NXT2Q9NPJ8 142 aaKnown RBP8.13□□□□□ -1.11
ACTN1-203ENST00000394419 TRBV6-1A0A0K0K1D8 114 aa8.13□□□□□ -1.11
ACTN1-203ENST00000394419 CENPVL3A0A0U1RRI6 287 aa8.13□□□□□ -1.11
ACTN1-203ENST00000394419 H3BUX3 64 aa8.13□□□□□ -1.11
ACTN1-203ENST00000394419 K7EP13 123 aa8.13□□□□□ -1.11
ACTN1-203ENST00000394419 PPBPP02775 128 aa8.13□□□□□ -1.11
ACTN1-203ENST00000394419 ATP5J2P56134 94 aa8.13□□□□□ -1.11
ACTN1-203ENST00000394419 OR2K2Q8NGT1 345 aa8.13□□□□□ -1.11
ACTN1-203ENST00000394419 CCDC140Q96MF4 163 aa8.13□□□□□ -1.11
ACTN1-203ENST00000394419 SIRPDQ9H106 197 aa8.13□□□□□ -1.11
ACTN1-203ENST00000394419 TMEM238LA0A1B0GVL6 79 aa8.13□□□□□ -1.11
ACTN1-203ENST00000394419 TRBV12-3P01733 135 aa8.13□□□□□ -1.11
ACTN1-203ENST00000394419 LGALS9BQ3B8N2 356 aa8.13□□□□□ -1.11
ACTN1-203ENST00000394419 LGALS9CQ6DKI2 356 aa8.13□□□□□ -1.11
ACTN1-203ENST00000394419 NHP2Q9NX24 153 aaKnown RBP8.13□□□□□ -1.11
ACTN1-203ENST00000394419 FLNCQ14315 2725 aa8.13□□□□□ -1.11
ACTN1-203ENST00000394419 A0A096LNJ9 63 aa8.12□□□□□ -1.11
ACTN1-203ENST00000394419 TMEM8BA6NDV4 472 aa8.12□□□□□ -1.11
ACTN1-203ENST00000394419 C11orf71Q6IPW1 123 aa8.12□□□□□ -1.11
ACTN1-203ENST00000394419 ZNF493Q6ZR52 646 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 451.4 ms