RNA–Protein interactions for RNA: ENST00000394157.7

PSEN1-203, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 1,249 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-203ENST00000394157 TM2D3Q9BRN9 247 aa14.11□□□□□ -0.15
PSEN1-203ENST00000394157 PGPEP1Q9NXJ5 209 aa14.11□□□□□ -0.15
PSEN1-203ENST00000394157 COX8CQ7Z4L0 72 aa14.1□□□□□ -0.15
PSEN1-203ENST00000394157 GOLT1BQ9Y3E0 138 aa14.1□□□□□ -0.15
PSEN1-203ENST00000394157 C7orf71A4D174 169 aa14.09□□□□□ -0.15
PSEN1-203ENST00000394157 SPRY2O43597 315 aa14.09□□□□□ -0.15
PSEN1-203ENST00000394157 DEFB135Q30KP9 77 aa14.09□□□□□ -0.15
PSEN1-203ENST00000394157 SMUG1Q53HV7 270 aa14.09□□□□□ -0.15
PSEN1-203ENST00000394157 GFI1BQ5VTD9 330 aa14.09□□□□□ -0.15
PSEN1-203ENST00000394157 TVP23CQ96ET8 276 aa14.09□□□□□ -0.15
PSEN1-203ENST00000394157 SMIM12Q96EX1 92 aa14.09□□□□□ -0.15
PSEN1-203ENST00000394157 ZMAT4Q9H898 229 aa14.09□□□□□ -0.15
PSEN1-203ENST00000394157 TRAV12-2A0A075B6T6 113 aa14.08□□□□□ -0.16
PSEN1-203ENST00000394157 SRP19P09132 144 aaKnown RBP14.08□□□□□ -0.16
PSEN1-203ENST00000394157 BAGE2Q86Y30 109 aa14.08□□□□□ -0.16
PSEN1-203ENST00000394157 TMEM183AQ8IXX5 376 aa14.08□□□□□ -0.16
PSEN1-203ENST00000394157 NIPSNAP3BQ9BS92 247 aa14.08□□□□□ -0.16
PSEN1-203ENST00000394157 DERL1Q9BUN8 251 aa14.08□□□□□ -0.16
PSEN1-203ENST00000394157 RNASE4P34096 147 aaKnown RBP14.07□□□□□ -0.16
PSEN1-203ENST00000394157 Q6AWC8 147 aa14.07□□□□□ -0.16
PSEN1-203ENST00000394157 ZNF705AQ6ZN79 300 aaPredicted RBP14.07□□□□□ -0.16
PSEN1-203ENST00000394157 ASCL2Q99929 193 aa14.07□□□□□ -0.16
PSEN1-203ENST00000394157 C9JCJ5 164 aa14.06□□□□□ -0.16
PSEN1-203ENST00000394157 H7BYZ3 331 aa14.06□□□□□ -0.16
PSEN1-203ENST00000394157 J3KRW8 73 aa14.06□□□□□ -0.16
PSEN1-203ENST00000394157 GNG4P50150 75 aa14.06□□□□□ -0.16
PSEN1-203ENST00000394157 KIR3DS1Q14943 382 aa14.06□□□□□ -0.16
PSEN1-203ENST00000394157 UQCC3Q6UW78 93 aa14.06□□□□□ -0.16
PSEN1-203ENST00000394157 C1orf158Q8N1D5 194 aa14.06□□□□□ -0.16
PSEN1-203ENST00000394157 NEU1Q99519 415 aa14.06□□□□□ -0.16
PSEN1-203ENST00000394157 OVOL2Q9BRP0 275 aa14.06□□□□□ -0.16
PSEN1-203ENST00000394157 TMEM208Q9BTX3 173 aa14.06□□□□□ -0.16
PSEN1-203ENST00000394157 PARLQ9H300 379 aa14.06□□□□□ -0.16
PSEN1-203ENST00000394157 TRAV12-3A0A0B4J271 114 aa14.05□□□□□ -0.16
PSEN1-203ENST00000394157 TRAV21A0A0B4J279 112 aa14.05□□□□□ -0.16
PSEN1-203ENST00000394157 LINC00862A6NCI5 91 aa14.05□□□□□ -0.16
PSEN1-203ENST00000394157 SMIM9A6NGZ8 99 aa14.05□□□□□ -0.16
PSEN1-203ENST00000394157 ZNF324O75467 553 aaPredicted RBP14.05□□□□□ -0.16
PSEN1-203ENST00000394157 BTN1A1Q13410 526 aa14.05□□□□□ -0.16
PSEN1-203ENST00000394157 FAM74A3Q4VXF1 159 aa14.05□□□□□ -0.16
PSEN1-203ENST00000394157 CENPWQ5EE01 88 aa14.05□□□□□ -0.16
PSEN1-203ENST00000394157 PRR9Q5T870 116 aa14.05□□□□□ -0.16
PSEN1-203ENST00000394157 C8orf49Q96NF6 230 aa14.05□□□□□ -0.16
PSEN1-203ENST00000394157 MLST8Q9BVC4 326 aa14.05□□□□□ -0.16
PSEN1-203ENST00000394157 GCGP01275 180 aa14.04□□□□□ -0.16
PSEN1-203ENST00000394157 PFN1P07737 140 aaKnown RBP14.04□□□□□ -0.16
PSEN1-203ENST00000394157 SRSF3P84103 164 aaKnown RBP14.04□□□□□ -0.16
PSEN1-203ENST00000394157 EIF4E3Q8N5X7 224 aaKnown RBP14.04□□□□□ -0.16
PSEN1-203ENST00000394157 PYGO2Q9BRQ0 406 aa14.04□□□□□ -0.16
PSEN1-203ENST00000394157 LINC00467Q9BRT7 94 aa14.04□□□□□ -0.16
PSEN1-203ENST00000394157 BIN3Q9NQY0 253 aa14.04□□□□□ -0.16
PSEN1-203ENST00000394157 CEBPGP53567 150 aa14.03□□□□□ -0.16
PSEN1-203ENST00000394157 ZNF674Q2M3X9 581 aa14.03□□□□□ -0.16
PSEN1-203ENST00000394157 OR11H2Q8NH07 326 aa14.03□□□□□ -0.16
PSEN1-203ENST00000394157 LINC01587Q99440 93 aa14.03□□□□□ -0.16
PSEN1-203ENST00000394157 LY96Q9Y6Y9 160 aa14.03□□□□□ -0.16
PSEN1-203ENST00000394157 FABP5P3A8MUU1 101 aa14.02□□□□□ -0.17
PSEN1-203ENST00000394157 C9JQL5 133 aa14.02□□□□□ -0.17
PSEN1-203ENST00000394157 RBMY1A1P0DJD3 496 aaKnown RBP14.02□□□□□ -0.17
PSEN1-203ENST00000394157 RBMY1CP0DJD4 496 aa14.02□□□□□ -0.17
PSEN1-203ENST00000394157 MIFP14174 115 aa14.02□□□□□ -0.17
PSEN1-203ENST00000394157 RBMY1FQ15415 496 aaKnown RBP14.02□□□□□ -0.17
PSEN1-203ENST00000394157 FAM162BQ5T6X4 162 aa14.02□□□□□ -0.17
PSEN1-203ENST00000394157 ZC2HC1AQ96GY0 325 aa14.02□□□□□ -0.17
PSEN1-203ENST00000394157 SMIM7Q9BQ49 75 aa14.02□□□□□ -0.17
PSEN1-203ENST00000394157 NBEAL2Q6ZNJ1 2754 aa14.02□□□□□ -0.17
PSEN1-203ENST00000394157 TRBV20OR9-2A0A075B6H5 130 aa14.01□□□□□ -0.17
PSEN1-203ENST00000394157 IGHV3OR16-12A0A075B7B8 117 aa14.01□□□□□ -0.17
PSEN1-203ENST00000394157 ZNF727A8MUV8 499 aa14.01□□□□□ -0.17
PSEN1-203ENST00000394157 SOHLH1Q5JUK2 328 aa14.01□□□□□ -0.17
PSEN1-203ENST00000394157 COMMD7Q86VX2 200 aa14.01□□□□□ -0.17
PSEN1-203ENST00000394157 X6R8D5 127 aa14.01□□□□□ -0.17
PSEN1-203ENST00000394157 ZNF80P51504 273 aaPredicted RBP14□□□□□ -0.17
PSEN1-203ENST00000394157 RRN3P1Q2M238 152 aa14□□□□□ -0.17
PSEN1-203ENST00000394157 TDRG1Q3Y452 100 aa14□□□□□ -0.17
PSEN1-203ENST00000394157 KCNS1Q96KK3 526 aa14□□□□□ -0.17
PSEN1-203ENST00000394157 RETNQ9HD89 108 aa14□□□□□ -0.17
PSEN1-203ENST00000394157 IGHV1OR15-1A0A075B7D0 117 aa13.99□□□□□ -0.17
PSEN1-203ENST00000394157 IGLV2-8P01709 118 aa13.99□□□□□ -0.17
PSEN1-203ENST00000394157 FAM159AQ6UWV7 190 aa13.99□□□□□ -0.17
PSEN1-203ENST00000394157 ZNF493Q6ZR52 646 aa13.99□□□□□ -0.17
PSEN1-203ENST00000394157 NHLRC2Q8NBF2 726 aa13.99□□□□□ -0.17
PSEN1-203ENST00000394157 PRKDCP78527 4128 aaKnown RBP13.99□□□□□ -0.17
PSEN1-203ENST00000394157 ANXA2RQ3ZCQ2 193 aa13.98□□□□□ -0.17
PSEN1-203ENST00000394157 LINC00528Q8N1L1 170 aa13.98□□□□□ -0.17
PSEN1-203ENST00000394157 TMEM189A5PLL7 270 aa13.97□□□□□ -0.17
PSEN1-203ENST00000394157 SFTA3P0C7M3 94 aa13.97□□□□□ -0.17
PSEN1-203ENST00000394157 MGST1P10620 155 aaKnown RBP13.97□□□□□ -0.17
PSEN1-203ENST00000394157 CRIP1P50238 77 aa13.97□□□□□ -0.17
PSEN1-203ENST00000394157 TMEM241Q24JQ0 296 aa13.97□□□□□ -0.17
PSEN1-203ENST00000394157 OCC1Q8TAD7 63 aa13.97□□□□□ -0.17
PSEN1-203ENST00000394157 SH2D1AO60880 128 aa13.96□□□□□ -0.17
PSEN1-203ENST00000394157 Q8NAQ8 132 aa13.96□□□□□ -0.17
PSEN1-203ENST00000394157 TMEM263Q8WUH6 116 aaKnown RBP13.96□□□□□ -0.17
PSEN1-203ENST00000394157 C16orf74Q96GX8 76 aa13.96□□□□□ -0.17
PSEN1-203ENST00000394157 C11orf68Q9H3H3 251 aaKnown RBP13.96□□□□□ -0.17
PSEN1-203ENST00000394157 NAT8Q9UHE5 227 aa13.96□□□□□ -0.17
PSEN1-203ENST00000394157 TRGV11A0A075B6L2 103 aa13.95□□□□□ -0.18
PSEN1-203ENST00000394157 PGPEP1LA6NFU8 196 aa13.95□□□□□ -0.18
PSEN1-203ENST00000394157 CBY3A6NI87 242 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms