RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 IFITM5A6NNB3 132 aa-0.51□□□□□ -2.49
SNORD28B-201ENST00000390993 KPNA4O00629 521 aaPredicted RBP-0.51□□□□□ -2.49
SNORD28B-201ENST00000390993 SPTBN2O15020 2390 aa-0.51□□□□□ -2.49
SNORD28B-201ENST00000390993 SERPINA1P01009 418 aa-0.51□□□□□ -2.49
SNORD28B-201ENST00000390993 SAA1P0DJI8 122 aaPredicted RBP-0.51□□□□□ -2.49
SNORD28B-201ENST00000390993 BCL2P10415 239 aa-0.51□□□□□ -2.49
SNORD28B-201ENST00000390993 BLMP54132 1417 aaPredicted RBP-0.51□□□□□ -2.49
SNORD28B-201ENST00000390993 RHOHQ15669 191 aa-0.51□□□□□ -2.49
SNORD28B-201ENST00000390993 MSMO1Q15800 293 aa-0.51□□□□□ -2.49
SNORD28B-201ENST00000390993 AKIRIN2Q53H80 203 aa-0.51□□□□□ -2.49
SNORD28B-201ENST00000390993 PTRHD1Q6GMV3 140 aaKnown RBP-0.51□□□□□ -2.49
SNORD28B-201ENST00000390993 LYPD5Q6UWN5 251 aa-0.51□□□□□ -2.49
SNORD28B-201ENST00000390993 TRPM1Q7Z4N2 1603 aa-0.51□□□□□ -2.49
SNORD28B-201ENST00000390993 SMIM11BQ8TCY0 68 aa-0.51□□□□□ -2.49
SNORD28B-201ENST00000390993 CTTNBP2Q8WZ74 1663 aa-0.51□□□□□ -2.49
SNORD28B-201ENST00000390993 AP3S1Q92572 193 aa-0.51□□□□□ -2.49
SNORD28B-201ENST00000390993 TMEM141Q96I45 108 aa-0.51□□□□□ -2.49
SNORD28B-201ENST00000390993 LLPHQ9BRT6 129 aaKnown RBP-0.51□□□□□ -2.49
SNORD28B-201ENST00000390993 PBDC1Q9BVG4 233 aa-0.51□□□□□ -2.49
SNORD28B-201ENST00000390993 PYCARDQ9ULZ3 195 aa-0.51□□□□□ -2.49
SNORD28B-201ENST00000390993 SSR3Q9UNL2 185 aa-0.51□□□□□ -2.49
SNORD28B-201ENST00000390993 ARL2BPQ9Y2Y0 163 aa-0.51□□□□□ -2.49
SNORD28B-201ENST00000390993 PDZD2O15018 2839 aa-0.51□□□□□ -2.49
SNORD28B-201ENST00000390993 UBR2Q8IWV8 1755 aa-0.52□□□□□ -2.49
SNORD28B-201ENST00000390993 CCDC144AA2RUR9 1427 aa-0.52□□□□□ -2.49
SNORD28B-201ENST00000390993 ADGRL3Q9HAR2 1447 aa-0.52□□□□□ -2.49
SNORD28B-201ENST00000390993 TRAV17A0A0B4J275 112 aa-0.52□□□□□ -2.49
SNORD28B-201ENST00000390993 LOC107986453A0A1B0GWG9 222 aa-0.52□□□□□ -2.49
SNORD28B-201ENST00000390993 H3BQV1 296 aa-0.52□□□□□ -2.49
SNORD28B-201ENST00000390993 M0R3E3 92 aa-0.52□□□□□ -2.49
SNORD28B-201ENST00000390993 IFNA21P01568 189 aa-0.52□□□□□ -2.49
SNORD28B-201ENST00000390993 CCKP06307 115 aa-0.52□□□□□ -2.49
SNORD28B-201ENST00000390993 S100A6P06703 90 aa-0.52□□□□□ -2.49
SNORD28B-201ENST00000390993 INSL3P51460 131 aa-0.52□□□□□ -2.49
SNORD28B-201ENST00000390993 GTF2A1P52655 376 aaPredicted RBP-0.52□□□□□ -2.49
SNORD28B-201ENST00000390993 LSM3P62310 102 aaKnown RBP-0.52□□□□□ -2.49
SNORD28B-201ENST00000390993 WFDC2Q14508 124 aa-0.52□□□□□ -2.49
SNORD28B-201ENST00000390993 IQCJQ1A5X6 159 aa-0.52□□□□□ -2.49
SNORD28B-201ENST00000390993 AKR1C8PQ5T2L2 129 aa-0.52□□□□□ -2.49
SNORD28B-201ENST00000390993 PHF5AQ7RTV0 110 aaKnown RBP-0.52□□□□□ -2.49
SNORD28B-201ENST00000390993 PPP1R14BQ96C90 147 aa-0.52□□□□□ -2.49
SNORD28B-201ENST00000390993 GPX7Q96SL4 187 aaPredicted RBP-0.52□□□□□ -2.49
SNORD28B-201ENST00000390993 SMIM7Q9BQ49 75 aa-0.52□□□□□ -2.49
SNORD28B-201ENST00000390993 VPS25Q9BRG1 176 aa-0.52□□□□□ -2.49
SNORD28B-201ENST00000390993 C9orf16Q9BUW7 83 aa-0.52□□□□□ -2.49
SNORD28B-201ENST00000390993 RTL8AQ9BWD3 113 aa-0.52□□□□□ -2.49
SNORD28B-201ENST00000390993 CYP4F30PQ9H0H9 118 aa-0.52□□□□□ -2.49
SNORD28B-201ENST00000390993 COMMD3Q9UBI1 195 aa-0.52□□□□□ -2.49
SNORD28B-201ENST00000390993 LAMTOR3Q9UHA4 124 aa-0.52□□□□□ -2.49
SNORD28B-201ENST00000390993 MPC1Q9Y5U8 109 aa-0.52□□□□□ -2.49
SNORD28B-201ENST00000390993 TRPM7Q96QT4 1865 aa-0.52□□□□□ -2.49
SNORD28B-201ENST00000390993 CDK12Q9NYV4 1490 aaPredicted RBP-0.53□□□□□ -2.49
SNORD28B-201ENST00000390993 FGD6Q6ZV73 1430 aa-0.53□□□□□ -2.49
SNORD28B-201ENST00000390993 A0A0D9SFI3 127 aa-0.53□□□□□ -2.49
SNORD28B-201ENST00000390993 RBAKDNA6NC62 111 aa-0.53□□□□□ -2.49
SNORD28B-201ENST00000390993 ZNF670-ZNF695F2Z2N8 137 aa-0.53□□□□□ -2.49
SNORD28B-201ENST00000390993 EDF1O60869 148 aaKnown RBP-0.53□□□□□ -2.49
SNORD28B-201ENST00000390993 PYYP10082 97 aa-0.53□□□□□ -2.49
SNORD28B-201ENST00000390993 IL7P13232 177 aa-0.53□□□□□ -2.49
SNORD28B-201ENST00000390993 POU6F1Q14863 301 aa-0.53□□□□□ -2.49
SNORD28B-201ENST00000390993 RTL8BQ17RB0 113 aa-0.53□□□□□ -2.49
SNORD28B-201ENST00000390993 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.53□□□□□ -2.49
SNORD28B-201ENST00000390993 OR5H6Q8NGV6 325 aa-0.53□□□□□ -2.49
SNORD28B-201ENST00000390993 CCL4L1Q8NHW4 92 aa-0.53□□□□□ -2.49
SNORD28B-201ENST00000390993 CLEC2BQ92478 149 aa-0.53□□□□□ -2.49
SNORD28B-201ENST00000390993 PHB2Q99623 299 aa-0.53□□□□□ -2.49
SNORD28B-201ENST00000390993 PAIP2Q9BPZ3 127 aaKnown RBP-0.53□□□□□ -2.49
SNORD28B-201ENST00000390993 LYRM2Q9NU23 88 aaPredicted RBP-0.53□□□□□ -2.49
SNORD28B-201ENST00000390993 TMEM242Q9NWH2 141 aa-0.53□□□□□ -2.49
SNORD28B-201ENST00000390993 SLC22A13Q9Y226 551 aa-0.53□□□□□ -2.49
SNORD28B-201ENST00000390993 ASB4Q9Y574 426 aa-0.53□□□□□ -2.49
SNORD28B-201ENST00000390993 PIK3C2AO00443 1686 aa-0.53□□□□□ -2.49
SNORD28B-201ENST00000390993 FRMPD1Q5SYB0 1578 aa-0.53□□□□□ -2.49
SNORD28B-201ENST00000390993 IGKCP01834 107 aa-0.54□□□□□ -2.5
SNORD28B-201ENST00000390993 COX4I1P13073 169 aa-0.54□□□□□ -2.5
SNORD28B-201ENST00000390993 POLR2JP52435 117 aaKnown RBP-0.54□□□□□ -2.5
SNORD28B-201ENST00000390993 MAXP61244 160 aa-0.54□□□□□ -2.5
SNORD28B-201ENST00000390993 LSM6P62312 80 aaKnown RBP-0.54□□□□□ -2.5
SNORD28B-201ENST00000390993 GNG5P63218 68 aa-0.54□□□□□ -2.5
SNORD28B-201ENST00000390993 CCL7P80098 99 aa-0.54□□□□□ -2.5
SNORD28B-201ENST00000390993 ITGB3BPQ13352 177 aaPredicted RBP-0.54□□□□□ -2.5
SNORD28B-201ENST00000390993 NUP35Q8NFH5 326 aa-0.54□□□□□ -2.5
SNORD28B-201ENST00000390993 PRELID3AQ96N28 172 aa-0.54□□□□□ -2.5
SNORD28B-201ENST00000390993 NHSL1Q5SYE7 1610 aa-0.54□□□□□ -2.5
SNORD28B-201ENST00000390993 ANK1P16157 1881 aa-0.54□□□□□ -2.5
SNORD28B-201ENST00000390993 MAP2P11137 1827 aaKnown RBP-0.54□□□□□ -2.5
SNORD28B-201ENST00000390993 KIAA1549LQ6ZVL6 1849 aa-0.54□□□□□ -2.5
SNORD28B-201ENST00000390993 CD109Q6YHK3 1445 aa-0.55□□□□□ -2.5
SNORD28B-201ENST00000390993 MAP1BP46821 2468 aaKnown RBP-0.55□□□□□ -2.5
SNORD28B-201ENST00000390993 COL6A3P12111 3177 aa-0.55□□□□□ -2.5
SNORD28B-201ENST00000390993 TENM2Q9NT68 2774 aa-0.55□□□□□ -2.5
SNORD28B-201ENST00000390993 GVQW2A0A096LPI5 108 aaPredicted RBP-0.55□□□□□ -2.5
SNORD28B-201ENST00000390993 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.55□□□□□ -2.5
SNORD28B-201ENST00000390993 TRBV10-1A0A0K0K1A3 114 aa-0.55□□□□□ -2.5
SNORD28B-201ENST00000390993 CDC42EP2O14613 210 aa-0.55□□□□□ -2.5
SNORD28B-201ENST00000390993 ATG12O94817 140 aa-0.55□□□□□ -2.5
SNORD28B-201ENST00000390993 C1QBP02746 253 aa-0.55□□□□□ -2.5
SNORD28B-201ENST00000390993 CST2P09228 141 aa-0.55□□□□□ -2.5
SNORD28B-201ENST00000390993 FABP2P12104 132 aa-0.55□□□□□ -2.5
SNORD28B-201ENST00000390993 SPAG11BQ08648 103 aa-0.55□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms