RNA–Protein interactions for RNA: ENST00000390498.1

TRAJ39-201, Transcript of T cell receptor alpha joining 39, humanhuman

APPRIS P1 BASIC

Gene TRAJ39, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ39-201ENST00000390498 HIST1H1DP16402 221 aaKnown RBP0.82□□□□□ -2.28
TRAJ39-201ENST00000390498 GNG4P50150 75 aa0.82□□□□□ -2.28
TRAJ39-201ENST00000390498 MIR22HGQ0VDD5 57 aa0.82□□□□□ -2.28
TRAJ39-201ENST00000390498 MEIG1Q5JSS6 88 aa0.82□□□□□ -2.28
TRAJ39-201ENST00000390498 C10orf55Q5SWW7 151 aa0.82□□□□□ -2.28
TRAJ39-201ENST00000390498 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.82□□□□□ -2.28
TRAJ39-201ENST00000390498 FOXI2Q6ZQN5 318 aa0.82□□□□□ -2.28
TRAJ39-201ENST00000390498 FP248Q71RG6 208 aaPredicted RBP0.82□□□□□ -2.28
TRAJ39-201ENST00000390498 GKN2Q86XP6 184 aa0.82□□□□□ -2.28
TRAJ39-201ENST00000390498 ARL17AQ8IVW1 177 aa0.82□□□□□ -2.28
TRAJ39-201ENST00000390498 VSTM2AQ8TAG5 236 aa0.82□□□□□ -2.28
TRAJ39-201ENST00000390498 PATE1Q8WXA2 126 aa0.82□□□□□ -2.28
TRAJ39-201ENST00000390498 PP6455Q8WZ26 134 aa0.82□□□□□ -2.28
TRAJ39-201ENST00000390498 PPP3R2Q96LZ3 170 aa0.82□□□□□ -2.28
TRAJ39-201ENST00000390498 SPANXDQ9BXN6 97 aa0.82□□□□□ -2.28
TRAJ39-201ENST00000390498 NAA60Q9H7X0 242 aa0.82□□□□□ -2.28
TRAJ39-201ENST00000390498 SCN3BQ9NY72 215 aa0.82□□□□□ -2.28
TRAJ39-201ENST00000390498 TAS2R8Q9NYW2 309 aa0.82□□□□□ -2.28
TRAJ39-201ENST00000390498 ORMDL1Q9P0S3 153 aa0.82□□□□□ -2.28
TRAJ39-201ENST00000390498 BOKQ9UMX3 212 aaPredicted RBP0.82□□□□□ -2.28
TRAJ39-201ENST00000390498 NOP16Q9Y3C1 178 aaKnown RBP0.82□□□□□ -2.28
TRAJ39-201ENST00000390498 STRCP1A6NGW2 1772 aa0.82□□□□□ -2.28
TRAJ39-201ENST00000390498 MGAMO43451 1857 aa0.82□□□□□ -2.28
TRAJ39-201ENST00000390498 MYH1P12882 1939 aa0.81□□□□□ -2.28
TRAJ39-201ENST00000390498 POLEQ07864 2286 aa0.81□□□□□ -2.28
TRAJ39-201ENST00000390498 A2ML1A8K2U0 1454 aa0.81□□□□□ -2.28
TRAJ39-201ENST00000390498 CFTRP13569 1480 aa0.81□□□□□ -2.28
TRAJ39-201ENST00000390498 MYOM2P54296 1465 aa0.81□□□□□ -2.28
TRAJ39-201ENST00000390498 LAMB4A4D0S4 1761 aa0.81□□□□□ -2.28
TRAJ39-201ENST00000390498 KIDINS220Q9ULH0 1771 aa0.81□□□□□ -2.28
TRAJ39-201ENST00000390498 KIAA1549LQ6ZVL6 1849 aa0.81□□□□□ -2.28
TRAJ39-201ENST00000390498 TRBV6-8A0A0A6YYG3 113 aa0.81□□□□□ -2.28
TRAJ39-201ENST00000390498 LOC100130705A0A1B0GUX0 176 aa0.81□□□□□ -2.28
TRAJ39-201ENST00000390498 C20orf202A1L168 122 aa0.81□□□□□ -2.28
TRAJ39-201ENST00000390498 M0R129 80 aa0.81□□□□□ -2.28
TRAJ39-201ENST00000390498 CCL16O15467 120 aa0.81□□□□□ -2.28
TRAJ39-201ENST00000390498 PITX3O75364 302 aa0.81□□□□□ -2.28
TRAJ39-201ENST00000390498 IGHV3-33P01772 117 aa0.81□□□□□ -2.28
TRAJ39-201ENST00000390498 IGKV4-1P06312 121 aa0.81□□□□□ -2.28
TRAJ39-201ENST00000390498 RNASE3P12724 160 aaKnown RBP0.81□□□□□ -2.28
TRAJ39-201ENST00000390498 ADCYAP1P18509 176 aa0.81□□□□□ -2.28
TRAJ39-201ENST00000390498 RBP2P50120 134 aa0.81□□□□□ -2.28
TRAJ39-201ENST00000390498 FAM74A1Q5RGS3 127 aa0.81□□□□□ -2.28
TRAJ39-201ENST00000390498 MIC13Q5XKP0 118 aa0.81□□□□□ -2.28
TRAJ39-201ENST00000390498 KRTAP5-3Q6L8H2 238 aa0.81□□□□□ -2.28
TRAJ39-201ENST00000390498 ZCCHC23Q6ZST2 131 aa0.81□□□□□ -2.28
TRAJ39-201ENST00000390498 SLC25A26Q70HW3 274 aa0.81□□□□□ -2.28
TRAJ39-201ENST00000390498 COA5Q86WW8 74 aa0.81□□□□□ -2.28
TRAJ39-201ENST00000390498 SNX29P2Q8IUI4 249 aa0.81□□□□□ -2.28
TRAJ39-201ENST00000390498 C14orf144Q96I85 54 aa0.81□□□□□ -2.28
TRAJ39-201ENST00000390498 LINC00052Q96N35 136 aa0.81□□□□□ -2.28
TRAJ39-201ENST00000390498 AGPAT4-IT1Q9H0P7 198 aa0.81□□□□□ -2.28
TRAJ39-201ENST00000390498 TMEM106BQ9NUM4 274 aa0.81□□□□□ -2.28
TRAJ39-201ENST00000390498 SHANK1Q9Y566 2161 aa0.81□□□□□ -2.28
TRAJ39-201ENST00000390498 MYH7P12883 1935 aa0.81□□□□□ -2.28
TRAJ39-201ENST00000390498 CUL7Q14999 1698 aa0.81□□□□□ -2.28
TRAJ39-201ENST00000390498 VPS8Q8N3P4 1428 aa0.81□□□□□ -2.28
TRAJ39-201ENST00000390498 CECR2Q9BXF3 1484 aa0.8□□□□□ -2.28
TRAJ39-201ENST00000390498 NCKAP5O14513 1909 aa0.8□□□□□ -2.28
TRAJ39-201ENST00000390498 TANC2Q9HCD6 1990 aa0.8□□□□□ -2.28
TRAJ39-201ENST00000390498 TRBV6-5A0A0K0K1A5 114 aa0.8□□□□□ -2.28
TRAJ39-201ENST00000390498 SPAARA0A1B0GVQ0 90 aa0.8□□□□□ -2.28
TRAJ39-201ENST00000390498 TRBV6-4A0A1B0GX49 114 aa0.8□□□□□ -2.28
TRAJ39-201ENST00000390498 F8W1H4 67 aa0.8□□□□□ -2.28
TRAJ39-201ENST00000390498 H3BRM9 83 aa0.8□□□□□ -2.28
TRAJ39-201ENST00000390498 CCDC179H3BU77 68 aa0.8□□□□□ -2.28
TRAJ39-201ENST00000390498 J3QRE1 110 aa0.8□□□□□ -2.28
TRAJ39-201ENST00000390498 TNFP01375 233 aa0.8□□□□□ -2.28
TRAJ39-201ENST00000390498 S100A8P05109 93 aa0.8□□□□□ -2.28
TRAJ39-201ENST00000390498 TPPP2P59282 170 aa0.8□□□□□ -2.28
TRAJ39-201ENST00000390498 KRTAP10-8P60410 259 aa0.8□□□□□ -2.28
TRAJ39-201ENST00000390498 PPP3R1P63098 170 aa0.8□□□□□ -2.28
TRAJ39-201ENST00000390498 Q56UQ5 140 aa0.8□□□□□ -2.28
TRAJ39-201ENST00000390498 LCE1EQ5T753 118 aa0.8□□□□□ -2.28
TRAJ39-201ENST00000390498 TEX261Q6UWH6 196 aa0.8□□□□□ -2.28
TRAJ39-201ENST00000390498 BRD3OSQ6XYD6 125 aa0.8□□□□□ -2.28
TRAJ39-201ENST00000390498 LINC00299Q6ZSB3 139 aa0.8□□□□□ -2.28
TRAJ39-201ENST00000390498 C3orf62Q6ZUJ4 267 aa0.8□□□□□ -2.28
TRAJ39-201ENST00000390498 C5orf17Q8NAS9 161 aa0.8□□□□□ -2.28
TRAJ39-201ENST00000390498 DYNLRB2Q8TF09 96 aa0.8□□□□□ -2.28
TRAJ39-201ENST00000390498 PPDPFLQ8WWR9 84 aa0.8□□□□□ -2.28
TRAJ39-201ENST00000390498 KRTAP17-1Q9BYP8 105 aa0.8□□□□□ -2.28
TRAJ39-201ENST00000390498 COA4Q9NYJ1 87 aa0.8□□□□□ -2.28
TRAJ39-201ENST00000390498 KLK9Q9UKQ9 250 aa0.8□□□□□ -2.28
TRAJ39-201ENST00000390498 ZFP30Q9Y2G7 519 aa0.8□□□□□ -2.28
TRAJ39-201ENST00000390498 IER3IP1Q9Y5U9 82 aa0.8□□□□□ -2.28
TRAJ39-201ENST00000390498 SERP1Q9Y6X1 66 aa0.8□□□□□ -2.28
TRAJ39-201ENST00000390498 QRICH2Q9H0J4 1663 aa0.8□□□□□ -2.28
TRAJ39-201ENST00000390498 KIAA2026Q5HYC2 2103 aa0.8□□□□□ -2.28
TRAJ39-201ENST00000390498 CUL9Q8IWT3 2517 aa0.8□□□□□ -2.28
TRAJ39-201ENST00000390498 KTN1Q86UP2 1357 aaKnown RBP0.8□□□□□ -2.28
TRAJ39-201ENST00000390498 PLXNA4Q9HCM2 1894 aa0.8□□□□□ -2.28
TRAJ39-201ENST00000390498 MYH6P13533 1939 aa0.79□□□□□ -2.28
TRAJ39-201ENST00000390498 ATG2AQ2TAZ0 1938 aa0.79□□□□□ -2.28
TRAJ39-201ENST00000390498 MAPKBP1O60336 1514 aa0.79□□□□□ -2.28
TRAJ39-201ENST00000390498 A0A1W2PRS3 328 aa0.79□□□□□ -2.28
TRAJ39-201ENST00000390498 MCRIP1C9JLW8 97 aa0.79□□□□□ -2.28
TRAJ39-201ENST00000390498 GEMIN2O14893 280 aaKnown RBP0.79□□□□□ -2.28
TRAJ39-201ENST00000390498 NUPR1O60356 82 aa0.79□□□□□ -2.28
TRAJ39-201ENST00000390498 MRPS14O60783 128 aaKnown RBP0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms