RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 SMCR5Q8TEV8 140 aa4.08□□□□□ -1.76
TRAV35-201ENST00000390462 YPEL2Q96QA6 119 aa4.08□□□□□ -1.76
TRAV35-201ENST00000390462 OSTCQ9NRP0 149 aa4.08□□□□□ -1.76
TRAV35-201ENST00000390462 CROCCQ5TZA2 2017 aa4.07□□□□□ -1.76
TRAV35-201ENST00000390462 IGHV3-73A0A0B4J1V6 119 aa4.07□□□□□ -1.76
TRAV35-201ENST00000390462 IGHV1-58A0A0C4DH39 117 aa4.07□□□□□ -1.76
TRAV35-201ENST00000390462 J3QR89 54 aa4.07□□□□□ -1.76
TRAV35-201ENST00000390462 TXNDC9O14530 226 aa4.07□□□□□ -1.76
TRAV35-201ENST00000390462 UBFD1O14562 309 aaKnown RBP4.07□□□□□ -1.76
TRAV35-201ENST00000390462 NAPSAO96009 420 aa4.07□□□□□ -1.76
TRAV35-201ENST00000390462 IGKV1-16P04430 117 aa4.07□□□□□ -1.76
TRAV35-201ENST00000390462 PAEPP09466 180 aa4.07□□□□□ -1.76
TRAV35-201ENST00000390462 FABP2P12104 132 aa4.07□□□□□ -1.76
TRAV35-201ENST00000390462 DYNLT3P51808 116 aa4.07□□□□□ -1.76
TRAV35-201ENST00000390462 KRTAP10-11P60412 298 aa4.07□□□□□ -1.76
TRAV35-201ENST00000390462 NDPQ00604 133 aa4.07□□□□□ -1.76
TRAV35-201ENST00000390462 KISS1Q15726 138 aa4.07□□□□□ -1.76
TRAV35-201ENST00000390462 MIAQ16674 131 aa4.07□□□□□ -1.76
TRAV35-201ENST00000390462 C4orf22Q6V702 233 aa4.07□□□□□ -1.76
TRAV35-201ENST00000390462 LINC00612Q8N6U2 182 aa4.07□□□□□ -1.76
TRAV35-201ENST00000390462 ST20-AS1Q8NBB2 130 aa4.07□□□□□ -1.76
TRAV35-201ENST00000390462 CBLN4Q9NTU7 201 aa4.07□□□□□ -1.76
TRAV35-201ENST00000390462 BAIAP2Q9UQB8 552 aa4.07□□□□□ -1.76
TRAV35-201ENST00000390462 HS3ST2Q9Y278 367 aa4.07□□□□□ -1.76
TRAV35-201ENST00000390462 KIF25-AS1Q9Y6Z4 181 aa4.07□□□□□ -1.76
TRAV35-201ENST00000390462 NIPBLQ6KC79 2804 aaeCLIP4.07□□□□□ -1.76
TRAV35-201ENST00000390462 ARHGAP21Q5T5U3 1957 aa4.06□□□□□ -1.76
TRAV35-201ENST00000390462 IGKV3D-20A0A0C4DH25 116 aa4.06□□□□□ -1.76
TRAV35-201ENST00000390462 C9orf170A2RU37 121 aa4.06□□□□□ -1.76
TRAV35-201ENST00000390462 SOD1P00441 154 aa4.06□□□□□ -1.76
TRAV35-201ENST00000390462 IL4P05112 153 aa4.06□□□□□ -1.76
TRAV35-201ENST00000390462 TSPAN19P0C672 248 aa4.06□□□□□ -1.76
TRAV35-201ENST00000390462 TMBIM6P55061 237 aa4.06□□□□□ -1.76
TRAV35-201ENST00000390462 ZNF141Q15928 474 aa4.06□□□□□ -1.76
TRAV35-201ENST00000390462 TMEM244Q5VVB8 128 aa4.06□□□□□ -1.76
TRAV35-201ENST00000390462 AMMECR1LQ6DCA0 310 aa4.06□□□□□ -1.76
TRAV35-201ENST00000390462 HAGHLQ6PII5 290 aaPredicted RBP4.06□□□□□ -1.76
TRAV35-201ENST00000390462 TMEM14EPQ6UXP3 125 aa4.06□□□□□ -1.76
TRAV35-201ENST00000390462 C2orf91Q6ZV80 131 aa4.06□□□□□ -1.76
TRAV35-201ENST00000390462 LINC00305Q7Z4B0 112 aa4.06□□□□□ -1.76
TRAV35-201ENST00000390462 APCDD1LQ8NCL9 501 aa4.06□□□□□ -1.76
TRAV35-201ENST00000390462 SCGB3A1Q96QR1 104 aa4.06□□□□□ -1.76
TRAV35-201ENST00000390462 PKMYT1Q99640 499 aa4.06□□□□□ -1.76
TRAV35-201ENST00000390462 HIST1H2BLQ99880 126 aa4.06□□□□□ -1.76
TRAV35-201ENST00000390462 ADAT1Q9BUB4 502 aaKnown RBP4.06□□□□□ -1.76
TRAV35-201ENST00000390462 GNG8Q9UK08 70 aa4.06□□□□□ -1.76
TRAV35-201ENST00000390462 PRRC2CQ9Y520 2896 aaKnown RBP4.06□□□□□ -1.76
TRAV35-201ENST00000390462 ZNF469Q96JG9 3925 aaPredicted RBP4.06□□□□□ -1.76
TRAV35-201ENST00000390462 UNC13CQ8NB66 2214 aa4.06□□□□□ -1.76
TRAV35-201ENST00000390462 DIDO1Q9BTC0 2240 aaKnown RBP4.06□□□□□ -1.76
TRAV35-201ENST00000390462 DOCK4Q8N1I0 1966 aa4.05□□□□□ -1.76
TRAV35-201ENST00000390462 NUP210LQ5VU65 1888 aa4.05□□□□□ -1.76
TRAV35-201ENST00000390462 HCRTO43612 131 aa4.05□□□□□ -1.76
TRAV35-201ENST00000390462 IGHV3-53P01767 116 aa4.05□□□□□ -1.76
TRAV35-201ENST00000390462 SMIM6P0DI80 62 aa4.05□□□□□ -1.76
TRAV35-201ENST00000390462 ZNF19P17023 458 aa4.05□□□□□ -1.76
TRAV35-201ENST00000390462 VEGFCP49767 419 aa4.05□□□□□ -1.76
TRAV35-201ENST00000390462 HBBP68871 147 aa4.05□□□□□ -1.76
TRAV35-201ENST00000390462 C22orf39Q6P5X5 142 aa4.05□□□□□ -1.76
TRAV35-201ENST00000390462 MIEN1Q9BRT3 115 aa4.05□□□□□ -1.76
TRAV35-201ENST00000390462 ZNF443Q9Y2A4 671 aaPredicted RBP4.05□□□□□ -1.76
TRAV35-201ENST00000390462 U3KQA8 63 aa4.05□□□□□ -1.76
TRAV35-201ENST00000390462 NUP214P35658 2090 aaPredicted RBP4.04□□□□□ -1.76
TRAV35-201ENST00000390462 MDFIC2A0A1B0GVS7 189 aa4.04□□□□□ -1.76
TRAV35-201ENST00000390462 MEIS3P1A6NDR6 274 aa4.04□□□□□ -1.76
TRAV35-201ENST00000390462 XCL1P47992 114 aa4.04□□□□□ -1.76
TRAV35-201ENST00000390462 RAB5CP51148 216 aa4.04□□□□□ -1.76
TRAV35-201ENST00000390462 FOXA1P55317 472 aa4.04□□□□□ -1.76
TRAV35-201ENST00000390462 FAM229BQ4G0N7 80 aa4.04□□□□□ -1.76
TRAV35-201ENST00000390462 TMEM69Q5SWH9 247 aa4.04□□□□□ -1.76
TRAV35-201ENST00000390462 PHF5AQ7RTV0 110 aaKnown RBP4.04□□□□□ -1.76
TRAV35-201ENST00000390462 OR4S1Q8NGB4 309 aa4.04□□□□□ -1.76
TRAV35-201ENST00000390462 BRK1Q8WUW1 75 aa4.04□□□□□ -1.76
TRAV35-201ENST00000390462 MRPL16Q9NX20 251 aaKnown RBP4.04□□□□□ -1.76
TRAV35-201ENST00000390462 TNFSF18Q9UNG2 199 aa4.04□□□□□ -1.76
TRAV35-201ENST00000390462 AGRNO00468 2067 aa4.04□□□□□ -1.76
TRAV35-201ENST00000390462 TACC2O95359 2948 aa4.04□□□□□ -1.76
TRAV35-201ENST00000390462 TRGV10A0A0A0MS01 117 aa4.03□□□□□ -1.76
TRAV35-201ENST00000390462 IGHV3-15A0A0B4J1V0 119 aa4.03□□□□□ -1.76
TRAV35-201ENST00000390462 A0A0J9YW62 118 aa4.03□□□□□ -1.76
TRAV35-201ENST00000390462 C16orf90A8MZG2 172 aa4.03□□□□□ -1.76
TRAV35-201ENST00000390462 WISP3O95389 354 aaPredicted RBP4.03□□□□□ -1.76
TRAV35-201ENST00000390462 RPL22P35268 128 aaKnown RBP4.03□□□□□ -1.76
TRAV35-201ENST00000390462 RPL35P42766 123 aaKnown RBP4.03□□□□□ -1.76
TRAV35-201ENST00000390462 COPZ1P61923 177 aa4.03□□□□□ -1.76
TRAV35-201ENST00000390462 TAF9Q16594 264 aa4.03□□□□□ -1.76
TRAV35-201ENST00000390462 NOXRED1Q6NXP6 359 aa4.03□□□□□ -1.76
TRAV35-201ENST00000390462 TEX29Q8N6K0 151 aa4.03□□□□□ -1.76
TRAV35-201ENST00000390462 SIGLECL1Q8N7X8 197 aa4.03□□□□□ -1.76
TRAV35-201ENST00000390462 KLF14Q8TD94 323 aaPredicted RBP4.03□□□□□ -1.76
TRAV35-201ENST00000390462 RTTNQ86VV8 2226 aa4.03□□□□□ -1.76
TRAV35-201ENST00000390462 DCHS2Q6V1P9 2916 aa4.03□□□□□ -1.76
TRAV35-201ENST00000390462 PKDREJQ9NTG1 2253 aa4.02□□□□□ -1.77
TRAV35-201ENST00000390462 TRPM6Q9BX84 2022 aa4.02□□□□□ -1.77
TRAV35-201ENST00000390462 TRAV13-1A0A0B4J241 112 aa4.02□□□□□ -1.77
TRAV35-201ENST00000390462 A0A1W2PQD3 144 aa4.02□□□□□ -1.77
TRAV35-201ENST00000390462 C17orf98A8MV24 154 aa4.02□□□□□ -1.77
TRAV35-201ENST00000390462 C10orf142B7Z368 130 aa4.02□□□□□ -1.77
TRAV35-201ENST00000390462 GPX1P07203 203 aa4.02□□□□□ -1.77
TRAV35-201ENST00000390462 IGLC6P0CF74 106 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms