RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 ZNF726P1Q15940 193 aa11.94□□□□□ -0.5
RER1-202ENST00000378512 IBA57Q5T440 356 aaKnown RBP11.94□□□□□ -0.5
RER1-202ENST00000378512 Q6AWC8 147 aa11.94□□□□□ -0.5
RER1-202ENST00000378512 C18orf15Q96N68 181 aa11.94□□□□□ -0.5
RER1-202ENST00000378512 ACTR3CQ9C0K3 210 aaPredicted RBP11.94□□□□□ -0.5
RER1-202ENST00000378512 SNURFLB1AK76 121 aa11.94□□□□□ -0.5
RER1-202ENST00000378512 SMLR1H3BR10 107 aa11.94□□□□□ -0.5
RER1-202ENST00000378512 CXorf1O96002 111 aa11.94□□□□□ -0.5
RER1-202ENST00000378512 KCNRGQ8N5I3 272 aa11.94□□□□□ -0.5
RER1-202ENST00000378512 POM121L12Q8N7R1 296 aa11.94□□□□□ -0.5
RER1-202ENST00000378512 C15orf53Q8NAA6 179 aa11.94□□□□□ -0.5
RER1-202ENST00000378512 OR11H4Q8NGC9 324 aa11.94□□□□□ -0.5
RER1-202ENST00000378512 HYLS1Q96M11 299 aa11.94□□□□□ -0.5
RER1-202ENST00000378512 TCL1AP56279 114 aa11.93□□□□□ -0.5
RER1-202ENST00000378512 CMTM2Q8TAZ6 248 aa11.93□□□□□ -0.5
RER1-202ENST00000378512 TMEM167BQ9NRX6 74 aa11.93□□□□□ -0.5
RER1-202ENST00000378512 IGHV1OR15-1A0A075B7D0 117 aa11.92□□□□□ -0.5
RER1-202ENST00000378512 CTXND1A0A1B0GTU2 59 aa11.92□□□□□ -0.5
RER1-202ENST00000378512 SERTM2A0A1B0GWG4 89 aa11.92□□□□□ -0.5
RER1-202ENST00000378512 GOLT1AQ6ZVE7 132 aa11.92□□□□□ -0.5
RER1-202ENST00000378512 C5orf17Q8NAS9 161 aa11.92□□□□□ -0.5
RER1-202ENST00000378512 TVP23CQ96ET8 276 aa11.92□□□□□ -0.5
RER1-202ENST00000378512 GSN-AS1Q9NRJ2 163 aa11.92□□□□□ -0.5
RER1-202ENST00000378512 PKHD1P08F94 4074 aa11.91□□□□□ -0.5
RER1-202ENST00000378512 GGTLC3B5MD39 225 aa11.91□□□□□ -0.5
RER1-202ENST00000378512 M0R2N4 97 aa11.91□□□□□ -0.5
RER1-202ENST00000378512 SPINK4O60575 86 aa11.91□□□□□ -0.5
RER1-202ENST00000378512 RNF212Q495C1 297 aa11.91□□□□□ -0.5
RER1-202ENST00000378512 TP53TG3Q9ULZ0 132 aa11.91□□□□□ -0.5
RER1-202ENST00000378512 PKD1P98161 4303 aa11.9□□□□□ -0.5
RER1-202ENST00000378512 MUC4Q99102 2169 aa11.9□□□□□ -0.5
RER1-202ENST00000378512 A0A1W2PRE2 83 aa11.9□□□□□ -0.5
RER1-202ENST00000378512 F5H768 121 aa11.9□□□□□ -0.5
RER1-202ENST00000378512 TCRAP04437 139 aa11.9□□□□□ -0.5
RER1-202ENST00000378512 GNG5P63218 68 aa11.9□□□□□ -0.5
RER1-202ENST00000378512 TDRG1Q3Y452 100 aa11.9□□□□□ -0.5
RER1-202ENST00000378512 Q6ZTI0 123 aa11.9□□□□□ -0.5
RER1-202ENST00000378512 ARPC5LQ9BPX5 153 aa11.9□□□□□ -0.5
RER1-202ENST00000378512 KLF12Q9Y4X4 402 aa11.9□□□□□ -0.5
RER1-202ENST00000378512 TRAV8-1A0A0A6YYK1 113 aa11.89□□□□□ -0.51
RER1-202ENST00000378512 GAGE12BA1L429 117 aa11.89□□□□□ -0.51
RER1-202ENST00000378512 RGS13O14921 159 aa11.89□□□□□ -0.51
RER1-202ENST00000378512 GAGE7O76087 117 aa11.89□□□□□ -0.51
RER1-202ENST00000378512 IGLV2-11P01706 119 aa11.89□□□□□ -0.51
RER1-202ENST00000378512 GAGE12FP0CL80 117 aa11.89□□□□□ -0.51
RER1-202ENST00000378512 GAGE12GP0CL81 117 aa11.89□□□□□ -0.51
RER1-202ENST00000378512 GAGE12IP0CL82 117 aa11.89□□□□□ -0.51
RER1-202ENST00000378512 LGALS9BQ3B8N2 356 aa11.89□□□□□ -0.51
RER1-202ENST00000378512 HOXA5P20719 270 aa11.88□□□□□ -0.51
RER1-202ENST00000378512 SUMO1P63165 101 aaKnown RBP11.88□□□□□ -0.51
RER1-202ENST00000378512 RPH3ALQ9UNE2 315 aa11.88□□□□□ -0.51
RER1-202ENST00000378512 DYNC1H1Q14204 4646 aaKnown RBP11.88□□□□□ -0.51
RER1-202ENST00000378512 A0A0D9SG52 128 aa11.87□□□□□ -0.51
RER1-202ENST00000378512 A0A1B0GVY2 172 aa11.87□□□□□ -0.51
RER1-202ENST00000378512 H3BNG1 76 aa11.87□□□□□ -0.51
RER1-202ENST00000378512 RTL8CO15255 209 aa11.87□□□□□ -0.51
RER1-202ENST00000378512 AKR1C8PQ5T2L2 129 aa11.87□□□□□ -0.51
RER1-202ENST00000378512 EPDR1Q9UM22 224 aa11.87□□□□□ -0.51
RER1-202ENST00000378512 PCLOQ9Y6V0 5065 aa11.87□□□□□ -0.51
RER1-202ENST00000378512 SEC11BP0C7V7 166 aa11.86□□□□□ -0.51
RER1-202ENST00000378512 TMPRSS5Q9H3S3 457 aa11.86□□□□□ -0.51
RER1-202ENST00000378512 TREM1Q9NP99 234 aa11.86□□□□□ -0.51
RER1-202ENST00000378512 IGLV2-18A0A075B6J9 118 aa11.86□□□□□ -0.51
RER1-202ENST00000378512 FBLL1A6NHQ2 334 aaKnown RBP11.86□□□□□ -0.51
RER1-202ENST00000378512 FAM3BP58499 235 aaPredicted RBP11.86□□□□□ -0.51
RER1-202ENST00000378512 CYB561D1Q8N8Q1 229 aa11.86□□□□□ -0.51
RER1-202ENST00000378512 TMEM75Q8N9X5 138 aa11.86□□□□□ -0.51
RER1-202ENST00000378512 ATG101Q9BSB4 218 aa11.86□□□□□ -0.51
RER1-202ENST00000378512 TRAV21A0A0B4J279 112 aa11.85□□□□□ -0.51
RER1-202ENST00000378512 BCL2L11O43521 198 aa11.85□□□□□ -0.51
RER1-202ENST00000378512 ZNF415Q09FC8 603 aa11.85□□□□□ -0.51
RER1-202ENST00000378512 MUC21Q5SSG8 566 aa11.85□□□□□ -0.51
RER1-202ENST00000378512 FAM159AQ6UWV7 190 aa11.85□□□□□ -0.51
RER1-202ENST00000378512 NKX6-2Q9C056 277 aaPredicted RBP11.85□□□□□ -0.51
RER1-202ENST00000378512 MDFICQ9P1T7 246 aa11.85□□□□□ -0.51
RER1-202ENST00000378512 PSG8Q9UQ74 426 aa11.85□□□□□ -0.51
RER1-202ENST00000378512 DNAH11Q96DT5 4516 aa11.84□□□□□ -0.51
RER1-202ENST00000378512 TRAV26-1A0A087WT03 109 aa11.84□□□□□ -0.51
RER1-202ENST00000378512 TRGV1A0A0A0MS02 117 aa11.84□□□□□ -0.51
RER1-202ENST00000378512 MAP1LC3B2A6NCE7 125 aa11.84□□□□□ -0.51
RER1-202ENST00000378512 FAM74A7A6NL05 159 aa11.84□□□□□ -0.51
RER1-202ENST00000378512 K7EQM0 130 aa11.84□□□□□ -0.51
RER1-202ENST00000378512 FGF8P55075 233 aaPredicted RBP11.84□□□□□ -0.51
RER1-202ENST00000378512 FLI1Q01543 452 aaPredicted RBP11.84□□□□□ -0.51
RER1-202ENST00000378512 Q6ZNX1 250 aa11.84□□□□□ -0.51
RER1-202ENST00000378512 Q6ZR54 194 aa11.84□□□□□ -0.51
RER1-202ENST00000378512 SGK494Q96LW2 274 aa11.84□□□□□ -0.51
RER1-202ENST00000378512 MAP1LC3BQ9GZQ8 125 aa11.84□□□□□ -0.51
RER1-202ENST00000378512 TRGV11A0A075B6L2 103 aa11.83□□□□□ -0.52
RER1-202ENST00000378512 UMAD1C9J7I0 102 aa11.83□□□□□ -0.52
RER1-202ENST00000378512 F6UZH7 168 aa11.83□□□□□ -0.52
RER1-202ENST00000378512 FHITP49789 147 aa11.83□□□□□ -0.52
RER1-202ENST00000378512 ZNF80P51504 273 aaPredicted RBP11.83□□□□□ -0.52
RER1-202ENST00000378512 OR5I1Q13606 314 aa11.83□□□□□ -0.52
RER1-202ENST00000378512 TCTE3Q8IZS6 198 aa11.83□□□□□ -0.52
RER1-202ENST00000378512 RASL10AQ92737 203 aa11.83□□□□□ -0.52
RER1-202ENST00000378512 SPXQ9BT56 116 aa11.83□□□□□ -0.52
RER1-202ENST00000378512 ARL2-SNX15V9GYD0 113 aa11.83□□□□□ -0.52
RER1-202ENST00000378512 TRGV2A0A075B6R0 118 aa11.82□□□□□ -0.52
RER1-202ENST00000378512 KANTRA0A1W2PQU2 76 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms