RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 NPFFO15130 113 aa19.44■□□□□ 0.7
C9orf40-201ENST00000376854 TMEM78Q5T7P6 136 aa19.44■□□□□ 0.7
C9orf40-201ENST00000376854 ZFHX3Q15911 3703 aa19.44■□□□□ 0.7
C9orf40-201ENST00000376854 C7orf71A4D174 169 aa19.43■□□□□ 0.7
C9orf40-201ENST00000376854 C8orf86Q6ZUL3 223 aa19.43■□□□□ 0.7
C9orf40-201ENST00000376854 ITLN2Q8WWU7 325 aaPredicted RBP19.43■□□□□ 0.7
C9orf40-201ENST00000376854 GATA1P15976 413 aaPredicted RBP19.43■□□□□ 0.7
C9orf40-201ENST00000376854 PEF1Q9UBV8 284 aaKnown RBP19.43■□□□□ 0.7
C9orf40-201ENST00000376854 FCER1GP30273 86 aa19.42■□□□□ 0.7
C9orf40-201ENST00000376854 C5orf56Q8N8D9 126 aa19.42■□□□□ 0.7
C9orf40-201ENST00000376854 RBX1P62877 108 aa19.42■□□□□ 0.7
C9orf40-201ENST00000376854 OR9G4Q8NGQ1 327 aa19.42■□□□□ 0.7
C9orf40-201ENST00000376854 TRAV8-6A0A0B4J262 113 aa19.41■□□□□ 0.7
C9orf40-201ENST00000376854 A1L4Q6 167 aa19.41■□□□□ 0.7
C9orf40-201ENST00000376854 MRPL53Q96EL3 112 aaKnown RBP19.41■□□□□ 0.7
C9orf40-201ENST00000376854 NMUP48645 174 aa19.41■□□□□ 0.7
C9orf40-201ENST00000376854 ATP5G2Q06055 141 aa19.41■□□□□ 0.7
C9orf40-201ENST00000376854 SPTAN1Q13813 2472 aaKnown RBP19.41■□□□□ 0.7
C9orf40-201ENST00000376854 PRORYQ9H606 182 aa19.4■□□□□ 0.7
C9orf40-201ENST00000376854 TRGV3P03979 118 aa19.4■□□□□ 0.7
C9orf40-201ENST00000376854 GNLYP22749 145 aa19.4■□□□□ 0.7
C9orf40-201ENST00000376854 TMEM219Q86XT9 240 aa19.4■□□□□ 0.7
C9orf40-201ENST00000376854 U3KQE9 123 aa19.4■□□□□ 0.7
C9orf40-201ENST00000376854 SIVA1O15304 175 aa19.39■□□□□ 0.69
C9orf40-201ENST00000376854 PCP2Q8IVA1 136 aa19.39■□□□□ 0.69
C9orf40-201ENST00000376854 HIF1ANQ9NWT6 349 aa19.39■□□□□ 0.69
C9orf40-201ENST00000376854 CELSR1Q9NYQ6 3014 aa19.38■□□□□ 0.69
C9orf40-201ENST00000376854 HSD52Q0P140 79 aa19.38■□□□□ 0.69
C9orf40-201ENST00000376854 C9orf47Q6ZRZ4 202 aa19.38■□□□□ 0.69
C9orf40-201ENST00000376854 COL12A1Q99715 3063 aa19.38■□□□□ 0.69
C9orf40-201ENST00000376854 IGHV7-4-1A0A0J9YVY3 117 aa19.37■□□□□ 0.69
C9orf40-201ENST00000376854 A6NDN8 102 aa19.37■□□□□ 0.69
C9orf40-201ENST00000376854 SMIM15Q7Z3B0 74 aa19.37■□□□□ 0.69
C9orf40-201ENST00000376854 Q8N8P6 123 aa19.37■□□□□ 0.69
C9orf40-201ENST00000376854 OR2K2Q8NGT1 345 aa19.37■□□□□ 0.69
C9orf40-201ENST00000376854 ODF1Q14990 250 aa19.36■□□□□ 0.69
C9orf40-201ENST00000376854 ADAMTSL5Q6ZMM2 481 aa19.36■□□□□ 0.69
C9orf40-201ENST00000376854 OR4X2Q8NGF9 303 aa19.36■□□□□ 0.69
C9orf40-201ENST00000376854 TMEM158Q8WZ71 300 aa19.36■□□□□ 0.69
C9orf40-201ENST00000376854 TRAV41A0A0B4J266 112 aa19.36■□□□□ 0.69
C9orf40-201ENST00000376854 PRSS1P07477 247 aa19.36■□□□□ 0.69
C9orf40-201ENST00000376854 Q6ZQT7 251 aa19.36■□□□□ 0.69
C9orf40-201ENST00000376854 C16orf92Q96LL3 132 aa19.36■□□□□ 0.69
C9orf40-201ENST00000376854 LINC00527Q9UJ94 153 aa19.36■□□□□ 0.69
C9orf40-201ENST00000376854 PKD1L2Q7Z442 2459 aa19.36■□□□□ 0.69
C9orf40-201ENST00000376854 IGLV2-18A0A075B6J9 118 aa19.35■□□□□ 0.69
C9orf40-201ENST00000376854 MOB4Q9Y3A3 225 aa19.35■□□□□ 0.69
C9orf40-201ENST00000376854 UFC1Q9Y3C8 167 aa19.35■□□□□ 0.69
C9orf40-201ENST00000376854 CFAP46Q8IYW2 2715 aa19.34■□□□□ 0.69
C9orf40-201ENST00000376854 IGHV3OR16-10A0A075B7F0 116 aa19.34■□□□□ 0.69
C9orf40-201ENST00000376854 ZMAT4Q9H898 229 aa19.34■□□□□ 0.69
C9orf40-201ENST00000376854 H3BRM9 83 aa19.34■□□□□ 0.69
C9orf40-201ENST00000376854 PIFOQ8TCI5 191 aa19.34■□□□□ 0.69
C9orf40-201ENST00000376854 TRAV26-2A0A0B4J265 109 aa19.33■□□□□ 0.68
C9orf40-201ENST00000376854 FAM223BA6NKX1 122 aa19.33■□□□□ 0.68
C9orf40-201ENST00000376854 PCP4P48539 62 aa19.33■□□□□ 0.68
C9orf40-201ENST00000376854 SPANXN1Q5VSR9 72 aa19.33■□□□□ 0.68
C9orf40-201ENST00000376854 FAM223AQ8IWN6 122 aa19.33■□□□□ 0.68
C9orf40-201ENST00000376854 CST9LQ9H4G1 147 aa19.33■□□□□ 0.68
C9orf40-201ENST00000376854 HHLA3Q9XRX5 114 aa19.33■□□□□ 0.68
C9orf40-201ENST00000376854 CDKN1BP46527 198 aa19.32■□□□□ 0.68
C9orf40-201ENST00000376854 NRACQ8N912 160 aa19.32■□□□□ 0.68
C9orf40-201ENST00000376854 FOXC2Q99958 501 aa19.32■□□□□ 0.68
C9orf40-201ENST00000376854 KIR3DS1Q14943 382 aa19.31■□□□□ 0.68
C9orf40-201ENST00000376854 C19orf54Q5BKX5 351 aa19.31■□□□□ 0.68
C9orf40-201ENST00000376854 GLMPQ8WWB7 406 aa19.31■□□□□ 0.68
C9orf40-201ENST00000376854 AP1S3Q96PC3 154 aa19.31■□□□□ 0.68
C9orf40-201ENST00000376854 ATP6V0BQ99437 205 aa19.31■□□□□ 0.68
C9orf40-201ENST00000376854 ABCA2Q9BZC7 2435 aa19.31■□□□□ 0.68
C9orf40-201ENST00000376854 C9orf118A6NHY6 69 aa19.31■□□□□ 0.68
C9orf40-201ENST00000376854 ARL3P36405 182 aa19.31■□□□□ 0.68
C9orf40-201ENST00000376854 PSMG4Q5JS54 123 aa19.31■□□□□ 0.68
C9orf40-201ENST00000376854 MAP1AP78559 2803 aaPredicted RBP19.31■□□□□ 0.68
C9orf40-201ENST00000376854 IGHV4-4A0A075B6R2 117 aa19.3■□□□□ 0.68
C9orf40-201ENST00000376854 IGKCP01834 107 aa19.3■□□□□ 0.68
C9orf40-201ENST00000376854 SMIM17P0DL12 118 aa19.3■□□□□ 0.68
C9orf40-201ENST00000376854 C9orf139Q6ZV77 190 aa19.3■□□□□ 0.68
C9orf40-201ENST00000376854 C20orf173Q96LM9 149 aa19.3■□□□□ 0.68
C9orf40-201ENST00000376854 IGKV2D-26A0A0A0MRZ7 120 aa19.3■□□□□ 0.68
C9orf40-201ENST00000376854 ATP5LO75964 103 aa19.3■□□□□ 0.68
C9orf40-201ENST00000376854 IGHV4-39P01824 125 aa19.3■□□□□ 0.68
C9orf40-201ENST00000376854 PRR9Q5T870 116 aa19.3■□□□□ 0.68
C9orf40-201ENST00000376854 GAGE10A6NGK3 116 aa19.29■□□□□ 0.68
C9orf40-201ENST00000376854 C21orf62-AS1Q17RA5 79 aa19.29■□□□□ 0.68
C9orf40-201ENST00000376854 GAGE12BA1L429 117 aa19.29■□□□□ 0.68
C9orf40-201ENST00000376854 PRSS47A8MTI9 375 aa19.29■□□□□ 0.68
C9orf40-201ENST00000376854 H3BVH4 76 aa19.29■□□□□ 0.68
C9orf40-201ENST00000376854 LAGE3Q14657 143 aa19.28■□□□□ 0.68
C9orf40-201ENST00000376854 RNF151Q2KHN1 245 aa19.28■□□□□ 0.68
C9orf40-201ENST00000376854 SMPXQ9UHP9 88 aa19.28■□□□□ 0.68
C9orf40-201ENST00000376854 H3BUT2 72 aa19.27■□□□□ 0.68
C9orf40-201ENST00000376854 DPM2O94777 84 aa19.27■□□□□ 0.68
C9orf40-201ENST00000376854 IGF1P05019 195 aa19.27■□□□□ 0.68
C9orf40-201ENST00000376854 CRIP2P52943 208 aaPredicted RBP19.27■□□□□ 0.68
C9orf40-201ENST00000376854 OCIAD2Q56VL3 154 aa19.27■□□□□ 0.68
C9orf40-201ENST00000376854 UNQ9165/PRO28630Q6UXU0 137 aa19.27■□□□□ 0.68
C9orf40-201ENST00000376854 BRD3OSQ6XYD6 125 aa19.27■□□□□ 0.68
C9orf40-201ENST00000376854 JMJD8Q96S16 334 aa19.27■□□□□ 0.68
C9orf40-201ENST00000376854 LENEPQ9Y5L5 61 aa19.27■□□□□ 0.68
C9orf40-201ENST00000376854 IGHV1-69DA0A0B4J2H0 117 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms