RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 ZNF575Q86XF7 245 aa15.43■□□□□ 0.06
VSX1-202ENST00000376709 PRSS3P2Q8NHM4 247 aa15.43■□□□□ 0.06
VSX1-202ENST00000376709 AP5S1Q9NUS5 200 aa15.43■□□□□ 0.06
VSX1-202ENST00000376709 NBPF19A0A087WUL8 3843 aa15.43■□□□□ 0.06
VSX1-202ENST00000376709 RPL11P62913 178 aaKnown RBP15.43■□□□□ 0.06
VSX1-202ENST00000376709 CFHR3Q02985 330 aa15.43■□□□□ 0.06
VSX1-202ENST00000376709 HIST1H1AQ02539 215 aaPredicted RBP15.42■□□□□ 0.06
VSX1-202ENST00000376709 LOXL1Q08397 574 aaPredicted RBP15.42■□□□□ 0.06
VSX1-202ENST00000376709 ORMDL3Q8N138 153 aa15.42■□□□□ 0.06
VSX1-202ENST00000376709 BEX4Q9NWD9 120 aaPredicted RBP15.42■□□□□ 0.06
VSX1-202ENST00000376709 OR5AL1P0C617 328 aa15.42■□□□□ 0.06
VSX1-202ENST00000376709 Q5PR19 223 aa15.42■□□□□ 0.06
VSX1-202ENST00000376709 CYB5R2Q6BCY4 276 aa15.42■□□□□ 0.06
VSX1-202ENST00000376709 FA2HQ7L5A8 372 aa15.42■□□□□ 0.06
VSX1-202ENST00000376709 C20orf173Q96LM9 149 aa15.41■□□□□ 0.06
VSX1-202ENST00000376709 PRELID3AQ96N28 172 aa15.41■□□□□ 0.06
VSX1-202ENST00000376709 TIMM8BQ9Y5J9 83 aaPredicted RBP15.41■□□□□ 0.06
VSX1-202ENST00000376709 IGHV4-31P0DP07 118 aa15.41■□□□□ 0.06
VSX1-202ENST00000376709 NUTF2P61970 127 aaKnown RBP15.41■□□□□ 0.06
VSX1-202ENST00000376709 MRPL51Q4U2R6 128 aaKnown RBP15.41■□□□□ 0.06
VSX1-202ENST00000376709 GPHB5Q86YW7 130 aa15.41■□□□□ 0.06
VSX1-202ENST00000376709 IGLC3P0DOY3 106 aa15.4■□□□□ 0.06
VSX1-202ENST00000376709 DAZ1Q9NQZ3 744 aaKnown RBP15.4■□□□□ 0.06
VSX1-202ENST00000376709 U3KQK5 164 aa15.4■□□□□ 0.06
VSX1-202ENST00000376709 IGKV3D-20A0A0C4DH25 116 aa15.39■□□□□ 0.05
VSX1-202ENST00000376709 LOC389332A0A1B0GUA5 103 aa15.39■□□□□ 0.05
VSX1-202ENST00000376709 TM4SF20Q53R12 229 aa15.39■□□□□ 0.05
VSX1-202ENST00000376709 CNFNQ9BYD5 112 aa15.39■□□□□ 0.05
VSX1-202ENST00000376709 MSRB1Q9NZV6 116 aa15.39■□□□□ 0.05
VSX1-202ENST00000376709 PEF1Q9UBV8 284 aaKnown RBP15.39■□□□□ 0.05
VSX1-202ENST00000376709 ZNF580Q9UK33 172 aa15.39■□□□□ 0.05
VSX1-202ENST00000376709 SYS1-DBNDD2H3BUS1 97 aa15.39■□□□□ 0.05
VSX1-202ENST00000376709 CRXO43186 299 aaPredicted RBP15.39■□□□□ 0.05
VSX1-202ENST00000376709 CKS2P33552 79 aa15.39■□□□□ 0.05
VSX1-202ENST00000376709 IFI27P40305 119 aaPredicted RBP15.39■□□□□ 0.05
VSX1-202ENST00000376709 RHPN1-AS1Q9BWJ2 59 aa15.39■□□□□ 0.05
VSX1-202ENST00000376709 TMEM191AQ9H0A3 160 aa15.39■□□□□ 0.05
VSX1-202ENST00000376709 PPP1R14DQ9NXH3 145 aa15.39■□□□□ 0.05
VSX1-202ENST00000376709 HSPB8Q9UJY1 196 aa15.39■□□□□ 0.05
VSX1-202ENST00000376709 MXRA5Q9NR99 2828 aa15.39■□□□□ 0.05
VSX1-202ENST00000376709 IGKV3-7A0A075B6H7 116 aa15.38■□□□□ 0.05
VSX1-202ENST00000376709 IGHV7-4-1A0A0J9YVY3 117 aa15.38■□□□□ 0.05
VSX1-202ENST00000376709 KLHDC1Q8N7A1 406 aa15.38■□□□□ 0.05
VSX1-202ENST00000376709 OR10J6PQ8NGY7 276 aa15.38■□□□□ 0.05
VSX1-202ENST00000376709 PSMG3-AS1Q96PY0 264 aa15.38■□□□□ 0.05
VSX1-202ENST00000376709 MAP1LC3CQ9BXW4 147 aa15.38■□□□□ 0.05
VSX1-202ENST00000376709 C11orf21Q9P2W6 132 aa15.38■□□□□ 0.05
VSX1-202ENST00000376709 UQCR10Q9UDW1 63 aa15.38■□□□□ 0.05
VSX1-202ENST00000376709 KMT2BQ9UMN6 2715 aaPredicted RBP15.38■□□□□ 0.05
VSX1-202ENST00000376709 CR1P17927 2039 aa15.38■□□□□ 0.05
VSX1-202ENST00000376709 PSMB8P28062 276 aa15.38■□□□□ 0.05
VSX1-202ENST00000376709 FOXE3Q13461 319 aa15.38■□□□□ 0.05
VSX1-202ENST00000376709 MRPL52Q86TS9 123 aaKnown RBP15.38■□□□□ 0.05
VSX1-202ENST00000376709 C20orf202A1L168 122 aa15.37■□□□□ 0.05
VSX1-202ENST00000376709 SOCS3O14543 225 aa15.37■□□□□ 0.05
VSX1-202ENST00000376709 SIGLEC8Q9NYZ4 499 aa15.37■□□□□ 0.05
VSX1-202ENST00000376709 TRAV9-2A0A087WT02 112 aa15.36■□□□□ 0.05
VSX1-202ENST00000376709 FAM106AQ4KMX7 169 aa15.36■□□□□ 0.05
VSX1-202ENST00000376709 LRRC75A-AS1Q8N1F1 130 aa15.36■□□□□ 0.05
VSX1-202ENST00000376709 Q96MF0 132 aa15.36■□□□□ 0.05
VSX1-202ENST00000376709 LENEPQ9Y5L5 61 aa15.36■□□□□ 0.05
VSX1-202ENST00000376709 SMKR1H3BMG3 65 aa15.36■□□□□ 0.05
VSX1-202ENST00000376709 OVOL1O14753 267 aa15.36■□□□□ 0.05
VSX1-202ENST00000376709 BATFQ16520 125 aa15.36■□□□□ 0.05
VSX1-202ENST00000376709 OR10AG1Q8NH19 301 aa15.36■□□□□ 0.05
VSX1-202ENST00000376709 TEX15Q9BXT5 2789 aa15.36■□□□□ 0.05
VSX1-202ENST00000376709 OR4C46A6NHA9 309 aa15.35■□□□□ 0.05
VSX1-202ENST00000376709 HIST2H2BCQ6DN03 193 aa15.35■□□□□ 0.05
VSX1-202ENST00000376709 Q6ZN92 141 aa15.35■□□□□ 0.05
VSX1-202ENST00000376709 LINC00477Q96M19 166 aa15.35■□□□□ 0.05
VSX1-202ENST00000376709 H0Y8G0 127 aa15.35■□□□□ 0.05
VSX1-202ENST00000376709 J3KRW8 73 aa15.35■□□□□ 0.05
VSX1-202ENST00000376709 NCR2O95944 276 aa15.35■□□□□ 0.05
VSX1-202ENST00000376709 IGLL1P15814 213 aa15.35■□□□□ 0.05
VSX1-202ENST00000376709 C10orf99Q6UWK7 81 aa15.35■□□□□ 0.05
VSX1-202ENST00000376709 VPREB3Q9UKI3 123 aa15.35■□□□□ 0.05
VSX1-202ENST00000376709 SELENOKQ9Y6D0 94 aa15.35■□□□□ 0.05
VSX1-202ENST00000376709 CREBBPQ92793 2442 aa15.35■□□□□ 0.05
VSX1-202ENST00000376709 Q6ZQT7 251 aa15.34■□□□□ 0.05
VSX1-202ENST00000376709 NPYP01303 97 aa15.34■□□□□ 0.05
VSX1-202ENST00000376709 PRR9Q5T870 116 aa15.34■□□□□ 0.05
VSX1-202ENST00000376709 PRSS57Q6UWY2 283 aa15.34■□□□□ 0.05
VSX1-202ENST00000376709 SMPXQ9UHP9 88 aa15.34■□□□□ 0.05
VSX1-202ENST00000376709 FSHBP01225 129 aa15.33■□□□□ 0.04
VSX1-202ENST00000376709 HNRNPA3P51991 378 aaKnown RBP15.33■□□□□ 0.04
VSX1-202ENST00000376709 DEFB1P60022 68 aa15.33■□□□□ 0.04
VSX1-202ENST00000376709 KRTAP1-3Q8IUG1 177 aa15.33■□□□□ 0.04
VSX1-202ENST00000376709 RNF185Q96GF1 192 aa15.33■□□□□ 0.04
VSX1-202ENST00000376709 DOPEY2Q9Y3R5 2298 aa15.33■□□□□ 0.04
VSX1-202ENST00000376709 PET117Q6UWS5 81 aa15.32■□□□□ 0.04
VSX1-202ENST00000376709 MCRIP2Q9BUT9 160 aaKnown RBP15.32■□□□□ 0.04
VSX1-202ENST00000376709 K7EMT4 169 aa15.32■□□□□ 0.04
VSX1-202ENST00000376709 PPBPP02775 128 aa15.32■□□□□ 0.04
VSX1-202ENST00000376709 SRD5A1P18405 259 aa15.32■□□□□ 0.04
VSX1-202ENST00000376709 ZNF469Q96JG9 3925 aaPredicted RBP15.31■□□□□ 0.04
VSX1-202ENST00000376709 TCAPO15273 167 aa15.31■□□□□ 0.04
VSX1-202ENST00000376709 RPLP1P05386 114 aaKnown RBP15.31■□□□□ 0.04
VSX1-202ENST00000376709 EDN2P20800 178 aa15.31■□□□□ 0.04
VSX1-202ENST00000376709 TMEM89A2RUT3 159 aa15.31■□□□□ 0.04
VSX1-202ENST00000376709 TCF21O43680 179 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms