RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 ABCA4P78363 2273 aa8.19□□□□□ -1.1
ABCF1-202ENST00000376545 CEP295Q9C0D2 2601 aa8.19□□□□□ -1.1
ABCF1-202ENST00000376545 IGHV3-35A0A0C4DH35 117 aa8.19□□□□□ -1.1
ABCF1-202ENST00000376545 TNFRSF6BO95407 300 aa8.19□□□□□ -1.1
ABCF1-202ENST00000376545 FXYD7P58549 80 aa8.19□□□□□ -1.1
ABCF1-202ENST00000376545 ECSCRQ19T08 205 aa8.19□□□□□ -1.1
ABCF1-202ENST00000376545 PSMG4Q5JS54 123 aa8.19□□□□□ -1.1
ABCF1-202ENST00000376545 EEF1AKMT3Q96AZ1 226 aa8.19□□□□□ -1.1
ABCF1-202ENST00000376545 COL25A1Q9BXS0 654 aaPredicted RBP8.19□□□□□ -1.1
ABCF1-202ENST00000376545 SVEP1Q4LDE5 3571 aa8.19□□□□□ -1.1
ABCF1-202ENST00000376545 ZFHX3Q15911 3703 aa8.19□□□□□ -1.1
ABCF1-202ENST00000376545 G3V318 75 aa8.18□□□□□ -1.1
ABCF1-202ENST00000376545 AMMECR1LQ6DCA0 310 aa8.18□□□□□ -1.1
ABCF1-202ENST00000376545 CLEC19AQ6UXS0 136 aa8.18□□□□□ -1.1
ABCF1-202ENST00000376545 PEF1Q9UBV8 284 aaKnown RBP8.18□□□□□ -1.1
ABCF1-202ENST00000376545 HHLA3Q9XRX5 114 aa8.18□□□□□ -1.1
ABCF1-202ENST00000376545 TRAV8-6A0A0B4J262 113 aa8.18□□□□□ -1.1
ABCF1-202ENST00000376545 GAGE12BA1L429 117 aa8.18□□□□□ -1.1
ABCF1-202ENST00000376545 SNAI2O43623 268 aa8.18□□□□□ -1.1
ABCF1-202ENST00000376545 SAMD13Q5VXD3 122 aa8.18□□□□□ -1.1
ABCF1-202ENST00000376545 NPFFO15130 113 aa8.17□□□□□ -1.1
ABCF1-202ENST00000376545 SCGB2A2Q13296 93 aa8.17□□□□□ -1.1
ABCF1-202ENST00000376545 ODF1Q14990 250 aa8.17□□□□□ -1.1
ABCF1-202ENST00000376545 C8orf86Q6ZUL3 223 aa8.17□□□□□ -1.1
ABCF1-202ENST00000376545 Q8N8P6 123 aa8.17□□□□□ -1.1
ABCF1-202ENST00000376545 DKK2Q9UBU2 259 aa8.17□□□□□ -1.1
ABCF1-202ENST00000376545 H3BRM9 83 aa8.17□□□□□ -1.1
ABCF1-202ENST00000376545 KIR3DS1Q14943 382 aa8.17□□□□□ -1.1
ABCF1-202ENST00000376545 OR4X2Q8NGF9 303 aa8.17□□□□□ -1.1
ABCF1-202ENST00000376545 ITLN2Q8WWU7 325 aaPredicted RBP8.17□□□□□ -1.1
ABCF1-202ENST00000376545 METTL26Q96S19 204 aa8.17□□□□□ -1.1
ABCF1-202ENST00000376545 C7orf71A4D174 169 aa8.16□□□□□ -1.1
ABCF1-202ENST00000376545 LEPP41159 167 aa8.16□□□□□ -1.1
ABCF1-202ENST00000376545 HSD52Q0P140 79 aa8.16□□□□□ -1.1
ABCF1-202ENST00000376545 NRACQ8N912 160 aa8.16□□□□□ -1.1
ABCF1-202ENST00000376545 LENEPQ9Y5L5 61 aa8.16□□□□□ -1.1
ABCF1-202ENST00000376545 BRI3O95415 125 aa8.16□□□□□ -1.1
ABCF1-202ENST00000376545 SMAGPQ0VAQ4 97 aa8.16□□□□□ -1.1
ABCF1-202ENST00000376545 ASH1LQ9NR48 2969 aaKnown RBP8.16□□□□□ -1.1
ABCF1-202ENST00000376545 A1L4Q6 167 aa8.16□□□□□ -1.1
ABCF1-202ENST00000376545 A6NJY4 79 aa8.16□□□□□ -1.1
ABCF1-202ENST00000376545 FAM223BA6NKX1 122 aa8.16□□□□□ -1.1
ABCF1-202ENST00000376545 FAM223AQ8IWN6 122 aa8.16□□□□□ -1.1
ABCF1-202ENST00000376545 GLMPQ8WWB7 406 aa8.16□□□□□ -1.1
ABCF1-202ENST00000376545 IGHV3-66A0A0C4DH42 116 aa8.15□□□□□ -1.1
ABCF1-202ENST00000376545 TRGV3P03979 118 aa8.15□□□□□ -1.1
ABCF1-202ENST00000376545 HLA-DRB4P13762 266 aa8.15□□□□□ -1.1
ABCF1-202ENST00000376545 EVI2AP22794 236 aa8.15□□□□□ -1.1
ABCF1-202ENST00000376545 TMEM78Q5T7P6 136 aa8.15□□□□□ -1.1
ABCF1-202ENST00000376545 UFSP1Q6NVU6 142 aa8.15□□□□□ -1.1
ABCF1-202ENST00000376545 BPESC1Q9GZL8 116 aa8.15□□□□□ -1.1
ABCF1-202ENST00000376545 HLA-DRB4X5D2U9 266 aa8.15□□□□□ -1.1
ABCF1-202ENST00000376545 C9orf118A6NHY6 69 aa8.15□□□□□ -1.11
ABCF1-202ENST00000376545 GATA1P15976 413 aaPredicted RBP8.15□□□□□ -1.11
ABCF1-202ENST00000376545 ATP5G2Q06055 141 aa8.15□□□□□ -1.11
ABCF1-202ENST00000376545 PCP2Q8IVA1 136 aa8.15□□□□□ -1.11
ABCF1-202ENST00000376545 OR2K2Q8NGT1 345 aa8.15□□□□□ -1.11
ABCF1-202ENST00000376545 GTSF1LQ9H1H1 148 aa8.15□□□□□ -1.11
ABCF1-202ENST00000376545 HIGD1BQ9P298 99 aa8.15□□□□□ -1.11
ABCF1-202ENST00000376545 SMPXQ9UHP9 88 aa8.15□□□□□ -1.11
ABCF1-202ENST00000376545 PPIFP30405 207 aaKnown RBP8.14□□□□□ -1.11
ABCF1-202ENST00000376545 UBTD1Q9HAC8 227 aa8.14□□□□□ -1.11
ABCF1-202ENST00000376545 MOB4Q9Y3A3 225 aa8.14□□□□□ -1.11
ABCF1-202ENST00000376545 TRAV26-1A0A087WT03 109 aa8.14□□□□□ -1.11
ABCF1-202ENST00000376545 A6NDN8 102 aa8.14□□□□□ -1.11
ABCF1-202ENST00000376545 SOCS3O14543 225 aa8.14□□□□□ -1.11
ABCF1-202ENST00000376545 GPHB5Q86YW7 130 aa8.14□□□□□ -1.11
ABCF1-202ENST00000376545 TMEM158Q8WZ71 300 aa8.14□□□□□ -1.11
ABCF1-202ENST00000376545 TRAV41A0A0B4J266 112 aa8.13□□□□□ -1.11
ABCF1-202ENST00000376545 ATP5LO75964 103 aa8.13□□□□□ -1.11
ABCF1-202ENST00000376545 C9orf139Q6ZV77 190 aa8.13□□□□□ -1.11
ABCF1-202ENST00000376545 IGF1P05019 195 aa8.13□□□□□ -1.11
ABCF1-202ENST00000376545 TMEM95Q3KNT9 176 aa8.13□□□□□ -1.11
ABCF1-202ENST00000376545 PRR9Q5T870 116 aa8.13□□□□□ -1.11
ABCF1-202ENST00000376545 Q6ZQT7 251 aa8.13□□□□□ -1.11
ABCF1-202ENST00000376545 WFDC3Q8IUB2 231 aa8.13□□□□□ -1.11
ABCF1-202ENST00000376545 C20orf173Q96LM9 149 aa8.13□□□□□ -1.11
ABCF1-202ENST00000376545 FAM19A4Q96LR4 140 aa8.13□□□□□ -1.11
ABCF1-202ENST00000376545 C18orf15Q96N68 181 aa8.13□□□□□ -1.11
ABCF1-202ENST00000376545 IGHV3OR16-13A0A075B7E8 117 aa8.12□□□□□ -1.11
ABCF1-202ENST00000376545 IGKV2D-26A0A0A0MRZ7 120 aa8.12□□□□□ -1.11
ABCF1-202ENST00000376545 IGHV3-74A0A0B4J1X5 117 aa8.12□□□□□ -1.11
ABCF1-202ENST00000376545 CRYBA4P53673 196 aa8.12□□□□□ -1.11
ABCF1-202ENST00000376545 A0A1B0GV72 72 aa8.12□□□□□ -1.11
ABCF1-202ENST00000376545 IGKCP01834 107 aa8.12□□□□□ -1.11
ABCF1-202ENST00000376545 APRG1Q8IVJ8 170 aa8.12□□□□□ -1.11
ABCF1-202ENST00000376545 MRAP2Q96G30 205 aa8.12□□□□□ -1.11
ABCF1-202ENST00000376545 ZNF207O43670 478 aaKnown RBP8.12□□□□□ -1.11
ABCF1-202ENST00000376545 SMIM17P0DL12 118 aa8.12□□□□□ -1.11
ABCF1-202ENST00000376545 LAGE3Q14657 143 aa8.12□□□□□ -1.11
ABCF1-202ENST00000376545 LINC00477Q96M19 166 aa8.12□□□□□ -1.11
ABCF1-202ENST00000376545 JMJD8Q96S16 334 aa8.12□□□□□ -1.11
ABCF1-202ENST00000376545 IGHV3-49A0A0A0MS15 119 aa8.11□□□□□ -1.11
ABCF1-202ENST00000376545 NDUFA4O00483 81 aa8.11□□□□□ -1.11
ABCF1-202ENST00000376545 NMUP48645 174 aa8.11□□□□□ -1.11
ABCF1-202ENST00000376545 ZFAND2AQ8N6M9 145 aa8.11□□□□□ -1.11
ABCF1-202ENST00000376545 IGHV1-69DA0A0B4J2H0 117 aa8.11□□□□□ -1.11
ABCF1-202ENST00000376545 IGHV1-69P01742 117 aa8.11□□□□□ -1.11
ABCF1-202ENST00000376545 C16orf92Q96LL3 132 aa8.11□□□□□ -1.11
ABCF1-202ENST00000376545 VPS13CQ709C8 3753 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms