RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 CTRLP40313 264 aa8.13□□□□□ -1.11
PTCH1-204ENST00000375290 ATP5EP56381 51 aaPredicted RBP8.13□□□□□ -1.11
PTCH1-204ENST00000375290 NPC2P61916 151 aa8.12□□□□□ -1.11
PTCH1-204ENST00000375290 ZNF407Q9C0G0 2248 aa8.12□□□□□ -1.11
PTCH1-204ENST00000375290 ORMDL1Q9P0S3 153 aa8.12□□□□□ -1.11
PTCH1-204ENST00000375290 TCF15Q12870 199 aa8.12□□□□□ -1.11
PTCH1-204ENST00000375290 COL4A6Q14031 1691 aa8.12□□□□□ -1.11
PTCH1-204ENST00000375290 WT1-ASQ06250 92 aa8.12□□□□□ -1.11
PTCH1-204ENST00000375290 IGHV3OR16-13A0A075B7E8 117 aa8.12□□□□□ -1.11
PTCH1-204ENST00000375290 IGHV3-74A0A0B4J1X5 117 aa8.12□□□□□ -1.11
PTCH1-204ENST00000375290 SPAARA0A1B0GVQ0 90 aa8.12□□□□□ -1.11
PTCH1-204ENST00000375290 LY6EQ16553 131 aa8.12□□□□□ -1.11
PTCH1-204ENST00000375290 IGHV1OR15-1A0A075B7D0 117 aa8.12□□□□□ -1.11
PTCH1-204ENST00000375290 A0A0B4J2C4 111 aa8.12□□□□□ -1.11
PTCH1-204ENST00000375290 IGHV3-35A0A0C4DH35 117 aa8.12□□□□□ -1.11
PTCH1-204ENST00000375290 IGHV1-69P01742 117 aa8.12□□□□□ -1.11
PTCH1-204ENST00000375290 hADV29S1A0JD25 119 aa8.12□□□□□ -1.11
PTCH1-204ENST00000375290 C11orf86A6NJI1 115 aa8.11□□□□□ -1.11
PTCH1-204ENST00000375290 HOXD3P31249 432 aaPredicted RBP8.11□□□□□ -1.11
PTCH1-204ENST00000375290 E9PLD3 99 aa8.11□□□□□ -1.11
PTCH1-204ENST00000375290 C8orf86Q6ZUL3 223 aa8.11□□□□□ -1.11
PTCH1-204ENST00000375290 IGHV3-66A0A0C4DH42 116 aa8.11□□□□□ -1.11
PTCH1-204ENST00000375290 C17orf58Q2M2W7 97 aa8.11□□□□□ -1.11
PTCH1-204ENST00000375290 LINC00479Q96M42 142 aa8.11□□□□□ -1.11
PTCH1-204ENST00000375290 NOTCH3Q9UM47 2321 aa8.11□□□□□ -1.11
PTCH1-204ENST00000375290 NAA38Q9BRA0 125 aaKnown RBP8.11□□□□□ -1.11
PTCH1-204ENST00000375290 WIPF3A6NGB9 483 aa8.11□□□□□ -1.11
PTCH1-204ENST00000375290 IGHV3-23P01764 117 aa8.11□□□□□ -1.11
PTCH1-204ENST00000375290 FAM201AQ5SY85 155 aa8.11□□□□□ -1.11
PTCH1-204ENST00000375290 KIAA1671Q9BY89 1806 aa8.11□□□□□ -1.11
PTCH1-204ENST00000375290 CEACAM8P31997 349 aaPredicted RBP8.1□□□□□ -1.11
PTCH1-204ENST00000375290 CXCL5P42830 114 aa8.1□□□□□ -1.11
PTCH1-204ENST00000375290 Q8TAT8 98 aa8.1□□□□□ -1.11
PTCH1-204ENST00000375290 C11orf1Q9H5F2 150 aa8.1□□□□□ -1.11
PTCH1-204ENST00000375290 ADAMTS9Q9P2N4 1935 aa8.1□□□□□ -1.11
PTCH1-204ENST00000375290 IGKV3OR2-268A0A0C4DH90 116 aa8.1□□□□□ -1.11
PTCH1-204ENST00000375290 PPIFP30405 207 aaKnown RBP8.1□□□□□ -1.11
PTCH1-204ENST00000375290 CR1LQ2VPA4 569 aa8.1□□□□□ -1.11
PTCH1-204ENST00000375290 SH2D6Q7Z4S9 175 aa8.1□□□□□ -1.11
PTCH1-204ENST00000375290 ZNF491Q8N8L2 437 aa8.1□□□□□ -1.11
PTCH1-204ENST00000375290 TM2D2Q9BX73 214 aa8.1□□□□□ -1.11
PTCH1-204ENST00000375290 CREBBPQ92793 2442 aa8.1□□□□□ -1.11
PTCH1-204ENST00000375290 POLEQ07864 2286 aa8.1□□□□□ -1.11
PTCH1-204ENST00000375290 C10orf55Q5SWW7 151 aa8.1□□□□□ -1.11
PTCH1-204ENST00000375290 TMEM213A2RRL7 107 aa8.1□□□□□ -1.11
PTCH1-204ENST00000375290 C5orf63A6NC05 138 aa8.1□□□□□ -1.11
PTCH1-204ENST00000375290 TAX1BP3O14907 124 aa8.1□□□□□ -1.11
PTCH1-204ENST00000375290 GP9P14770 177 aa8.1□□□□□ -1.11
PTCH1-204ENST00000375290 IGKV3-20P01619 116 aa8.09□□□□□ -1.11
PTCH1-204ENST00000375290 VSIG2Q96IQ7 327 aa8.09□□□□□ -1.11
PTCH1-204ENST00000375290 LINC01619G3V211 115 aa8.09□□□□□ -1.11
PTCH1-204ENST00000375290 F6UB75 175 aa8.09□□□□□ -1.11
PTCH1-204ENST00000375290 J3QLI3 93 aa8.09□□□□□ -1.11
PTCH1-204ENST00000375290 UQCRQO14949 82 aa8.09□□□□□ -1.11
PTCH1-204ENST00000375290 TOMM6Q96B49 74 aa8.09□□□□□ -1.11
PTCH1-204ENST00000375290 CNOT1A5YKK6 2376 aaKnown RBP8.09□□□□□ -1.11
PTCH1-204ENST00000375290 SYNJ2BPP57105 145 aa8.09□□□□□ -1.11
PTCH1-204ENST00000375290 C1orf159Q96HA4 380 aa8.09□□□□□ -1.11
PTCH1-204ENST00000375290 CDK2AP2O75956 126 aa8.09□□□□□ -1.11
PTCH1-204ENST00000375290 ACACAQ13085 2346 aa8.08□□□□□ -1.12
PTCH1-204ENST00000375290 IGHV3-49A0A0A0MS15 119 aa8.08□□□□□ -1.12
PTCH1-204ENST00000375290 TRBV10-2A0A0K0K1G8 114 aa8.08□□□□□ -1.12
PTCH1-204ENST00000375290 KNCNA6PVL3 124 aa8.08□□□□□ -1.12
PTCH1-204ENST00000375290 LINC00643Q86TS7 51 aa8.08□□□□□ -1.12
PTCH1-204ENST00000375290 SLC25A29Q8N8R3 303 aa8.08□□□□□ -1.12
PTCH1-204ENST00000375290 RNASE8Q8TDE3 154 aaKnown RBP8.08□□□□□ -1.12
PTCH1-204ENST00000375290 NPBQ8NG41 125 aa8.08□□□□□ -1.12
PTCH1-204ENST00000375290 METRNQ9UJH8 293 aa8.08□□□□□ -1.12
PTCH1-204ENST00000375290 SPTAN1Q13813 2472 aaKnown RBP8.08□□□□□ -1.12
PTCH1-204ENST00000375290 A0A1B0GUS0 222 aa8.08□□□□□ -1.12
PTCH1-204ENST00000375290 TRGV1A0A0A0MS02 117 aa8.07□□□□□ -1.12
PTCH1-204ENST00000375290 IGHV3-64A0A075B6Q5 118 aa8.07□□□□□ -1.12
PTCH1-204ENST00000375290 LHBP01229 141 aa8.07□□□□□ -1.12
PTCH1-204ENST00000375290 RSPO1Q2MKA7 263 aaPredicted RBP8.07□□□□□ -1.12
PTCH1-204ENST00000375290 DAZ2Q13117 558 aaKnown RBP8.07□□□□□ -1.12
PTCH1-204ENST00000375290 DAZ4Q86SG3 579 aaKnown RBP8.07□□□□□ -1.12
PTCH1-204ENST00000375290 DAZ3Q9NR90 486 aaKnown RBP8.07□□□□□ -1.12
PTCH1-204ENST00000375290 ICOSQ9Y6W8 199 aa8.07□□□□□ -1.12
PTCH1-204ENST00000375290 PRSS29PA6NIE9 313 aa8.07□□□□□ -1.12
PTCH1-204ENST00000375290 NTN5Q8WTR8 489 aaPredicted RBP8.07□□□□□ -1.12
PTCH1-204ENST00000375290 B5MCH6 92 aa8.07□□□□□ -1.12
PTCH1-204ENST00000375290 NCOA6Q14686 2063 aaPredicted RBP8.07□□□□□ -1.12
PTCH1-204ENST00000375290 S4R3C0 116 aa8.07□□□□□ -1.12
PTCH1-204ENST00000375290 A0A0J9YXY3 114 aa8.07□□□□□ -1.12
PTCH1-204ENST00000375290 TMEM243Q9BU79 118 aa8.07□□□□□ -1.12
PTCH1-204ENST00000375290 A0A1B0GXF2 115 aa8.06□□□□□ -1.12
PTCH1-204ENST00000375290 DKK2Q9UBU2 259 aa8.06□□□□□ -1.12
PTCH1-204ENST00000375290 YPEL4Q96NS1 127 aa8.06□□□□□ -1.12
PTCH1-204ENST00000375290 CACNA1BQ00975 2339 aa8.06□□□□□ -1.12
PTCH1-204ENST00000375290 SMKR1H3BMG3 65 aa8.06□□□□□ -1.12
PTCH1-204ENST00000375290 NDUFC1O43677 76 aa8.06□□□□□ -1.12
PTCH1-204ENST00000375290 ANKRD39Q53RE8 183 aa8.06□□□□□ -1.12
PTCH1-204ENST00000375290 PINLYPA6NC86 204 aa8.06□□□□□ -1.12
PTCH1-204ENST00000375290 C8orf49Q96NF6 230 aa8.06□□□□□ -1.12
PTCH1-204ENST00000375290 TRIOBPQ9H2D6 2365 aa8.06□□□□□ -1.12
PTCH1-204ENST00000375290 C2orf70A6NJV1 201 aa8.06□□□□□ -1.12
PTCH1-204ENST00000375290 LINC01620Q4KN68 170 aa8.06□□□□□ -1.12
PTCH1-204ENST00000375290 RNF144BQ7Z419 303 aa8.06□□□□□ -1.12
PTCH1-204ENST00000375290 LINC01560Q8TB33 94 aa8.06□□□□□ -1.12
PTCH1-204ENST00000375290 FSTL3O95633 263 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms