RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 ERCC8Q13216 396 aa7.82□□□□□ -1.16
TPM3-209ENST00000368527 APRG1Q8IVJ8 170 aa7.82□□□□□ -1.16
TPM3-209ENST00000368527 RNF182Q8N6D2 247 aa7.82□□□□□ -1.16
TPM3-209ENST00000368527 Q8N8P6 123 aa7.82□□□□□ -1.16
TPM3-209ENST00000368527 LINC01356Q8N9X3 169 aa7.82□□□□□ -1.16
TPM3-209ENST00000368527 IFI27L1Q96BM0 104 aa7.82□□□□□ -1.16
TPM3-209ENST00000368527 RNF185Q96GF1 192 aa7.82□□□□□ -1.16
TPM3-209ENST00000368527 TMEM208Q9BTX3 173 aa7.82□□□□□ -1.16
TPM3-209ENST00000368527 DAZ1Q9NQZ3 744 aaKnown RBP7.82□□□□□ -1.16
TPM3-209ENST00000368527 UFC1Q9Y3C8 167 aa7.82□□□□□ -1.16
TPM3-209ENST00000368527 ABCA1O95477 2261 aa7.82□□□□□ -1.16
TPM3-209ENST00000368527 IGSF10Q6WRI0 2623 aa7.82□□□□□ -1.16
TPM3-209ENST00000368527 HIVEP3Q5T1R4 2406 aa7.81□□□□□ -1.16
TPM3-209ENST00000368527 IGHV4-30-2A0A087WSY4 118 aa7.81□□□□□ -1.16
TPM3-209ENST00000368527 TNFRSF6BO95407 300 aa7.81□□□□□ -1.16
TPM3-209ENST00000368527 IGHV4-38-2P0DP08 117 aa7.81□□□□□ -1.16
TPM3-209ENST00000368527 PF4V1P10720 104 aa7.81□□□□□ -1.16
TPM3-209ENST00000368527 IGFL4Q6B9Z1 124 aa7.81□□□□□ -1.16
TPM3-209ENST00000368527 BRD3OSQ6XYD6 125 aa7.81□□□□□ -1.16
TPM3-209ENST00000368527 LINC00173Q6ZV60 143 aa7.81□□□□□ -1.16
TPM3-209ENST00000368527 Q71RC1 249 aaPredicted RBP7.81□□□□□ -1.16
TPM3-209ENST00000368527 GPHB5Q86YW7 130 aa7.81□□□□□ -1.16
TPM3-209ENST00000368527 OR4X2Q8NGF9 303 aa7.81□□□□□ -1.16
TPM3-209ENST00000368527 OR9G4Q8NGQ1 327 aa7.81□□□□□ -1.16
TPM3-209ENST00000368527 ARHGAP32A7KAX9 2087 aa7.8□□□□□ -1.16
TPM3-209ENST00000368527 A0A096LNJ9 63 aa7.8□□□□□ -1.16
TPM3-209ENST00000368527 IGKV3D-20A0A0C4DH25 116 aa7.8□□□□□ -1.16
TPM3-209ENST00000368527 LOC389332A0A1B0GUA5 103 aa7.8□□□□□ -1.16
TPM3-209ENST00000368527 SOCS3O14543 225 aa7.8□□□□□ -1.16
TPM3-209ENST00000368527 NPYP01303 97 aa7.8□□□□□ -1.16
TPM3-209ENST00000368527 ASIPP42127 132 aa7.8□□□□□ -1.16
TPM3-209ENST00000368527 CFHR3Q02985 330 aa7.8□□□□□ -1.16
TPM3-209ENST00000368527 KIR3DS1Q14943 382 aa7.8□□□□□ -1.16
TPM3-209ENST00000368527 SPANXN1Q5VSR9 72 aa7.8□□□□□ -1.16
TPM3-209ENST00000368527 OR2K2Q8NGT1 345 aa7.8□□□□□ -1.16
TPM3-209ENST00000368527 ODF3Q96PU9 254 aa7.8□□□□□ -1.16
TPM3-209ENST00000368527 PEF1Q9UBV8 284 aaKnown RBP7.8□□□□□ -1.16
TPM3-209ENST00000368527 ADGRG4Q8IZF6 3080 aa7.8□□□□□ -1.16
TPM3-209ENST00000368527 IGHV3OR16-10A0A075B7F0 116 aa7.79□□□□□ -1.16
TPM3-209ENST00000368527 IGHV3OR16-8A0A075B7F1 116 aa7.79□□□□□ -1.16
TPM3-209ENST00000368527 IGHV3-66A0A0C4DH42 116 aa7.79□□□□□ -1.16
TPM3-209ENST00000368527 M0R381 172 aa7.79□□□□□ -1.16
TPM3-209ENST00000368527 HLA-DRB4P13762 266 aa7.79□□□□□ -1.16
TPM3-209ENST00000368527 SEC11AP67812 179 aa7.79□□□□□ -1.16
TPM3-209ENST00000368527 MAJINQ3KP22 176 aa7.79□□□□□ -1.16
TPM3-209ENST00000368527 PRSS57Q6UWY2 283 aa7.79□□□□□ -1.16
TPM3-209ENST00000368527 ZNF575Q86XF7 245 aa7.79□□□□□ -1.16
TPM3-209ENST00000368527 TEX29Q8N6K0 151 aa7.79□□□□□ -1.16
TPM3-209ENST00000368527 STPG4Q8N801 248 aa7.79□□□□□ -1.16
TPM3-209ENST00000368527 OR8A1Q8NGG7 326 aa7.79□□□□□ -1.16
TPM3-209ENST00000368527 FAM19A4Q96LR4 140 aa7.79□□□□□ -1.16
TPM3-209ENST00000368527 C20orf78Q9BR46 151 aa7.79□□□□□ -1.16
TPM3-209ENST00000368527 HLA-DRB4X5D2U9 266 aa7.79□□□□□ -1.16
TPM3-209ENST00000368527 FLNBO75369 2602 aaKnown RBP7.78□□□□□ -1.16
TPM3-209ENST00000368527 hDV102S1A0JD36 115 aa7.78□□□□□ -1.16
TPM3-209ENST00000368527 ZNF207O43670 478 aaKnown RBP7.78□□□□□ -1.16
TPM3-209ENST00000368527 COX6B1P14854 86 aa7.78□□□□□ -1.16
TPM3-209ENST00000368527 HINT1P49773 126 aaPredicted RBP7.78□□□□□ -1.16
TPM3-209ENST00000368527 SRSF1Q07955 248 aaKnown RBP eCLIP7.78□□□□□ -1.162e-7■□□□□ 8.7
TPM3-209ENST00000368527 LOXL1Q08397 574 aaPredicted RBP7.78□□□□□ -1.16
TPM3-209ENST00000368527 LAGE3Q14657 143 aa7.78□□□□□ -1.16
TPM3-209ENST00000368527 ZNF124Q15973 351 aa7.78□□□□□ -1.16
TPM3-209ENST00000368527 LY6EQ16553 131 aa7.78□□□□□ -1.16
TPM3-209ENST00000368527 ORMDL2Q53FV1 153 aa7.78□□□□□ -1.16
TPM3-209ENST00000368527 RHPN1-AS1Q9BWJ2 59 aa7.78□□□□□ -1.16
TPM3-209ENST00000368527 COX11Q9Y6N1 276 aa7.78□□□□□ -1.16
TPM3-209ENST00000368527 HELZ2Q9BYK8 2649 aaKnown RBP7.78□□□□□ -1.16
TPM3-209ENST00000368527 SPTBN1Q01082 2364 aaKnown RBP7.77□□□□□ -1.17
TPM3-209ENST00000368527 CD5LO43866 347 aa7.77□□□□□ -1.17
TPM3-209ENST00000368527 ELANEP08246 267 aa7.77□□□□□ -1.17
TPM3-209ENST00000368527 S100A4P26447 101 aaKnown RBP7.77□□□□□ -1.17
TPM3-209ENST00000368527 LEPP41159 167 aa7.77□□□□□ -1.17
TPM3-209ENST00000368527 ZFAND2AQ8N6M9 145 aa7.77□□□□□ -1.17
TPM3-209ENST00000368527 MYOZ3Q8TDC0 251 aa7.77□□□□□ -1.17
TPM3-209ENST00000368527 DPH3P1Q9H4G8 78 aa7.77□□□□□ -1.17
TPM3-209ENST00000368527 C11orf21Q9P2W6 132 aa7.77□□□□□ -1.17
TPM3-209ENST00000368527 NBASA2RRP1 2371 aa7.76□□□□□ -1.17
TPM3-209ENST00000368527 HRNRQ86YZ3 2850 aaPredicted RBP7.76□□□□□ -1.17
TPM3-209ENST00000368527 IGHV3OR16-13A0A075B7E8 117 aa7.76□□□□□ -1.17
TPM3-209ENST00000368527 IGHV3-49A0A0A0MS15 119 aa7.76□□□□□ -1.17
TPM3-209ENST00000368527 IGHV3-74A0A0B4J1X5 117 aa7.76□□□□□ -1.17
TPM3-209ENST00000368527 H0Y8G0 127 aa7.76□□□□□ -1.17
TPM3-209ENST00000368527 SMAD7O15105 426 aaKnown RBP7.76□□□□□ -1.17
TPM3-209ENST00000368527 NCR2O95944 276 aa7.76□□□□□ -1.17
TPM3-209ENST00000368527 PSMB8P28062 276 aa7.76□□□□□ -1.17
TPM3-209ENST00000368527 RPL32P62910 135 aaKnown RBP7.76□□□□□ -1.17
TPM3-209ENST00000368527 TM4SF20Q53R12 229 aa7.76□□□□□ -1.17
TPM3-209ENST00000368527 BVES-AS1Q5T3Y7 98 aa7.76□□□□□ -1.17
TPM3-209ENST00000368527 UNQ9165/PRO28630Q6UXU0 137 aa7.76□□□□□ -1.17
TPM3-209ENST00000368527 BOD1L2Q8IYS8 172 aa7.76□□□□□ -1.17
TPM3-209ENST00000368527 LRRC75A-AS1Q8N1F1 130 aa7.76□□□□□ -1.17
TPM3-209ENST00000368527 AP1S3Q96PC3 154 aa7.76□□□□□ -1.17
TPM3-209ENST00000368527 BBC3Q96PG8 261 aaPredicted RBP7.76□□□□□ -1.17
TPM3-209ENST00000368527 BEX4Q9NWD9 120 aaPredicted RBP7.76□□□□□ -1.17
TPM3-209ENST00000368527 PHLDA3Q9Y5J5 127 aa7.76□□□□□ -1.17
TPM3-209ENST00000368527 TIMM8BQ9Y5J9 83 aaPredicted RBP7.76□□□□□ -1.17
TPM3-209ENST00000368527 KALRNO60229 2985 aa7.76□□□□□ -1.17
TPM3-209ENST00000368527 COL6A6A6NMZ7 2263 aa7.76□□□□□ -1.17
TPM3-209ENST00000368527 IGLV2-18A0A075B6J9 118 aa7.75□□□□□ -1.17
TPM3-209ENST00000368527 A6NDN8 102 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms