RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 TMEM78Q5T7P6 136 aa10.19□□□□□ -0.78
CDC42-202ENST00000344548 OR4B1Q8NGF8 309 aa10.19□□□□□ -0.78
CDC42-202ENST00000344548 F8P00451 2351 aa10.18□□□□□ -0.78
CDC42-202ENST00000344548 F2Z2F3 143 aa10.18□□□□□ -0.78
CDC42-202ENST00000344548 ZNF688P0C7X2 276 aa10.18□□□□□ -0.78
CDC42-202ENST00000344548 WFDC12Q8WWY7 111 aa10.18□□□□□ -0.78
CDC42-202ENST00000344548 DPF1Q92782 380 aa10.18□□□□□ -0.78
CDC42-202ENST00000344548 XKRY2A2RUG3 117 aa10.18□□□□□ -0.78
CDC42-202ENST00000344548 NUPR1O60356 82 aa10.18□□□□□ -0.78
CDC42-202ENST00000344548 ARMS2P0C7Q2 107 aa10.18□□□□□ -0.78
CDC42-202ENST00000344548 CD33P20138 364 aa10.18□□□□□ -0.78
CDC42-202ENST00000344548 FOXA3P55318 350 aaPredicted RBP10.18□□□□□ -0.78
CDC42-202ENST00000344548 KRTAP10-3P60369 221 aa10.18□□□□□ -0.78
CDC42-202ENST00000344548 HIST1H1AQ02539 215 aaPredicted RBP10.18□□□□□ -0.78
CDC42-202ENST00000344548 RBPMS2Q6ZRY4 209 aaKnown RBP10.18□□□□□ -0.78
CDC42-202ENST00000344548 OR9G4Q8NGQ1 327 aa10.18□□□□□ -0.78
CDC42-202ENST00000344548 TPPP3Q9BW30 176 aa10.18□□□□□ -0.78
CDC42-202ENST00000344548 GFRA4Q9GZZ7 299 aa10.18□□□□□ -0.78
CDC42-202ENST00000344548 TP53TG3Q9ULZ0 132 aa10.18□□□□□ -0.78
CDC42-202ENST00000344548 FBLL1A6NHQ2 334 aaKnown RBP10.17□□□□□ -0.78
CDC42-202ENST00000344548 ZFAND2AQ8N6M9 145 aa10.17□□□□□ -0.78
CDC42-202ENST00000344548 OR8A1Q8NGG7 326 aa10.17□□□□□ -0.78
CDC42-202ENST00000344548 IGKV3D-20A0A0C4DH25 116 aa10.17□□□□□ -0.78
CDC42-202ENST00000344548 TMEM189A5PLL7 270 aa10.17□□□□□ -0.78
CDC42-202ENST00000344548 K7EQG2 157 aa10.17□□□□□ -0.78
CDC42-202ENST00000344548 CSN3P07498 182 aa10.17□□□□□ -0.78
CDC42-202ENST00000344548 HIST3H2BBQ8N257 126 aa10.17□□□□□ -0.78
CDC42-202ENST00000344548 TMEM256Q8N2U0 113 aa10.17□□□□□ -0.78
CDC42-202ENST00000344548 NDFIP1Q9BT67 221 aa10.17□□□□□ -0.78
CDC42-202ENST00000344548 CYSRT1A8MQ03 144 aa10.16□□□□□ -0.78
CDC42-202ENST00000344548 PROK1P58294 105 aa10.16□□□□□ -0.78
CDC42-202ENST00000344548 SCGB2A2Q13296 93 aa10.16□□□□□ -0.78
CDC42-202ENST00000344548 PSMG4Q5JS54 123 aa10.16□□□□□ -0.78
CDC42-202ENST00000344548 CLEC5AQ9NY25 188 aa10.16□□□□□ -0.78
CDC42-202ENST00000344548 RNF114Q9Y508 228 aa10.16□□□□□ -0.78
CDC42-202ENST00000344548 FABP5P3A8MUU1 101 aa10.16□□□□□ -0.78
CDC42-202ENST00000344548 ORM1P02763 201 aa10.16□□□□□ -0.78
CDC42-202ENST00000344548 LINC00310P59036 64 aa10.16□□□□□ -0.78
CDC42-202ENST00000344548 PPP1R14DQ9NXH3 145 aa10.16□□□□□ -0.78
CDC42-202ENST00000344548 JMJD1CQ15652 2540 aa10.15□□□□□ -0.78
CDC42-202ENST00000344548 FAM231BA6NCW3 169 aa10.15□□□□□ -0.78
CDC42-202ENST00000344548 ADARB2-AS1A8MUL3 147 aa10.15□□□□□ -0.78
CDC42-202ENST00000344548 OVOL1O14753 267 aa10.15□□□□□ -0.78
CDC42-202ENST00000344548 FHL3Q13643 280 aa10.15□□□□□ -0.78
CDC42-202ENST00000344548 LYZL1Q6UWQ5 148 aa10.15□□□□□ -0.78
CDC42-202ENST00000344548 TMEM61Q8N0U2 210 aa10.15□□□□□ -0.78
CDC42-202ENST00000344548 OR10J6PQ8NGY7 276 aa10.15□□□□□ -0.78
CDC42-202ENST00000344548 FAM19A4Q96LR4 140 aa10.15□□□□□ -0.78
CDC42-202ENST00000344548 TENM1Q9UKZ4 2725 aa10.15□□□□□ -0.79
CDC42-202ENST00000344548 CCL24O00175 119 aa10.14□□□□□ -0.79
CDC42-202ENST00000344548 LINC00477Q96M19 166 aa10.14□□□□□ -0.79
CDC42-202ENST00000344548 BAHCC1Q9P281 2608 aa10.14□□□□□ -0.79
CDC42-202ENST00000344548 BMI1P35226 326 aa10.14□□□□□ -0.79
CDC42-202ENST00000344548 HBBP68871 147 aa10.14□□□□□ -0.79
CDC42-202ENST00000344548 ZNF124Q15973 351 aa10.14□□□□□ -0.79
CDC42-202ENST00000344548 COA6Q5JTJ3 125 aaKnown RBP10.14□□□□□ -0.79
CDC42-202ENST00000344548 WDR73Q6P4I2 378 aa10.14□□□□□ -0.79
CDC42-202ENST00000344548 IGKV3-20P01619 116 aa10.13□□□□□ -0.79
CDC42-202ENST00000344548 HLA-DQA1P01909 254 aa10.13□□□□□ -0.79
CDC42-202ENST00000344548 APCSP02743 223 aa10.13□□□□□ -0.79
CDC42-202ENST00000344548 ATP5L2Q7Z4Y8 100 aa10.13□□□□□ -0.79
CDC42-202ENST00000344548 NDUFA7O95182 113 aa10.13□□□□□ -0.79
CDC42-202ENST00000344548 MT-ND6P03923 174 aa10.13□□□□□ -0.79
CDC42-202ENST00000344548 IGLC6P0CF74 106 aa10.13□□□□□ -0.79
CDC42-202ENST00000344548 SRIP30626 198 aa10.13□□□□□ -0.79
CDC42-202ENST00000344548 RASL11AQ6T310 242 aa10.13□□□□□ -0.79
CDC42-202ENST00000344548 MSRB1Q9NZV6 116 aa10.13□□□□□ -0.79
CDC42-202ENST00000344548 TSSC4Q9Y5U2 329 aaPredicted RBP10.13□□□□□ -0.79
CDC42-202ENST00000344548 A0A1B0GUT8 65 aa10.12□□□□□ -0.79
CDC42-202ENST00000344548 SPRY2O43597 315 aa10.12□□□□□ -0.79
CDC42-202ENST00000344548 ID1P41134 155 aa10.12□□□□□ -0.79
CDC42-202ENST00000344548 LINC01559Q495D7 138 aa10.12□□□□□ -0.79
CDC42-202ENST00000344548 CRISP2P16562 243 aa10.12□□□□□ -0.79
CDC42-202ENST00000344548 DEFB114Q30KQ6 69 aa10.12□□□□□ -0.79
CDC42-202ENST00000344548 CD300EQ496F6 205 aaPredicted RBP10.12□□□□□ -0.79
CDC42-202ENST00000344548 HIST1H2BLQ99880 126 aa10.12□□□□□ -0.79
CDC42-202ENST00000344548 TEP1Q99973 2627 aaKnown RBP10.11□□□□□ -0.79
CDC42-202ENST00000344548 M0QZ24 198 aa10.11□□□□□ -0.79
CDC42-202ENST00000344548 FABP4P15090 132 aa10.11□□□□□ -0.79
CDC42-202ENST00000344548 FOSL1P15407 271 aa10.11□□□□□ -0.79
CDC42-202ENST00000344548 IQCJQ1A5X6 159 aa10.11□□□□□ -0.79
CDC42-202ENST00000344548 RCHY1Q96PM5 261 aa10.11□□□□□ -0.79
CDC42-202ENST00000344548 PEMTQ9UBM1 199 aa10.11□□□□□ -0.79
CDC42-202ENST00000344548 A0A0J9YX75 114 aa10.1□□□□□ -0.79
CDC42-202ENST00000344548 TCF21O43680 179 aa10.1□□□□□ -0.79
CDC42-202ENST00000344548 CRLF1O75462 422 aa10.1□□□□□ -0.79
CDC42-202ENST00000344548 RNASE4P34096 147 aaKnown RBP10.1□□□□□ -0.79
CDC42-202ENST00000344548 NSUN5P1Q3KNT7 163 aa10.1□□□□□ -0.79
CDC42-202ENST00000344548 COX19Q49B96 90 aa10.1□□□□□ -0.79
CDC42-202ENST00000344548 FER1L6-AS1Q8NA97 138 aa10.1□□□□□ -0.79
CDC42-202ENST00000344548 LENEPQ9Y5L5 61 aa10.1□□□□□ -0.79
CDC42-202ENST00000344548 VWFP04275 2813 aa10.1□□□□□ -0.79
CDC42-202ENST00000344548 AMBPP02760 352 aa10.1□□□□□ -0.79
CDC42-202ENST00000344548 GPX1P07203 203 aa10.1□□□□□ -0.79
CDC42-202ENST00000344548 LINC00518Q8N0U6 118 aa10.1□□□□□ -0.79
CDC42-202ENST00000344548 JMJD8Q96S16 334 aa10.1□□□□□ -0.79
CDC42-202ENST00000344548 SERF1AO75920 110 aa10.09□□□□□ -0.79
CDC42-202ENST00000344548 NTF3P20783 257 aa10.09□□□□□ -0.79
CDC42-202ENST00000344548 SNRPD3P62318 126 aaKnown RBP10.09□□□□□ -0.79
CDC42-202ENST00000344548 APRG1Q8IVJ8 170 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 8450.4 ms