RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 TNFSF8P32971 234 aa11.08□□□□□ -0.64
TRA2B-202ENST00000342294 UBE2MP61081 183 aaKnown RBP11.08□□□□□ -0.64
TRA2B-202ENST00000342294 NRARPQ7Z6K4 114 aa11.08□□□□□ -0.64
TRA2B-202ENST00000342294 PFDN5Q99471 154 aa11.08□□□□□ -0.64
TRA2B-202ENST00000342294 TIMM9Q9Y5J7 89 aa11.08□□□□□ -0.64
TRA2B-202ENST00000342294 FABP12A6NFH5 140 aa11.07□□□□□ -0.64
TRA2B-202ENST00000342294 IGLV2-8P01709 118 aa11.07□□□□□ -0.64
TRA2B-202ENST00000342294 MT1HL1P0DM35 61 aa11.07□□□□□ -0.64
TRA2B-202ENST00000342294 GATA1P15976 413 aaPredicted RBP11.07□□□□□ -0.64
TRA2B-202ENST00000342294 ZNF138P52744 262 aa11.07□□□□□ -0.64
TRA2B-202ENST00000342294 AP3S2P59780 193 aa11.07□□□□□ -0.64
TRA2B-202ENST00000342294 RAB31Q13636 194 aa11.07□□□□□ -0.64
TRA2B-202ENST00000342294 ZNF266Q14584 549 aa11.07□□□□□ -0.64
TRA2B-202ENST00000342294 OR10J3Q5JRS4 329 aa11.07□□□□□ -0.64
TRA2B-202ENST00000342294 C12orf45Q8N5I9 185 aaPredicted RBP11.07□□□□□ -0.64
TRA2B-202ENST00000342294 OR4C5Q8NGB2 326 aa11.07□□□□□ -0.64
TRA2B-202ENST00000342294 DYNC2LI1Q8TCX1 351 aa11.07□□□□□ -0.64
TRA2B-202ENST00000342294 C7orf66A4D0T2 115 aa11.06□□□□□ -0.64
TRA2B-202ENST00000342294 RS1O15537 224 aa11.06□□□□□ -0.64
TRA2B-202ENST00000342294 PFN1P07737 140 aaKnown RBP11.06□□□□□ -0.64
TRA2B-202ENST00000342294 SMIM18P0DKX4 95 aa11.06□□□□□ -0.64
TRA2B-202ENST00000342294 PYYP10082 97 aa11.06□□□□□ -0.64
TRA2B-202ENST00000342294 HNRNPA3P51991 378 aaKnown RBP11.06□□□□□ -0.64
TRA2B-202ENST00000342294 TMEM183BQ1AE95 376 aa11.06□□□□□ -0.64
TRA2B-202ENST00000342294 LELP1Q5T871 98 aa11.06□□□□□ -0.64
TRA2B-202ENST00000342294 TMEM183AQ8IXX5 376 aa11.06□□□□□ -0.64
TRA2B-202ENST00000342294 TOMM5Q8N4H5 51 aa11.06□□□□□ -0.64
TRA2B-202ENST00000342294 AAMDCQ9H7C9 122 aa11.06□□□□□ -0.64
TRA2B-202ENST00000342294 SLC39A9Q9NUM3 307 aa11.06□□□□□ -0.64
TRA2B-202ENST00000342294 WDR83OSQ9Y284 106 aa11.06□□□□□ -0.64
TRA2B-202ENST00000342294 SCGB1D2O95969 90 aa11.05□□□□□ -0.64
TRA2B-202ENST00000342294 RPL29P47914 159 aaKnown RBP11.05□□□□□ -0.64
TRA2B-202ENST00000342294 FAM122CQ6P4D5 195 aa11.05□□□□□ -0.64
TRA2B-202ENST00000342294 Q8TAT8 98 aa11.05□□□□□ -0.64
TRA2B-202ENST00000342294 TRGV11A0A075B6L2 103 aa11.04□□□□□ -0.64
TRA2B-202ENST00000342294 IGHV3-16A0A0C4DH30 117 aa11.04□□□□□ -0.64
TRA2B-202ENST00000342294 IAH1Q2TAA2 248 aaPredicted RBP11.04□□□□□ -0.64
TRA2B-202ENST00000342294 ACOT6Q3I5F7 207 aaPredicted RBP11.04□□□□□ -0.64
TRA2B-202ENST00000342294 Q6AWC8 147 aa11.04□□□□□ -0.64
TRA2B-202ENST00000342294 Q8N3U1 123 aa11.04□□□□□ -0.64
TRA2B-202ENST00000342294 DEDD2Q8WXF8 326 aa11.04□□□□□ -0.64
TRA2B-202ENST00000342294 DAZAP1Q96EP5 407 aaKnown RBP11.04□□□□□ -0.64
TRA2B-202ENST00000342294 TRAV8-3A0A0A6YYJ7 113 aa11.03□□□□□ -0.64
TRA2B-202ENST00000342294 M0R2P5 195 aa11.03□□□□□ -0.64
TRA2B-202ENST00000342294 MBPP02686 304 aaPredicted RBP11.03□□□□□ -0.64
TRA2B-202ENST00000342294 SLC25A29Q8N8R3 303 aa11.03□□□□□ -0.64
TRA2B-202ENST00000342294 CHAC2Q8WUX2 184 aa11.03□□□□□ -0.64
TRA2B-202ENST00000342294 BAALCQ8WXS3 180 aa11.03□□□□□ -0.64
TRA2B-202ENST00000342294 RNF222A6NCQ9 220 aa11.02□□□□□ -0.65
TRA2B-202ENST00000342294 RBFOX3A6NFN3 312 aa11.02□□□□□ -0.65
TRA2B-202ENST00000342294 BAK1Q16611 211 aa11.02□□□□□ -0.65
TRA2B-202ENST00000342294 VWC2Q2TAL6 325 aa11.02□□□□□ -0.65
TRA2B-202ENST00000342294 FAM159AQ6UWV7 190 aa11.02□□□□□ -0.65
TRA2B-202ENST00000342294 SLIRPQ9GZT3 109 aaKnown RBP11.02□□□□□ -0.65
TRA2B-202ENST00000342294 PKHD1L1Q86WI1 4243 aa11.01□□□□□ -0.65
TRA2B-202ENST00000342294 IGLV2-11P01706 119 aa11.01□□□□□ -0.65
TRA2B-202ENST00000342294 FAM167A-AS1Q96KT0 104 aa11.01□□□□□ -0.65
TRA2B-202ENST00000342294 SLC25A2Q9BXI2 301 aa11.01□□□□□ -0.65
TRA2B-202ENST00000342294 GTSF1LQ9H1H1 148 aa11.01□□□□□ -0.65
TRA2B-202ENST00000342294 UQCC1Q9NVA1 299 aa11.01□□□□□ -0.65
TRA2B-202ENST00000342294 GSKIPQ9P0R6 139 aa11.01□□□□□ -0.65
TRA2B-202ENST00000342294 RBAKDNA6NC62 111 aa11□□□□□ -0.65
TRA2B-202ENST00000342294 GNRH2O43555 120 aa11□□□□□ -0.65
TRA2B-202ENST00000342294 CST7O76096 145 aa11□□□□□ -0.65
TRA2B-202ENST00000342294 NBEAP1P0C6P0 100 aa11□□□□□ -0.65
TRA2B-202ENST00000342294 RPL37AP61513 92 aaKnown RBP11□□□□□ -0.65
TRA2B-202ENST00000342294 PYDC2Q56P42 97 aa11□□□□□ -0.65
TRA2B-202ENST00000342294 Q8N976 141 aa11□□□□□ -0.65
TRA2B-202ENST00000342294 C20orf85Q9H1P6 137 aa11□□□□□ -0.65
TRA2B-202ENST00000342294 GPN1Q9HCN4 374 aaPredicted RBP11□□□□□ -0.65
TRA2B-202ENST00000342294 RNF213Q63HN8 5207 aa10.99□□□□□ -0.65
TRA2B-202ENST00000342294 LRP2P98164 4655 aa10.99□□□□□ -0.65
TRA2B-202ENST00000342294 TRBV6-4A0A1B0GX49 114 aa10.99□□□□□ -0.65
TRA2B-202ENST00000342294 FBLL1A6NHQ2 334 aaKnown RBP10.99□□□□□ -0.65
TRA2B-202ENST00000342294 GCSAMLQ5JQS6 135 aa10.99□□□□□ -0.65
TRA2B-202ENST00000342294 DAZ4Q86SG3 579 aaKnown RBP10.99□□□□□ -0.65
TRA2B-202ENST00000342294 PRADC1Q9BSG0 188 aa10.99□□□□□ -0.65
TRA2B-202ENST00000342294 C11orf1Q9H5F2 150 aa10.99□□□□□ -0.65
TRA2B-202ENST00000342294 DAZ3Q9NR90 486 aaKnown RBP10.99□□□□□ -0.65
TRA2B-202ENST00000342294 COX11Q9Y6N1 276 aa10.99□□□□□ -0.65
TRA2B-202ENST00000342294 NDUFB6O95139 128 aa10.98□□□□□ -0.65
TRA2B-202ENST00000342294 RHOHQ15669 191 aa10.98□□□□□ -0.65
TRA2B-202ENST00000342294 ATP6V0E2Q8NHE4 81 aa10.98□□□□□ -0.65
TRA2B-202ENST00000342294 FLVCR2Q9UPI3 526 aa10.98□□□□□ -0.65
TRA2B-202ENST00000342294 LENEPQ9Y5L5 61 aa10.98□□□□□ -0.65
TRA2B-202ENST00000342294 V9GYH0 126 aa10.98□□□□□ -0.65
TRA2B-202ENST00000342294 L7N2F9 121 aa10.97□□□□□ -0.65
TRA2B-202ENST00000342294 VAMP2P63027 116 aa10.97□□□□□ -0.65
TRA2B-202ENST00000342294 BAXQ07812 192 aa10.97□□□□□ -0.65
TRA2B-202ENST00000342294 TOR2AQ5JU69 321 aa10.97□□□□□ -0.65
TRA2B-202ENST00000342294 UBE2L5PA0A1B0GUS4 154 aa10.96□□□□□ -0.65
TRA2B-202ENST00000342294 FAM24AA6NFZ4 105 aa10.96□□□□□ -0.65
TRA2B-202ENST00000342294 CIDEAO60543 219 aa10.96□□□□□ -0.65
TRA2B-202ENST00000342294 CFAP126Q5VTH2 177 aa10.96□□□□□ -0.65
TRA2B-202ENST00000342294 FXYD5Q96DB9 178 aa10.96□□□□□ -0.65
TRA2B-202ENST00000342294 PHYHIPLQ96FC7 376 aa10.96□□□□□ -0.65
TRA2B-202ENST00000342294 NAGKQ9UJ70 344 aa10.96□□□□□ -0.65
TRA2B-202ENST00000342294 BCAP31P51572 246 aa10.95□□□□□ -0.66
TRA2B-202ENST00000342294 CAV2P51636 162 aa10.95□□□□□ -0.66
TRA2B-202ENST00000342294 DPPA3Q6W0C5 159 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms