RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 AMTNQ6UX39 209 aa10.76□□□□□ -0.69
SYNE3-201ENST00000334258 Q9UFV3 132 aa10.76□□□□□ -0.69
SYNE3-201ENST00000334258 WI2-2373I1.2A0A1W2PRP0 233 aa10.75□□□□□ -0.69
SYNE3-201ENST00000334258 K7EIM0 57 aa10.75□□□□□ -0.69
SYNE3-201ENST00000334258 PRRG2O14669 202 aa10.75□□□□□ -0.69
SYNE3-201ENST00000334258 ARL3P36405 182 aa10.75□□□□□ -0.69
SYNE3-201ENST00000334258 ATP5J2P56134 94 aa10.75□□□□□ -0.69
SYNE3-201ENST00000334258 IGFL3Q6UXB1 125 aa10.75□□□□□ -0.69
SYNE3-201ENST00000334258 ZNF562Q6V9R5 426 aa10.75□□□□□ -0.69
SYNE3-201ENST00000334258 C8orf31Q8N9H6 132 aa10.75□□□□□ -0.69
SYNE3-201ENST00000334258 SPAG8Q99932 426 aaPredicted RBP10.75□□□□□ -0.69
SYNE3-201ENST00000334258 FAM110AQ9BQ89 295 aa10.75□□□□□ -0.69
SYNE3-201ENST00000334258 UFC1Q9Y3C8 167 aa10.75□□□□□ -0.69
SYNE3-201ENST00000334258 IGSF10Q6WRI0 2623 aa10.75□□□□□ -0.69
SYNE3-201ENST00000334258 TMEM8BA6NDV4 472 aa10.75□□□□□ -0.69
SYNE3-201ENST00000334258 GATA1P15976 413 aaPredicted RBP10.75□□□□□ -0.69
SYNE3-201ENST00000334258 PRR25Q96S07 402 aa10.75□□□□□ -0.69
SYNE3-201ENST00000334258 IGHV3OR16-8A0A075B7F1 116 aa10.74□□□□□ -0.69
SYNE3-201ENST00000334258 OR11H12B2RN74 326 aa10.74□□□□□ -0.69
SYNE3-201ENST00000334258 DPM2O94777 84 aa10.74□□□□□ -0.69
SYNE3-201ENST00000334258 CRYGBP07316 175 aa10.74□□□□□ -0.69
SYNE3-201ENST00000334258 RPL32P62910 135 aaKnown RBP10.74□□□□□ -0.69
SYNE3-201ENST00000334258 IGF2-ASQ6U949 168 aa10.74□□□□□ -0.69
SYNE3-201ENST00000334258 OR11H1Q8NG94 326 aa10.74□□□□□ -0.69
SYNE3-201ENST00000334258 OR11H2Q8NH07 326 aa10.74□□□□□ -0.69
SYNE3-201ENST00000334258 TMEM158Q8WZ71 300 aa10.74□□□□□ -0.69
SYNE3-201ENST00000334258 POLQO75417 2590 aa10.74□□□□□ -0.69
SYNE3-201ENST00000334258 TRAV40A0A0B4J280 105 aa10.74□□□□□ -0.69
SYNE3-201ENST00000334258 CEND1Q8N111 149 aa10.74□□□□□ -0.69
SYNE3-201ENST00000334258 ARPC1AQ92747 370 aa10.74□□□□□ -0.69
SYNE3-201ENST00000334258 HIST1H4GQ99525 98 aa10.74□□□□□ -0.69
SYNE3-201ENST00000334258 SPATA25Q9BR10 227 aa10.74□□□□□ -0.69
SYNE3-201ENST00000334258 HHLA3Q9XRX5 114 aa10.74□□□□□ -0.69
SYNE3-201ENST00000334258 ZFHX3Q15911 3703 aa10.74□□□□□ -0.69
SYNE3-201ENST00000334258 TNFRSF6BO95407 300 aa10.73□□□□□ -0.69
SYNE3-201ENST00000334258 SPINK8P0C7L1 97 aa10.73□□□□□ -0.69
SYNE3-201ENST00000334258 GRNP28799 593 aaKnown RBP10.73□□□□□ -0.69
SYNE3-201ENST00000334258 BSPH1Q075Z2 132 aa10.73□□□□□ -0.69
SYNE3-201ENST00000334258 IGHV3-23P01764 117 aa10.73□□□□□ -0.69
SYNE3-201ENST00000334258 ZNF80P51504 273 aaPredicted RBP10.73□□□□□ -0.69
SYNE3-201ENST00000334258 PAX8Q06710 450 aa10.73□□□□□ -0.69
SYNE3-201ENST00000334258 C3orf36Q3SXR2 165 aa10.73□□□□□ -0.69
SYNE3-201ENST00000334258 NXT2Q9NPJ8 142 aaKnown RBP10.73□□□□□ -0.69
SYNE3-201ENST00000334258 HIGD1BQ9P298 99 aa10.73□□□□□ -0.69
SYNE3-201ENST00000334258 IGHV3-35A0A0C4DH35 117 aa10.73□□□□□ -0.69
SYNE3-201ENST00000334258 DLX6P56179 175 aa10.73□□□□□ -0.69
SYNE3-201ENST00000334258 FAM90A27PA6NNH2 459 aa10.72□□□□□ -0.69
SYNE3-201ENST00000334258 BUB1B-PAK6H3BSN5 160 aa10.72□□□□□ -0.69
SYNE3-201ENST00000334258 IGLL5B9A064 214 aa10.72□□□□□ -0.69
SYNE3-201ENST00000334258 F8W1H4 67 aa10.72□□□□□ -0.69
SYNE3-201ENST00000334258 SCGB2A1O75556 95 aa10.72□□□□□ -0.69
SYNE3-201ENST00000334258 HES1Q14469 280 aa10.72□□□□□ -0.69
SYNE3-201ENST00000334258 PSMG4Q5JS54 123 aa10.72□□□□□ -0.69
SYNE3-201ENST00000334258 FOXI2Q6ZQN5 318 aa10.72□□□□□ -0.69
SYNE3-201ENST00000334258 NUP37Q8NFH4 326 aa10.72□□□□□ -0.69
SYNE3-201ENST00000334258 FAM57AQ8TBR7 257 aa10.72□□□□□ -0.69
SYNE3-201ENST00000334258 C20orf78Q9BR46 151 aa10.72□□□□□ -0.69
SYNE3-201ENST00000334258 ANAPC13Q9BS18 74 aa10.72□□□□□ -0.69
SYNE3-201ENST00000334258 K7ENP7 123 aa10.71□□□□□ -0.69
SYNE3-201ENST00000334258 MYOZ3Q8TDC0 251 aa10.71□□□□□ -0.69
SYNE3-201ENST00000334258 IGFBPL1Q8WX77 278 aa10.71□□□□□ -0.69
SYNE3-201ENST00000334258 SPANXB1Q9NS25 103 aaPredicted RBP10.71□□□□□ -0.69
SYNE3-201ENST00000334258 MRPL35Q9NZE8 188 aaKnown RBP10.71□□□□□ -0.69
SYNE3-201ENST00000334258 LRRK2Q5S007 2527 aa10.71□□□□□ -0.69
SYNE3-201ENST00000334258 CELSR2Q9HCU4 2923 aa10.71□□□□□ -0.69
SYNE3-201ENST00000334258 C16orf97H3BN30 126 aa10.71□□□□□ -0.69
SYNE3-201ENST00000334258 HLA-DMBP28068 263 aa10.71□□□□□ -0.69
SYNE3-201ENST00000334258 PDE6HQ13956 83 aa10.71□□□□□ -0.69
SYNE3-201ENST00000334258 TTC9CQ8N5M4 171 aa10.71□□□□□ -0.69
SYNE3-201ENST00000334258 TNFRSF18Q9Y5U5 241 aa10.71□□□□□ -0.69
SYNE3-201ENST00000334258 NDUFA3O95167 84 aa10.71□□□□□ -0.7
SYNE3-201ENST00000334258 GAGE5Q13069 117 aa10.71□□□□□ -0.7
SYNE3-201ENST00000334258 GAGE6Q13070 117 aa10.71□□□□□ -0.7
SYNE3-201ENST00000334258 LCNL1Q6ZST4 164 aa10.71□□□□□ -0.7
SYNE3-201ENST00000334258 ZNF418Q8TF45 676 aaPredicted RBP10.71□□□□□ -0.7
SYNE3-201ENST00000334258 ARHGAP32A7KAX9 2087 aa10.7□□□□□ -0.7
SYNE3-201ENST00000334258 AGRNO00468 2067 aa10.7□□□□□ -0.7
SYNE3-201ENST00000334258 MRPS12O15235 138 aaKnown RBP10.7□□□□□ -0.7
SYNE3-201ENST00000334258 ATP5LO75964 103 aa10.7□□□□□ -0.7
SYNE3-201ENST00000334258 MT-ATP8P03928 68 aa10.7□□□□□ -0.7
SYNE3-201ENST00000334258 RPL7P18124 248 aaKnown RBP10.7□□□□□ -0.7
SYNE3-201ENST00000334258 GAGE13Q4V321 117 aa10.7□□□□□ -0.7
SYNE3-201ENST00000334258 LINC01560Q8TB33 94 aa10.7□□□□□ -0.7
SYNE3-201ENST00000334258 E9PLD3 99 aa10.7□□□□□ -0.7
SYNE3-201ENST00000334258 TIMM23O14925 209 aa10.7□□□□□ -0.7
SYNE3-201ENST00000334258 CDSNQ15517 529 aa10.7□□□□□ -0.7
SYNE3-201ENST00000334258 C12orf74Q32Q52 190 aa10.7□□□□□ -0.7
SYNE3-201ENST00000334258 PHLDA1Q8WV24 401 aaPredicted RBP10.7□□□□□ -0.7
SYNE3-201ENST00000334258 RNF185Q96GF1 192 aa10.7□□□□□ -0.7
SYNE3-201ENST00000334258 USP9XQ93008 2570 aaPredicted RBP10.7□□□□□ -0.7
SYNE3-201ENST00000334258 A0A1B0GWB2 263 aa10.69□□□□□ -0.7
SYNE3-201ENST00000334258 IGLV1-47P01700 117 aa10.69□□□□□ -0.7
SYNE3-201ENST00000334258 MFAP4P55083 255 aa10.69□□□□□ -0.7
SYNE3-201ENST00000334258 MAPKAPK5-AS1Q8N8E1 139 aa10.69□□□□□ -0.7
SYNE3-201ENST00000334258 TMEM190Q8WZ59 177 aa10.69□□□□□ -0.7
SYNE3-201ENST00000334258 TM2D2Q9BX73 214 aa10.69□□□□□ -0.7
SYNE3-201ENST00000334258 FABP5P3A8MUU1 101 aa10.69□□□□□ -0.7
SYNE3-201ENST00000334258 LYNX1G3V0Z9 82 aa10.69□□□□□ -0.7
SYNE3-201ENST00000334258 LYNX1P0DP58 116 aa10.69□□□□□ -0.7
SYNE3-201ENST00000334258 RAB1BQ9H0U4 201 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms